| Literature DB >> 21201958 |
Bushra Maliha, Ishtiaq Hussain, M Nawaz Tahir, Muhammad Ilyas Tariq, Hamid Latif Siddiqui.
Abstract
The title mol-ecule, C(9)H(8)N(2)O(2), is essentially planar. The crystal structure is stabilized by hydrogen bonding. An intra-molecular N-H⋯O hydrogen bond results in a six-membered ring. Each mol-ecule inter-acts with two others through N-H⋯O and C-H⋯O hydrogen bonding, resulting in the formation of nine-membered rings. These hydrogen bonds generate a two-dimensional polymeric network. There are also π-π inter-actions between the aromatic and heterocyclic rings [centroid-centroid distance 3.638 (2) Å].Entities:
Year: 2008 PMID: 21201958 PMCID: PMC2960760 DOI: 10.1107/S1600536808004923
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H8N2O2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 1295 reflections |
| θ = 1.6–28.6º | |
| µ = 0.11 mm−1 | |
| Needle, colourless | |
| 0.25 × 0.12 × 0.10 mm |
| Bruker KappaAPEXII CCD diffractometer | 1254 independent reflections |
| Radiation source: fine-focus sealed tube | 860 reflections with |
| Monochromator: graphite | |
| Detector resolution: 7.40 pixels mm-1 | θmax = 28.6º |
| θmin = 1.6º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | |
| 5461 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 1254 reflections | Δρmax = 0.23 e Å−3 |
| 124 parameters | Δρmin = −0.22 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.1443 (8) | 0.5881 (3) | 0.09333 (8) | 0.0599 (8) | |
| O2 | 0.3962 (6) | 0.7070 (2) | 0.24721 (7) | 0.0479 (7) | |
| N1 | 0.1909 (7) | 0.7618 (2) | 0.16626 (8) | 0.0335 (6) | |
| N2 | 0.3940 (9) | 0.4951 (3) | 0.18736 (10) | 0.0512 (8) | |
| H2A | 0.346 (10) | 0.476 (4) | 0.1514 (13) | 0.061* | |
| H2B | 0.478 (10) | 0.421 (4) | 0.2092 (14) | 0.061* | |
| C1 | 0.1002 (9) | 0.7240 (3) | 0.11498 (10) | 0.0380 (7) | |
| C2 | −0.0491 (8) | 0.8806 (3) | 0.09388 (10) | 0.0351 (7) | |
| C3 | −0.1770 (10) | 0.9115 (4) | 0.04430 (11) | 0.0450 (8) | |
| H3 | −0.1780 | 0.8269 | 0.0190 | 0.054* | |
| C4 | −0.3025 (9) | 1.0715 (4) | 0.03378 (12) | 0.0491 (8) | |
| H4 | −0.3903 | 1.0952 | 0.0010 | 0.059* | |
| C5 | −0.2985 (9) | 1.1968 (4) | 0.07165 (12) | 0.0489 (9) | |
| H5 | −0.3837 | 1.3038 | 0.0639 | 0.059* | |
| C6 | −0.1693 (9) | 1.1655 (4) | 0.12114 (11) | 0.0427 (7) | |
| H6 | −0.1652 | 1.2504 | 0.1463 | 0.051* | |
| C7 | −0.0474 (8) | 1.0053 (3) | 0.13185 (10) | 0.0343 (7) | |
| C8 | 0.1037 (9) | 0.9367 (3) | 0.18109 (9) | 0.0335 (7) | |
| H8A | 0.3014 | 1.0006 | 0.1912 | 0.040* | |
| H8B | −0.0569 | 0.9384 | 0.2095 | 0.040* | |
| C9 | 0.3350 (8) | 0.6532 (3) | 0.20346 (10) | 0.0350 (7) |
| O1 | 0.102 (2) | 0.0398 (11) | 0.0383 (10) | 0.0154 (14) | −0.0116 (14) | −0.0118 (9) |
| O2 | 0.0734 (18) | 0.0362 (11) | 0.0340 (10) | 0.0018 (12) | −0.0113 (11) | 0.0002 (8) |
| N1 | 0.0453 (16) | 0.0263 (10) | 0.0289 (10) | 0.0045 (11) | −0.0024 (10) | −0.0006 (8) |
| N2 | 0.081 (2) | 0.0327 (13) | 0.0404 (13) | 0.0173 (15) | −0.0087 (15) | 0.0015 (10) |
| C1 | 0.050 (2) | 0.0358 (14) | 0.0286 (12) | −0.0004 (15) | −0.0013 (13) | −0.0047 (11) |
