| Literature DB >> 21201981 |
Jan Moncol, Peter Segľa, Dušan Mikloš, Andreas Fischer, Koman Marian.
Abstract
The asymmetric unit of the title complex, [Cu(C(2)H(8)N(2))(2)(H(2)O)(2)](C(8)H(8)NO(2))(2)·2H(2)O, contains one anion, one half-cation and one water mol-ecule. The Cu(II) atom in the [Cu(en)(2)(H(2)O)(2)](2+) cation (en is ethyl-enediamine) lies on an inversion centre. The four N atoms of the en ligands in the equatorial plane around the Cu(II) atom form a slightly distorted square-planar arrangement, while the slightly distorted Jahn-Teller octa-hedral coordination is completed by two water O atoms in axial positions. In the crystal structure, intra- and inter-molecular N-H⋯O and O-H⋯O hydrogen bonds form a three-dimensional network.Entities:
Year: 2008 PMID: 21201981 PMCID: PMC2960896 DOI: 10.1107/S1600536808005400
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C2H8N2)2(H2O1)2](C8H8NO2)2·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Ag |
| Cell parameters from 2489 reflections | |
| θ = 3.3–21.4º | |
| µ = 0.47 mm−1 | |
| α = 75.271 (1)º | |
| β = 83.809 (1)º | Prism, violet |
| γ = 70.863 (1)º | 0.45 × 0.25 × 0.20 mm |
| Bruker–Nonius KappaCCD diffractometer | 2989 independent reflections |
| Radiation source: fine-focus sealed tube | 2644 reflections with |
| Monochromator: graphite | |
| θmax = 21.4º | |
| ω and φ scans | θmin = 3.3º |
| Absorption correction: numerical(HABITUS; Herrendorf & Bärnighausen, 1997) | |
| 15039 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 2989 reflections | Δρmax = 0.38 e Å−3 |
| 160 parameters | Δρmin = −0.31 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes.Least-squares planes ( |
| Refinement. Refinement of |
| Cu | 0.5000 | 0.5000 | 0.5000 | 0.02500 (12) | |
| N1 | 0.5413 (3) | 0.7274 (2) | 0.48893 (14) | 0.0328 (4) | |
| H1A | 0.6147 | 0.7242 | 0.5459 | 0.039* | |
| H1B | 0.6270 | 0.7540 | 0.4306 | 0.039* | |
| N2 | 0.1813 (3) | 0.6372 (2) | 0.45504 (14) | 0.0307 (4) | |
| H2A | 0.1410 | 0.5969 | 0.4047 | 0.037* | |
| H2B | 0.0813 | 0.6297 | 0.5104 | 0.037* | |
| N3 | −0.0294 (4) | 0.8099 (3) | 1.12361 (17) | 0.0520 (6) | |
| O1 | −0.0720 (3) | 0.6040 (3) | 0.66095 (13) | 0.0493 (5) | |
| O2 | −0.4121 (3) | 0.7310 (2) | 0.71927 (15) | 0.0518 (5) | |
| O1W | 0.3984 (3) | 0.4843 (2) | 0.68797 (15) | 0.0515 (5) | |
| H1W | 0.4422 | 0.5531 | 0.7088 | 0.063* | |
| H2W | 0.2570 | 0.5084 | 0.6916 | 0.063* | |
| O2W | 0.6770 (4) | 0.9227 (3) | 0.29173 (16) | 0.0682 (6) | |
| H3W | 0.7363 | 0.8948 | 0.2368 | 0.063* | |
| H4W | 0.6086 | 1.0274 | 0.2809 | 0.063* | |
| C1 | 0.1767 (4) | 0.8158 (3) | 0.41381 (19) | 0.0399 (5) | |
