Literature DB >> 21202016

catena-Poly[[diaqua-dipyridine-zinc(II)]-μ-succinato].

Tanwawan Duangthongyou1, Sutatip Siripaisarnpipat.   

Abstract

In the title compound, [Zn(C(4)H(4)O(4))(C(5)H(5)N)(2)(H(2)O)(2)](n), the Zn(II) ion (site symmetry ) is coordinated in an octahedral geometry by two pyridine mol-ecules, two water mol-ecules and two bridging centrosymmetric O-monodentate succinate dianions to create one-dimensional polymeric chains. The chains are cross-linked by O-H⋯O hydrogen bonds, forming sheets.

Entities:  

Year:  2008        PMID: 21202016      PMCID: PMC2961033          DOI: 10.1107/S1600536808006764

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure containing fumarate ions, see: Ohmura et al. (2003 ▶).

Experimental

Crystal data

[Zn(C4H4O4)(C5H5N)2(H2O)2] M = 375.67 Orthorhombic, a = 11.8142 (8) Å b = 8.9111 (7) Å c = 14.9705 (10) Å V = 1576.06 (19) Å3 Z = 4 Mo Kα radiation μ = 1.59 mm−1 T = 273 (2) K 0.08 × 0.08 × 0.04 mm

Data collection

Bruker–Nonius APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.804, T max = 0.931 9256 measured reflections 1814 independent reflections 1200 reflections with I > 2σ(I) R int = 0.067