| C2 | 0.0382 (18) | 0.0348 (14) | 0.0323 (12) | 0.0001 (13) | 0.0018 (13) | 0.0021 (11) |
| C3 | 0.050 (2) | 0.0502 (17) | 0.0345 (13) | 0.0036 (18) | −0.0019 (14) | 0.0011 (13) |
| C4 | 0.047 (2) | 0.064 (2) | 0.0366 (13) | 0.0042 (19) | −0.0034 (14) | 0.0140 (14) |
| C5 | 0.047 (2) | 0.0477 (18) | 0.0518 (17) | 0.0100 (17) | 0.0017 (16) | 0.0159 (15) |
| C6 | 0.0473 (19) | 0.0352 (14) | 0.0455 (15) | 0.0051 (16) | 0.0040 (15) | 0.0022 (12) |
| C7 | 0.0365 (18) | 0.0344 (14) | 0.0321 (12) | 0.0019 (13) | 0.0018 (12) | 0.0016 (11) |
| C8 | 0.0437 (19) | 0.0274 (12) | 0.0293 (11) | 0.0002 (14) | 0.0001 (12) | −0.0027 (10) |
| C9 | 0.0408 (18) | 0.0314 (13) | 0.0326 (12) | −0.0014 (15) | 0.0028 (13) | 0.0020 (11) |
| O1—C1 | 1.218 (3) | C3—C4 | 1.382 (4) |
| O2—C9 | 1.224 (3) | C3—H3 | 0.9300 |
| N1—C1 | 1.396 (3) | C4—C5 | 1.385 (5) |
| N1—C9 | 1.404 (3) | C4—H4 | 0.9300 |
| N1—C8 | 1.470 (3) | C5—C6 | 1.392 (4) |
| N2—C9 | 1.332 (3) | C5—H5 | 0.9300 |
| N2—H2A | 0.95 (3) | C6—C7 | 1.379 (4) |
| N2—H2B | 0.87 (3) | C6—H6 | 0.9300 |
| C1—C2 | 1.472 (4) | C7—C8 | 1.500 (4) |
| C2—C7 | 1.383 (4) | C8—H8A | 0.9700 |
| C2—C3 | 1.392 (4) | C8—H8B | 0.9700 |
| C1—N1—C9 | 128.0 (2) | C4—C5—C6 | 121.2 (3) |
| C1—N1—C8 | 112.5 (2) | C4—C5—H5 | 119.4 |
| C9—N1—C8 | 119.4 (2) | C6—C5—H5 | 119.4 |
| C9—N2—H2A | 114 (2) | C7—C6—C5 | 118.3 (3) |
| C9—N2—H2B | 120 (2) | C7—C6—H6 | 120.8 |
| H2A—N2—H2B | 126 (3) | C5—C6—H6 | 120.8 |
| O1—C1—N1 | 125.4 (3) | C6—C7—C2 | 120.5 (2) |
| O1—C1—C2 | 128.8 (2) | C6—C7—C8 | 129.7 (2) |
| N1—C1—C2 | 105.8 (2) | C2—C7—C8 | 109.8 (2) |
| C7—C2—C3 | 121.4 (3) | N1—C8—C7 | 102.36 (19) |
| C7—C2—C1 | 109.5 (2) | N1—C8—H8A | 111.3 |
| C3—C2—C1 | 129.1 (2) | C7—C8—H8A | 111.3 |
| C4—C3—C2 | 118.1 (3) | N1—C8—H8B | 111.3 |
| C4—C3—H3 | 121.0 | C7—C8—H8B | 111.3 |
| C2—C3—H3 | 121.0 | H8A—C8—H8B | 109.2 |
| C3—C4—C5 | 120.6 (3) | O2—C9—N2 | 124.9 (3) |
| C3—C4—H4 | 119.7 | O2—C9—N1 | 119.6 (2) |
| C5—C4—H4 | 119.7 | N2—C9—N1 | 115.5 (2) |
| C9—N1—C1—O1 | −2.8 (5) | C5—C6—C7—C8 | −179.9 (3) |
| C8—N1—C1—O1 | −179.9 (3) | C3—C2—C7—C6 | −0.9 (5) |
| C9—N1—C1—C2 | 178.1 (3) | C1—C2—C7—C6 | 178.8 (3) |
| C8—N1—C1—C2 | 1.0 (3) | C3—C2—C7—C8 | 179.9 (3) |
| O1—C1—C2—C7 | −179.5 (3) | C1—C2—C7—C8 | −0.4 (4) |
| N1—C1—C2—C7 | −0.4 (4) | C1—N1—C8—C7 | −1.2 (3) |
| O1—C1—C2—C3 | 0.2 (6) | C9—N1—C8—C7 | −178.5 (2) |
| N1—C1—C2—C3 | 179.3 (3) | C6—C7—C8—N1 | −178.1 (3) |
| C7—C2—C3—C4 | 0.2 (5) | C2—C7—C8—N1 | 0.9 (3) |
| C1—C2—C3—C4 | −179.5 (3) | C1—N1—C9—O2 | −179.3 (3) |
| C2—C3—C4—C5 | 0.3 (5) | C8—N1—C9—O2 | −2.4 (4) |
| C3—C4—C5—C6 | −0.1 (5) | C1—N1—C9—N2 | 0.6 (5) |
| C4—C5—C6—C7 | −0.6 (5) | C8—N1—C9—N2 | 177.5 (3) |
| C5—C6—C7—C2 | 1.1 (5) |
| H··· | ||||
| N2—H2A···O1 | 0.95 (3) | 1.91 (3) | 2.710 (3) | 140 (2) |
| N2—H2B···O2i | 0.88 (3) | 2.08 (3) | 2.943 (3) | 167 (3) |
| C8—H8A···O2ii | 0.97 | 2.57 | 3.447 (4) | 151 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.95 (3) | 1.91 (3) | 2.710 (3) | 140 (2) |
| N2—H2 | 0.88 (3) | 2.08 (3) | 2.943 (3) | 167 (3) |
| C8—H8 | 0.97 | 2.57 | 3.447 (4) | 151 |
Symmetry codes: (i) ; (ii) .