| H1C | 0.0192 | 0.8928 | 0.4130 | 0.048* | |
| H1D | 0.2402 | 0.8312 | 0.3421 | 0.048* | |
| C2 | 0.3163 (4) | 0.8558 (3) | 0.4831 (2) | 0.0399 (5) | |
| H2C | 0.3294 | 0.9709 | 0.4542 | 0.048* | |
| H2D | 0.2442 | 0.8520 | 0.5530 | 0.048* | |
| C3 | −0.2033 (4) | 0.6638 (3) | 0.72904 (17) | 0.0339 (5) | |
| C4 | −0.1063 (4) | 0.6478 (3) | 0.83208 (19) | 0.0418 (5) | |
| H4A | −0.2050 | 0.6083 | 0.8890 | 0.050* | |
| H4B | 0.0448 | 0.5608 | 0.8387 | 0.050* | |
| C5 | −0.0846 (6) | 0.8114 (3) | 0.8436 (2) | 0.0575 (8) | |
| H5A | −0.2360 | 0.8978 | 0.8392 | 0.069* | |
| H5B | 0.0113 | 0.8527 | 0.7860 | 0.069* | |
| C6 | 0.0179 (4) | 0.7906 (3) | 0.94565 (19) | 0.0389 (5) | |
| C7 | −0.1118 (4) | 0.8301 (3) | 1.0313 (2) | 0.0458 (6) | |
| H7 | −0.2711 | 0.8749 | 1.0242 | 0.055* | |
| C8 | 0.1937 (5) | 0.7467 (3) | 1.1312 (2) | 0.0507 (7) | |
| H8 | 0.2567 | 0.7298 | 1.1962 | 0.061* | |
| C9 | 0.3376 (4) | 0.7045 (3) | 1.0513 (2) | 0.0460 (6) | |
| H9 | 0.4963 | 0.6603 | 1.0606 | 0.055* | |
| C10 | 0.2489 (4) | 0.7271 (3) | 0.95738 (19) | 0.0417 (5) | |
| H10 | 0.3462 | 0.6992 | 0.9005 | 0.050* |
| Cu | 0.02142 (18) | 0.02502 (19) | 0.0296 (2) | −0.00597 (13) | −0.00336 (13) | −0.00873 (14) |
| N1 | 0.0370 (10) | 0.0319 (10) | 0.0332 (10) | −0.0132 (8) | −0.0058 (8) | −0.0086 (8) |
| N2 | 0.0266 (8) | 0.0378 (10) | 0.0292 (9) | −0.0082 (7) | −0.0023 (7) | −0.0121 (8) |
| N3 | 0.0777 (16) | 0.0397 (12) | 0.0397 (13) | −0.0190 (11) | 0.0090 (11) | −0.0145 (10) |
| O1 | 0.0421 (9) | 0.0819 (14) | 0.0342 (9) | −0.0235 (9) | 0.0035 (7) | −0.0280 (9) |
| O2 | 0.0401 (9) | 0.0620 (12) | 0.0555 (12) | −0.0036 (8) | −0.0106 (8) | −0.0300 (9) |
| O1W | 0.0399 (9) | 0.0668 (12) | 0.0526 (11) | −0.0158 (8) | 0.0015 (8) | −0.0243 (9) |
| O2W | 0.0781 (14) | 0.0525 (12) | 0.0540 (13) | −0.0063 (10) | 0.0207 (11) | −0.0053 (10) |
| C1 | 0.0364 (12) | 0.0340 (12) | 0.0404 (13) | 0.0026 (9) | −0.0085 (10) | −0.0078 (10) |
| C2 | 0.0478 (13) | 0.0284 (11) | 0.0425 (14) | −0.0068 (10) | −0.0010 (10) | −0.0129 (10) |
| C3 | 0.0380 (12) | 0.0386 (12) | 0.0311 (12) | −0.0163 (9) | −0.0034 (9) | −0.0119 (9) |
| C4 | 0.0532 (14) | 0.0418 (13) | 0.0336 (13) | −0.0141 (11) | −0.0079 (10) | −0.0126 (10) |
| C5 | 0.089 (2) | 0.0386 (14) | 0.0508 (17) | −0.0225 (14) | −0.0349 (15) | −0.0035 (12) |
| C6 | 0.0540 (14) | 0.0294 (11) | 0.0378 (13) | −0.0159 (10) | −0.0144 (11) | −0.0068 (10) |
| C7 | 0.0436 (13) | 0.0338 (12) | 0.0636 (18) | −0.0142 (10) | −0.0036 (12) | −0.0137 (12) |
| C8 | 0.083 (2) | 0.0384 (14) | 0.0338 (14) | −0.0169 (13) | −0.0209 (13) | −0.0078 (11) |
| C9 | 0.0479 (14) | 0.0426 (14) | 0.0516 (16) | −0.0146 (11) | −0.0149 (12) | −0.0121 (12) |
