| Literature DB >> 21202032 |
Jian Wu1.
Abstract
The title compound, [Zn(3)(C(6)H(5)O(7))(2)(H(2)O)(2)](n), is a polymer in which the repeating unit contains three zinc atoms, two hepta-dentate Hcit ligands (Hcit = citric acid trianion) and two coordinated water mol-ecules, only half of which are independent due to one of the metal atoms lying on a centre of symmetry. The two independent cations both exhibit an octa-hedral geometry, but the way in which they are coordinate are different; while the Zn atom in a general position is bound to three Hcit ligands and one water mol-ecule, the one at the centre of symmetry is coordinated by six O atoms from two symmetry-related Hcit ligands through the (protonated) hydroxyl and carboxyl-ate groups. The three carboxyl-ate groups coordinate to the Zn centres in three different ways, viz. chelating, bridging and a mixture of both, in an unusual coordination mode for citrate. The result is a two-dimensional structure parallel to (010), built up by a square-grid motif. Intermolecular O-H⋯O hydrogen bonds are present in the crystal structure.Entities:
Year: 2008 PMID: 21202032 PMCID: PMC2960923 DOI: 10.1107/S1600536808007642
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn3(C6H5O7)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1749 reflections |
| θ = 2.5–26.0º | |
| µ = 4.09 mm−1 | |
| β = 102.7910 (10)º | Block, colourless |
| 0.20 × 0.18 × 0.18 mm | |
| Bruker APEXII area-detector diffractometer | 1749 independent reflections |
| Radiation source: fine-focus sealed tube | 1694 reflections with |
| Monochromator: graphite | |
| θmax = 26.0º | |
| φ and ω scan | θmin = 2.5º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 2004) | |
| 4693 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 1648 reflections | Δρmax = 1.18 e Å−3 |
| 143 parameters | Δρmin = −1.06 e Å−3 |
| 1 restraint | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.021 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.5000 | 0.0000 | 1.0000 | 0.0150 (5) | |
| Zn2 | 0.11561 (9) | 0.09674 (4) | 0.31681 (6) | 0.0129 (5) | |
| O1W | −0.1974 (13) | 0.0915 (4) | 0.4010 (8) | 0.0543 (17) | |
| H1WA | −0.2908 | 0.0542 | 0.3686 | 0.081* | |
| H1WB | −0.1748 | 0.0841 | 0.4860 | 0.081* | |
| O1 | 0.3216 (12) | 0.0872 (4) | 0.5521 (7) | 0.0506 (17) | |
| O2 | 0.3258 (10) | 0.2105 (4) | 0.4410 (7) | 0.0473 (14) | |
| O3 | 0.4296 (10) | 0.1275 (4) | 0.8697 (6) | 0.0427 (13) | |
| H3 | 0.3866 | 0.1764 | 0.8859 | 0.064* | |
| O4 | 0.8310 (11) | 0.0722 (5) | 1.0802 (7) | 0.0504 (16) | |
| O5 | 1.0418 (12) | 0.1871 (5) | 1.1333 (7) | 0.0566 (19) | |
