| Literature DB >> 21201943 |
Maxime A Siegler1, Huub Kooijman, Anthony L Spek.
Abstract
The chiral title compound, C(7)H(12)O(2), a lactone derivative, features a seven-membered ring that adopts a chair conformation. The crystal structure is stabilized by weak C-H⋯O inter-actions occurring in the (100) plane. The absolute configuration was assigned on the basis of the enantioselective synthesis.Entities:
Year: 2008 PMID: 21201943 PMCID: PMC2960826 DOI: 10.1107/S1600536808004583
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H12O2 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 7835 reflections |
| θ = 1.0–27.5º | |
| µ = 0.08 mm−1 | |
| β = 110.949 (13)º | Prism, colourless |
| 0.35 × 0.15 × 0.10 mm | |
| Nonius KappaCCD diffractometer | 862 reflections with |
| Radiation source: rotating anode | |
| Monochromator: graphite | θmax = 27.5º |
| θmin = 3.5º | |
| φ and ω scans | |
| Absorption correction: none | |
| 10010 measured reflections | |
| 889 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 889 reflections | Δρmax = 0.12 e Å−3 |
| 83 parameters | Δρmin = −0.16 e Å−3 |
| 1 restraint | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods | Absolute structure: known chirality of atom C6(S) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.03545 (16) | 0.06828 (15) | −0.16671 (13) | 0.0355 (3) | |
| O2 | 1.11573 (13) | 0.04935 (14) | 0.13758 (12) | 0.0288 (2) | |
| C1 | 0.9754 (2) | 0.03155 (18) | −0.03896 (16) | 0.0258 (3) | |
| C2 | 0.7534 (2) | −0.0285 (2) | −0.07029 (18) | 0.0301 (3) | |
| H2A | 0.7594 | −0.1422 | −0.0042 | 0.036* | |
| H2B | 0.6778 | −0.0491 | −0.2069 | 0.036* | |
| C3 | 0.6274 (2) | 0.1054 (2) | 0.0003 (2) | 0.0356 (3) | |
| H3A | 0.6603 | 0.2261 | −0.0311 | 0.043* | |
| H3B | 0.4740 | 0.0849 | −0.0669 | 0.043* | |
| C4 | 0.6759 (2) | 0.0938 (2) | 0.2120 (2) | 0.0365 (3) | |
| H4A | 0.6389 | −0.0260 | 0.2421 | 0.044* | |
| H4B | 0.5841 | 0.1787 | 0.2461 | 0.044* | |
| C5 | 0.9066 (2) | 0.1315 (2) | 0.33415 (18) | 0.0303 (3) | |
| H5A | 0.9423 | 0.2528 | 0.3071 | 0.036* | |
| H5B | 0.9205 | 0.1274 | 0.4685 | 0.036* | |
| C6 | 1.06592 (19) | 0.00512 (19) | 0.30521 (16) | 0.0267 (3) | |
| H6 | 1.0098 | −0.1181 | 0.2938 | 0.032* | |
| C7 | 1.2785 (2) | 0.0148 (3) | 0.46522 (19) | 0.0403 (4) | |
| H7A | 1.3333 | 0.1356 | 0.4759 | 0.060* | |
| H7B | 1.3783 | −0.0660 | 0.4396 | 0.060* | |
| H7C | 1.2615 | −0.0190 | 0.5837 | 0.060* |
| O1 | 0.0442 (5) | 0.0406 (6) | 0.0260 (5) | 0.0001 (5) | 0.0177 (4) | 0.0018 (4) |
| O2 | 0.0248 (4) | 0.0400 (6) | 0.0219 (4) | −0.0028 (4) | 0.0087 (3) | 0.0022 (4) |
| C1 | 0.0305 (6) | 0.0245 (6) | 0.0221 (6) | 0.0029 (5) | 0.0093 (5) | −0.0007 (5) |