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.107 S = 1.13 1814 reflections 138 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.55 e Å−3 Δρmin = −0.46 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski and Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: Mercury and local program. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808006764/hb2701sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006764/hb2701Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C4H4O4)(C5H5N)2(H2O)2]F000 = 776
Mr = 375.67Dx = 1.583 Mg m3
Orthorhombic, PbcaMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2052 reflections
a = 11.8142 (8) Åθ = 2.9–27.5º
b = 8.9111 (7) ŵ = 1.59 mm1
c = 14.9705 (10) ÅT = 273 (2) K
V = 1576.06 (19) Å3Block, colourless
Z = 40.08 × 0.08 × 0.04 mm
Bruker–Nonious APEXII CCD camera on κ-goniostat diffractometer1814 independent reflections
Radiation source: fine-focus sealed tube1200 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.067
Detector resolution: 4096x4096pixels / 62x62mm pixels mm-1θmax = 27.6º
T = 273(2) Kθmin = 3.2º
φ and ω scansh = −15→15
Absorption correction: multi-scan(SADABS; Sheldrick, 2007)k = −11→10
Tmin = 0.804, Tmax = 0.931l = −19→17
9256 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difmap and geom
R[F2 > 2σ(F2)] = 0.065H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.108  w = 1/[σ2(Fo2) + 9.8897P] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max < 0.001
1814 reflectionsΔρmax = 0.55 e Å3
138 parametersΔρmin = −0.45 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
xyzUiso*/Ueq
Zn10.50000.00000.50000.0147 (2)
O30.6625 (3)0.0017 (4)0.4416 (2)0.0186 (7)
H3A0.69100.08500.44770.028*
O20.5136 (3)0.2237 (4)0.5340 (2)0.0179 (7)
O10.6873 (3)0.2905 (4)0.4901 (2)0.0229 (8)
C30.3411 (5)0.1656 (6)0.2097 (4)0.0290 (13)
C20.4391 (5)0.2285 (6)0.2438 (4)0.0254 (12)
C50.3356 (4)0.0065 (7)0.3386 (3)0.0206 (10)
C60.5888 (4)0.3201 (5)0.5168 (3)0.0172 (10)
N10.4308 (3)0.0673 (4)0.3719 (3)0.0156 (8)
C10.4810 (4)0.1762 (6)0.3235 (3)0.0199 (11)
C70.5529 (4)0.4835 (6)0.5275 (4)0.0224 (11)
C40.2892 (5)0.0528 (7)0.2586 (4)0.0279 (13)
H40.224 (5)0.010 (6)0.243 (3)0.025 (15)*
H10.549 (4)0.205 (6)0.345 (3)0.018 (13)*
H30.308 (5)0.199 (7)0.154 (4)0.035 (17)*
H50.304 (4)−0.066 (6)0.376 (4)0.026 (15)*
H20.476 (5)0.295 (6)0.209 (4)0.028 (16)*
H7A0.540 (4)0.492 (6)0.591 (4)0.018 (13)*
H70.616 (4)0.549 (5)0.514 (3)0.014 (13)*
H3B0.694 (5)−0.064 (7)0.459 (4)0.04 (2)*
U11U22U33U12U13U23
Zn10.0146 (3)0.0125 (3)0.0169 (4)0.0005 (4)0.0010 (3)0.0002 (4)
O30.0190 (16)0.0113 (16)0.0254 (18)0.0048 (18)0.0012 (13)0.0012 (17)
O20.0192 (16)0.0116 (16)0.0229 (16)−0.0006 (14)0.0033 (14)0.0022 (14)
O10.0160 (15)0.0137 (18)0.039 (2)−0.0010 (17)0.0048 (15)0.0000 (13)
C30.041 (3)0.026 (3)0.020 (3)0.004 (2)−0.012 (2)0.001 (3)
C20.036 (3)0.021 (3)0.019 (3)0.000 (2)0.004 (2)−0.006 (2)
C50.019 (2)0.022 (3)0.021 (2)0.000 (3)0.0002 (18)0.001 (2)
C60.019 (2)0.015 (2)0.018 (3)0.003 (2)−0.0046 (18)0.0011 (19)
N10.0181 (19)0.012 (2)0.017 (2)0.0011 (17)0.0012 (16)0.0016 (17)
C10.020 (3)0.018 (3)0.022 (3)−0.001 (2)−0.002 (2)−0.001 (2)
C70.020 (2)0.014 (3)0.034 (3)−0.001 (2)−0.005 (2)−0.003 (2)
C40.028 (3)0.026 (3)0.029 (3)0.003 (3)−0.007 (2)−0.005 (3)
Zn1—O22.064 (3)C2—C11.374 (7)
Zn1—O2i2.064 (3)C2—H20.90 (6)
Zn1—O3i2.110 (3)C5—N11.345 (6)
Zn1—O32.110 (3)C5—C41.379 (7)
Zn1—N1i2.170 (4)C5—H50.93 (6)
Zn1—N12.170 (4)C6—C71.525 (7)
O3—H3A0.8200N1—C11.348 (6)
O3—H3B0.74 (6)C1—H10.90 (5)
O2—C61.263 (6)C7—C7ii1.526 (9)
O1—C61.258 (5)C7—H7A0.97 (5)
C3—C21.383 (8)C7—H70.97 (5)
C3—C41.387 (8)C4—H40.89 (6)
C3—H30.96 (6)
O2—Zn1—O2i180.0C1—C2—H2123 (4)
O2—Zn1—O3i88.60 (13)C3—C2—H2118 (4)
O2i—Zn1—O3i91.40 (13)N1—C5—C4122.2 (5)
O2—Zn1—O391.40 (13)N1—C5—H5113 (3)
O2i—Zn1—O388.60 (13)C4—C5—H5125 (3)
O3i—Zn1—O3180.0O1—C6—O2124.9 (4)
O2—Zn1—N1i91.12 (14)O1—C6—C7119.4 (4)
O2i—Zn1—N1i88.88 (14)O2—C6—C7115.7 (4)
O3i—Zn1—N1i88.53 (14)C5—N1—C1117.3 (4)
O3—Zn1—N1i91.47 (14)C5—N1—Zn1122.1 (3)
O2—Zn1—N188.88 (14)C1—N1—Zn1120.5 (3)
O2i—Zn1—N191.12 (14)N1—C1—C2123.5 (5)
O3i—Zn1—N191.47 (14)N1—C1—H1114 (3)
O3—Zn1—N188.53 (14)C2—C1—H1122 (3)
N1i—Zn1—N1180C6—C7—C7ii110.8 (5)
Zn1—O3—H3A109.5C6—C7—H7A103 (3)
Zn1—O3—H3B108 (5)C7ii—C7—H7A112 (3)
H3A—O3—H3B118.2C6—C7—H7110 (3)
C6—O2—Zn1131.5 (3)C7ii—C7—H7114 (3)
C2—C3—C4118.0 (5)H7A—C7—H7106 (4)
C2—C3—H3122 (3)C5—C4—C3120.0 (5)
C4—C3—H3120 (3)C5—C4—H4116 (3)
C1—C2—C3118.9 (5)C3—C4—H4124 (4)
O3i—Zn1—O2—C6−174.6 (4)O3—Zn1—N1—C5137.5 (4)
O3—Zn1—O2—C65.4 (4)O2—Zn1—N1—C147.0 (4)
N1i—Zn1—O2—C696.9 (4)O2i—Zn1—N1—C1−133.0 (4)
N1—Zn1—O2—C6−83.1 (4)O3i—Zn1—N1—C1135.6 (4)
C4—C3—C2—C10.5 (8)O3—Zn1—N1—C1−44.4 (4)
Zn1—O2—C6—O1−16.8 (7)C5—N1—C1—C21.0 (7)
Zn1—O2—C6—C7161.3 (3)Zn1—N1—C1—C2−177.2 (4)
C4—C5—N1—C1−0.5 (7)C3—C2—C1—N1−1.0 (8)
C4—C5—N1—Zn1177.6 (4)O1—C6—C7—C7ii123.7 (6)
O2—Zn1—N1—C5−131.1 (4)O2—C6—C7—C7ii−54.5 (7)
O2i—Zn1—N1—C548.9 (4)N1—C5—C4—C30.1 (9)
O3i—Zn1—N1—C5−42.5 (4)C2—C3—C4—C5−0.1 (9)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O10.821.942.690 (5)152
O3—H3B···O1iii0.74 (6)1.97 (6)2.687 (5)164 (5)
Zn1—O22.064 (3)
Zn1—O32.110 (3)
Zn1—N12.170 (4)
O2i—Zn1—N1i88.88 (14)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O10.821.942.690 (5)152
O3—H3B⋯O1ii0.74 (6)1.97 (6)2.687 (5)164 (5)

Symmetry code: (ii) .

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