| O6 | 0.8360 (11) | 0.0532 (4) | 0.6858 (6) | 0.0471 (15) | |
| O7 | 0.6177 (11) | −0.0177 (4) | 0.7974 (7) | 0.0464 (15) | |
| C1 | 0.3868 (13) | 0.1633 (5) | 0.5492 (8) | 0.0383 (17) | |
| C2 | 0.5471 (15) | 0.2027 (5) | 0.6762 (9) | 0.0408 (19) | |
| H2A | 0.4776 | 0.2546 | 0.7046 | 0.049* | |
| H2B | 0.6825 | 0.2210 | 0.6478 | 0.049* | |
| C3 | 0.6146 (12) | 0.1423 (6) | 0.8041 (8) | 0.0349 (17) | |
| C4 | 0.8172 (15) | 0.1853 (6) | 0.9036 (9) | 0.0419 (19) | |
| H4A | 0.9423 | 0.1854 | 0.8574 | 0.050* | |
| H4B | 0.7793 | 0.2458 | 0.9168 | 0.050* | |
| C5 | 0.8961 (12) | 0.1437 (5) | 1.0478 (8) | 0.0356 (16) | |
| C6 | 0.6918 (13) | 0.0533 (5) | 0.7569 (8) | 0.0360 (17) |
| Zn1 | 0.0192 (7) | 0.0147 (7) | 0.0113 (7) | −0.0059 (3) | 0.0041 (4) | 0.0027 (3) |
| Zn2 | 0.0151 (6) | 0.0123 (6) | 0.0095 (6) | 0.0008 (2) | −0.0014 (4) | 0.0000 (2) |
| O1W | 0.066 (4) | 0.056 (4) | 0.044 (4) | −0.001 (3) | 0.018 (3) | −0.004 (3) |
| O1 | 0.061 (4) | 0.038 (3) | 0.044 (4) | −0.009 (3) | −0.008 (3) | 0.005 (3) |
| O2 | 0.054 (4) | 0.047 (3) | 0.036 (3) | −0.007 (3) | 0.000 (3) | 0.002 (2) |
| O3 | 0.049 (3) | 0.037 (3) | 0.042 (3) | 0.007 (3) | 0.009 (3) | −0.003 (3) |
| O4 | 0.053 (4) | 0.051 (4) | 0.043 (4) | −0.015 (3) | −0.001 (3) | 0.011 (3) |
| O5 | 0.060 (4) | 0.055 (4) | 0.046 (4) | −0.012 (3) | −0.007 (3) | 0.008 (3) |
| O6 | 0.048 (3) | 0.048 (4) | 0.047 (3) | 0.001 (3) | 0.016 (3) | −0.002 (3) |
| O7 | 0.059 (4) | 0.039 (3) | 0.042 (3) | −0.005 (3) | 0.012 (3) | 0.003 (3) |
| C1 | 0.039 (4) | 0.040 (4) | 0.036 (4) | 0.006 (3) | 0.008 (3) | 0.006 (3) |
| C2 | 0.047 (5) | 0.033 (4) | 0.040 (5) | −0.003 (3) | 0.005 (4) | −0.001 (3) |
| C3 | 0.035 (4) | 0.037 (4) | 0.031 (4) | 0.002 (3) | 0.003 (3) | 0.001 (3) |
| C4 | 0.045 (5) | 0.041 (4) | 0.038 (5) | −0.006 (3) | 0.006 (4) | −0.003 (3) |
| C5 | 0.035 (4) | 0.034 (4) | 0.035 (4) | −0.002 (3) | 0.002 (3) | −0.004 (3) |
| C6 | 0.036 (4) | 0.041 (4) | 0.029 (4) | −0.001 (3) | 0.003 (3) | 0.001 (3) |
| Zn1—O7 | 2.270 (6) | O3—H3 | 0.82 |
| Zn1—O7i | 2.270 (6) | O4—C5 | 1.231 (10) |
| Zn1—O4i | 2.285 (6) | O5—C5 | 1.266 (10) |
| Zn1—O4 | 2.285 (6) | O5—Zn2iv | 2.232 (7) |
| Zn1—O3i | 2.319 (6) | O6—C6 | 1.237 (9) |
| Zn1—O3 | 2.319 (6) | O6—Zn2iii | 2.316 (6) |
| Zn2—O5ii | 2.232 (7) | O7—C6 | 1.273 (10) |
| Zn2—O1W | 2.244 (7) | O7—Zn2iii | 2.485 (6) |
| Zn2—O6iii | 2.316 (6) | C1—C2 | 1.526 (11) |
| Zn2—O2 | 2.338 (6) | C2—C3 | 1.538 (11) |
| Zn2—O1 | 2.371 (7) | C2—H2A | 0.9700 |
| Zn2—O7iii | 2.485 (6) | C2—H2B | 0.9700 |
| O1W—H1WA | 0.8200 | C3—C4 | 1.543 (11) |