| C10 | 0.0519 (14) | 0.0419 (13) | 0.0353 (13) | −0.0169 (11) | −0.0005 (10) | −0.0132 (10) |
| Cu—O1Wi | 2.503 (2) | C1—C2 | 1.506 (3) |
| Cu—O1W | 2.503 (2) | C1—H1C | 0.9900 |
| Cu—N1i | 2.015 (2) | C1—H1D | 0.9900 |
| Cu—N1 | 2.015 (2) | C2—H2C | 0.9900 |
| Cu—N2i | 2.022 (2) | C2—H2D | 0.9900 |
| Cu—N2 | 2.022 (2) | C3—C4 | 1.521 (3) |
| O1—C3 | 1.251 (3) | C4—C5 | 1.498 (3) |
| O2—C3 | 1.250 (3) | C4—H4A | 0.9900 |
| O1W—H1W | 0.84 | C4—H4B | 0.9900 |
| O1W—H2W | 0.84 | C5—C6 | 1.513 (3) |
| O2W—H3W | 0.84 | C5—H5A | 0.9900 |
| O2W—H4W | 0.84 | C5—H5B | 0.9900 |
| N1—C2 | 1.472 (3) | C6—C7 | 1.378 (4) |
| N1—H1A | 0.9200 | C6—C10 | 1.379 (3) |
| N1—H1B | 0.9200 | C7—H7 | 0.9500 |
| N2—C1 | 1.480 (3) | C8—C9 | 1.363 (4) |
| N2—H2A | 0.9200 | C8—H8 | 0.9500 |
| N2—H2B | 0.9200 | C9—C10 | 1.370 (3) |
| N3—C8 | 1.327 (4) | C9—H9 | 0.9500 |
| N3—C7 | 1.337 (4) | C10—H10 | 0.9500 |
| O1Wi—Cu—O1W | 180.0 | H1C—C1—H1D | 108.5 |
| N1i—Cu—O1Wi | 88.72 (7) | N1—C2—C1 | 107.48 (18) |
| N1—Cu—O1Wi | 91.28 (7) | N1—C2—H2C | 110.2 |
| N2i—Cu—O1Wi | 93.19 (6) | C1—C2—H2C | 110.2 |
| N2—Cu—O1Wi | 86.81 (6) | N1—C2—H2D | 110.2 |
| N1i—Cu—O1W | 91.28 (7) | C1—C2—H2D | 110.2 |
| N1—Cu—O1W | 88.72 (7) | H2C—C2—H2D | 108.5 |
| N2i—Cu—O1W | 86.81 (6) | O2—C3—O1 | 124.1 (2) |
| N2—Cu—O1W | 93.19 (6) | O2—C3—C4 | 117.4 (2) |
| N1i—Cu—N1 | 180.00 (11) | O1—C3—C4 | 118.4 (2) |
| N1i—Cu—N2i | 84.91 (7) | C5—C4—C3 | 113.0 (2) |
| N1—Cu—N2i | 95.09 (7) | C5—C4—H4A | 109.0 |
| N1i—Cu—N2 | 95.09 (7) | C3—C4—H4A | 109.0 |
| N1—Cu—N2 | 84.91 (7) | C5—C4—H4B | 109.0 |
| N2i—Cu—N2 | 180.0 | C3—C4—H4B | 109.0 |
| C2—N1—Cu | 108.14 (13) | H4A—C4—H4B | 107.8 |
| C2—N1—H1A | 110.1 | C4—C5—C6 | 111.8 (2) |
| Cu—N1—H1A | 110.1 | C4—C5—H5A | 109.2 |
| C2—N1—H1B | 110.1 | C6—C5—H5A | 109.2 |
| Cu—N1—H1B | 110.1 | C4—C5—H5B | 109.2 |
| H1A—N1—H1B | 108.4 | C6—C5—H5B | 109.2 |
| C1—N2—Cu | 107.44 (13) | H5A—C5—H5B | 107.9 |
| C1—N2—H2A | 110.2 | C7—C6—C10 | 116.7 (2) |
| Cu—N2—H2A | 110.2 | C7—C6—C5 | 122.5 (2) |
| C1—N2—H2B | 110.2 | C10—C6—C5 | 120.8 (2) |
| Cu—N2—H2B | 110.2 | N3—C7—C6 | 124.6 (2) |
| H2A—N2—H2B | 108.5 | N3—C7—H7 | 117.7 |
| C8—N3—C7 | 116.3 (2) | C6—C7—H7 | 117.7 |
| Cu—O1W—H1W | 110.3 | N3—C8—C9 | 123.8 (2) |
| Cu—O1W—H2W | 104.9 | N3—C8—H8 | 118.1 |
| H1W—O1W—H2W | 111.9 | C9—C8—H8 | 118.1 |
| H3W—O2W—H4W | 111.2 | C8—C9—C10 | 118.7 (2) |
| N2—C1—C2 | 107.81 (18) | C8—C9—H9 | 120.7 |
| N2—C1—H1C | 110.1 | C10—C9—H9 | 120.7 |
| C2—C1—H1C | 110.1 | C9—C10—C6 | 119.8 (2) |
| N2—C1—H1D | 110.1 | C9—C10—H10 | 120.1 |
| C2—C1—H1D | 110.1 | C6—C10—H10 | 120.1 |
| N2i—Cu—N1—C2 | −165.34 (14) | O1—C3—C4—C5 | 104.8 (3) |