| C2 | 0.0272 (6) | 0.0341 (7) | 0.0255 (6) | −0.0021 (5) | 0.0050 (5) | −0.0041 (6) |
| C3 | 0.0242 (6) | 0.0431 (9) | 0.0365 (7) | 0.0058 (6) | 0.0074 (5) | 0.0002 (7) |
| C4 | 0.0298 (6) | 0.0451 (9) | 0.0382 (7) | 0.0031 (6) | 0.0166 (5) | −0.0030 (7) |
| C5 | 0.0360 (7) | 0.0322 (7) | 0.0254 (6) | −0.0015 (6) | 0.0143 (5) | −0.0026 (5) |
| C6 | 0.0265 (6) | 0.0330 (7) | 0.0202 (6) | −0.0027 (5) | 0.0079 (5) | 0.0028 (5) |
| C7 | 0.0311 (6) | 0.0598 (11) | 0.0252 (6) | −0.0040 (7) | 0.0043 (5) | 0.0070 (7) |
| O1—C1 | 1.2095 (16) | C4—H4A | 0.9900 |
| O2—C1 | 1.3428 (15) | C4—H4B | 0.9900 |
| O2—C6 | 1.4659 (14) | C5—C6 | 1.5140 (19) |
| C1—C2 | 1.5028 (18) | C5—H5A | 0.9900 |
| C2—C3 | 1.539 (2) | C5—H5B | 0.9900 |
| C2—H2A | 0.9900 | C6—C7 | 1.5152 (18) |
| C2—H2B | 0.9900 | C6—H6 | 1.0000 |
| C3—C4 | 1.523 (2) | C7—H7A | 0.9800 |
| C3—H3A | 0.9900 | C7—H7B | 0.9800 |
| C3—H3B | 0.9900 | C7—H7C | 0.9800 |
| C4—C5 | 1.5288 (19) | ||
| C1—O2—C6 | 122.88 (10) | C5—C4—H4B | 108.6 |
| O1—C1—O2 | 117.15 (12) | H4A—C4—H4B | 107.6 |
| O1—C1—C2 | 123.02 (11) | C6—C5—C4 | 114.69 (12) |
| O2—C1—C2 | 119.82 (11) | C6—C5—H5A | 108.6 |
| C1—C2—C3 | 112.99 (12) | C4—C5—H5A | 108.6 |
| C1—C2—H2A | 109.0 | C6—C5—H5B | 108.6 |
| C3—C2—H2A | 109.0 | C4—C5—H5B | 108.6 |
| C1—C2—H2B | 109.0 | H5A—C5—H5B | 107.6 |
| C3—C2—H2B | 109.0 | O2—C6—C5 | 112.13 (11) |
| H2A—C2—H2B | 107.8 | O2—C6—C7 | 103.76 (10) |
| C4—C3—C2 | 113.05 (12) | C5—C6—C7 | 111.89 (12) |
| C4—C3—H3A | 109.0 | O2—C6—H6 | 109.6 |
| C2—C3—H3A | 109.0 | C5—C6—H6 | 109.6 |
| C4—C3—H3B | 109.0 | C7—C6—H6 | 109.6 |
| C2—C3—H3B | 109.0 | C6—C7—H7A | 109.5 |
| H3A—C3—H3B | 107.8 | C6—C7—H7B | 109.5 |
| C3—C4—C5 | 114.64 (11) | H7A—C7—H7B | 109.5 |
| C3—C4—H4A | 108.6 | C6—C7—H7C | 109.5 |
| C5—C4—H4A | 108.6 | H7A—C7—H7C | 109.5 |
| C3—C4—H4B | 108.6 | H7B—C7—H7C | 109.5 |
| C6—O2—C1—O1 | −178.35 (12) | C3—C4—C5—C6 | −61.49 (19) |
| C6—O2—C1—C2 | 2.78 (18) | C1—O2—C6—C5 | −68.78 (16) |
| O1—C1—C2—C3 | −112.90 (16) | C1—O2—C6—C7 | 170.29 (13) |
| O2—C1—C2—C3 | 65.90 (16) | C4—C5—C6—O2 | 80.45 (14) |
| C1—C2—C3—C4 | −81.25 (16) | C4—C5—C6—C7 | −163.43 (12) |
| C2—C3—C4—C5 | 61.39 (19) |
| C—H···O | C—H | H···O | C···O | C—H···A |
| C2—H2A···O1i | 0.99 | 2.67 | 3.573 (2) | 152 |
| C5—H5A···O1ii | 0.99 | 2.64 | 3.616 (2) | 166 |
| C5—H5B···O1ii | 0.99 | 2.63 | 3.601 (2) | 168 |
| C6—H6···O1i | 1.00 | 2.54 | 3.466 (2) | 154 |
Short-contact C—H⋯O interactions (Å, °) found in the (100) plane
| C—H⋯O | C—H | H⋯O | C⋯O | C—H⋯A |
|---|---|---|---|---|
| C2—H2 | 0.99 | 2.67 | 3.573 (2) | 152 |
| C5—H5 | 0.99 | 2.64 | 3.616 (2) | 166 |
| C5—H5 | 0.99 | 2.63 | 3.601 (2) | 168 |
| C6—H6⋯O1i | 1.00 | 2.54 | 3.466 (2) | 154 |
Symmetry codes: (i) ; (ii) .