| O1W—H1WB | 0.8200 | C3—C6 | 1.546 (11) |
| O1—C1 | 1.233 (10) | C4—C5 | 1.526 (11) |
| O2—C1 | 1.268 (10) | C4—H4A | 0.9700 |
| O3—C3 | 1.435 (9) | C4—H4B | 0.9700 |
| O7—Zn1—O7i | 180.000 (1) | C3—O3—H3 | 105.1 |
| O7—Zn1—O4i | 94.0 (2) | Zn1—O3—H3 | 133.7 |
| O7i—Zn1—O4i | 86.0 (2) | C5—O4—Zn1 | 130.9 (5) |
| O7—Zn1—O4 | 86.0 (2) | C5—O5—Zn2iv | 101.2 (5) |
| O7i—Zn1—O4 | 94.0 (2) | C6—O6—Zn2iii | 96.6 (5) |
| O4i—Zn1—O4 | 180.0 | C6—O7—Zn1 | 111.9 (5) |
| O7—Zn1—O3i | 108.9 (2) | C6—O7—Zn2iii | 87.8 (5) |
| O7i—Zn1—O3i | 71.1 (2) | Zn1—O7—Zn2iii | 144.8 (3) |
| O4i—Zn1—O3i | 79.9 (2) | O1—C1—O2 | 121.4 (8) |
| O4—Zn1—O3i | 100.1 (2) | O1—C1—C2 | 120.5 (7) |
| O7—Zn1—O3 | 71.1 (2) | O2—C1—C2 | 118.1 (7) |
| O7i—Zn1—O3 | 108.9 (2) | C1—C2—C3 | 115.6 (7) |
| O4i—Zn1—O3 | 100.1 (2) | C1—C2—H2A | 108.4 |
| O4—Zn1—O3 | 79.9 (2) | C3—C2—H2A | 108.4 |
| O3i—Zn1—O3 | 180.000 (1) | C1—C2—H2B | 108.4 |
| O5ii—Zn2—O1W | 106.3 (3) | C3—C2—H2B | 108.4 |
| O5ii—Zn2—O6iii | 127.5 (3) | H2A—C2—H2B | 107.4 |
| O1W—Zn2—O6iii | 95.1 (2) | O3—C3—C2 | 111.3 (6) |
| O5ii—Zn2—O2 | 86.9 (2) | O3—C3—C4 | 112.7 (6) |
| O1W—Zn2—O2 | 104.5 (2) | C2—C3—C4 | 106.8 (7) |
| O6iii—Zn2—O2 | 133.4 (2) | O3—C3—C6 | 108.5 (6) |
| O5ii—Zn2—O1 | 142.1 (2) | C2—C3—C6 | 109.4 (6) |
| O1W—Zn2—O1 | 87.3 (3) | C4—C3—C6 | 108.1 (6) |
| O6iii—Zn2—O1 | 84.7 (2) | C5—C4—C3 | 116.7 (7) |
| O2—Zn2—O1 | 55.2 (2) | C5—C4—H4A | 108.1 |
| O5ii—Zn2—O7iii | 88.6 (3) | C3—C4—H4A | 108.1 |
| O1W—Zn2—O7iii | 147.6 (2) | C5—C4—H4B | 108.1 |
| O6iii—Zn2—O7iii | 54.1 (2) | C3—C4—H4B | 108.1 |
| O2—Zn2—O7iii | 104.9 (2) | H4A—C4—H4B | 107.3 |
| O1—Zn2—O7iii | 98.5 (2) | O4—C5—O5 | 121.1 (7) |
| Zn2—O1W—H1WA | 117.3 | O4—C5—C4 | 123.8 (7) |
| Zn2—O1W—H1WB | 114.3 | O5—C5—C4 | 115.1 (7) |
| H1WA—O1W—H1WB | 104.0 | O6—C6—O7 | 121.4 (8) |
| C1—O1—Zn2 | 91.4 (5) | O6—C6—C3 | 118.1 (7) |
| C1—O2—Zn2 | 92.0 (5) | O7—C6—C3 | 120.4 (7) |
| C3—O3—Zn1 | 108.1 (4) |
| H··· | ||||
| O3—H3···O2v | 0.82 | 1.88 | 2.691 (8) | 172 |
| O1W—H1WA···O7vi | 0.82 | 2.35 | 3.071 (10) | 148 |
| O1W—H1WB···O6vii | 0.82 | 2.00 | 2.811 (10) | 171 |
Selected bond lengths (Å)
| Zn1—O7 | 2.270 (6) |
| Zn1—O4 | 2.285 (6) |
| Zn1—O3 | 2.319 (6) |
| Zn2—O5i | 2.232 (7) |
| Zn2—O1 | 2.244 (7) |
| Zn2—O6ii | 2.316 (6) |
| Zn2—O2 | 2.338 (6) |
| Zn2—O1 | 2.371 (7) |
| Zn2—O7ii | 2.485 (6) |
Symmetry codes: (i) ; (ii) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O2iii | 0.82 | 1.88 | 2.691 (8) | 172 |
| O1 | 0.82 | 2.35 | 3.071 (10) | 148 |
| O1 | 0.82 | 2.00 | 2.811 (10) | 171 |
Symmetry codes: (iii) ; (iv) ; (v) .