| N2—Cu—N1—C2 | 14.66 (14) | C3—C4—C5—C6 | −178.5 (2) |
| O1Wi—Cu—N1—C2 | 101.34 (14) | C4—C5—C6—C7 | −96.9 (3) |
| O1W—Cu—N1—C2 | −78.66 (14) | C4—C5—C6—C10 | 81.8 (3) |
| N1i—Cu—N2—C1 | −165.31 (14) | C8—N3—C7—C6 | −0.2 (4) |
| N1—Cu—N2—C1 | 14.70 (14) | C10—C6—C7—N3 | −0.5 (4) |
| O1Wi—Cu—N2—C1 | −76.88 (14) | C5—C6—C7—N3 | 178.2 (2) |
| O1W—Cu—N2—C1 | 103.12 (14) | C7—N3—C8—C9 | 0.7 (4) |
| Cu—N2—C1—C2 | −40.8 (2) | N3—C8—C9—C10 | −0.4 (4) |
| Cu—N1—C2—C1 | −40.7 (2) | C8—C9—C10—C6 | −0.4 (4) |
| N2—C1—C2—N1 | 54.5 (2) | C7—C6—C10—C9 | 0.8 (3) |
| O2—C3—C4—C5 | −77.7 (3) | C5—C6—C10—C9 | −178.0 (2) |
| H··· | ||||
| N1—H1A···O2ii | 0.92 | 2.32 | 3.130 (3) | 147 |
| N1—H1A···O1ii | 0.92 | 2.41 | 3.247 (2) | 152 |
| N1—H1B···O2W | 0.92 | 2.11 | 2.944 (3) | 151 |
| N2—H2A···O1iii | 0.92 | 2.29 | 3.150 (3) | 155 |
| N2—H2B···O1 | 0.92 | 2.12 | 3.019 (2) | 164 |
| O1W—H1W···O2ii | 0.84 | 2.06 | 2.873 (3) | 164 |
| O1W—H2W···O1 | 0.84 | 2.00 | 2.814 (2) | 164 |
| O2W—H3W···N3iv | 0.84 | 2.08 | 2.899 (3) | 163 |
| O2W—H4W···O2v | 0.84 | 2.03 | 2.859 (3) | 169 |
| X2 | Cu–N1 | Cu–N2 | Cu–OW | N1–Cu–N2 | |
| (3-pypr)2.2H2O | 2.015 (2) | 2.022 (2) | 2.503 (2) | 0.81 | 84.91 (7) |
| (2,6-(MeO)2nic)2b | 2.018 (2) | 2.020 (2) | 2.467 (2) | 0.82 | 83.96 (8) |
| (4-O2Nbz)2c | 2.015 (2) | 2.027 (2) | 2.537 (2) | 0.80 | 84.92 (7) |
| (2-NH2bz)2d | 2.012 (4) | 2.020 (5) | 2.503 (4) | 0.81 | 84.52 (9) |
| (benz)2e | 2.009 (4) | 2.017 (4) | 2.653 (5) | 0.76 | 84.8 (2) |
| (isonic)2f | 2.021 (2) | 2.018 (2) | 2.598 (2) | 0.78 | 84.98 (6) |
| (4-Fbz)2g | 2.018 (4) | 2.021 (4) | 2.579 (4) | 0.78 | 85.0 (2) |
| (naphs)2h | 2.020 (2) | 2.018 (2) | 2.513 (1) | 0.80 | 84.63 (7) |
| (stz)2.2H2Oi | 2.042 (3) | 2.033 (3) | 2.484 (3) | 0.82 | 84.1 (1) |
| F2.4H2Oj | 2.019 (5) | 2.023 (5) | 2.571 (6) | 0.78 | 84.6 (2) |
| (NH2naphs)2.2H2Ok | 2.023 (2) | 2.012 (2) | 2.437 (2) | 0.83 | 84.30 (9) |
| (Clbtts)2l | 2.019 (4) | 2.049 (3) | 2.416 (3) | 0.84 | 84.2 (2) |
| (Cl-Fbz)2m | 2.009 (2) | 2.016 (2) | 2.618 (1) | 0.77 | 84.30 (6) |
| (BPh4)2.2DMSOn | 2.022 (10) | 2.055 (8) | 2.693 (9) | 0.76 | 84.9 (4) |
| (edcarb).2H2Oo | 1.996 (2) | 2.022 (2) | 2.556 (2) | 0.79 | 84.78 (7) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.92 | 2.32 | 3.130 (3) | 147 |
| N1—H1 | 0.92 | 2.41 | 3.247 (2) | 152 |
| N1—H1 | 0.92 | 2.11 | 2.944 (3) | 151 |
| N2—H2 | 0.92 | 2.29 | 3.150 (3) | 155 |
| N2—H2 | 0.92 | 2.12 | 3.019 (2) | 164 |
| O1 | 0.84 | 2.06 | 2.873 (3) | 164 |
| O1 | 0.84 | 2.00 | 2.814 (2) | 164 |
| O2 | 0.84 | 2.08 | 2.899 (3) | 163 |
| O2 | 0.84 | 2.03 | 2.859 (3) | 169 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .