Literature DB >> 21201893

tert-Butyl N-[(S)-3-isopropyl-2-oxo-oxetan-3-yl]carbamate.

Lesław Sieroń, Adam Kudaj, Aleksandra Olma, Janina Karolak-Wojciechowska.   

Abstract

The structure of the title compound, C(11)H(19)NO(4), contains two crystallographically independent mol-ecules in the asymmetric unit. Both adopt the same conformation and they form pseudosymmetric R(2) (2)(8) dimers via two N-H⋯O hydrogen bonds. The dimers are linked by weak C-H⋯O inter-actions and are stacked in columns along the a axis.

Entities:  

Year:  2008        PMID: 21201893      PMCID: PMC2960849          DOI: 10.1107/S1600536808003279

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Etter et al. (1990 ▶); Lall et al. (2002 ▶); Lowe & Vederas (1995 ▶); Olma & Kudaj (2005 ▶); Sieroń et al. (2008 ▶); Smith & Goodman (2003 ▶).

Experimental

Crystal data

C11H19NO4 M = 229.27 Monoclinic, a = 6.0475 (2) Å b = 20.8957 (6) Å c = 10.2928 (3) Å β = 94.675 (3)° V = 1296.34 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.4 × 0.3 × 0.3 mm

Data collection

Kuma KM-4-CCD diffractometer Absorption correction: none 19342 measured reflections 2615 independent reflections 2118 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.103 S = 1.02 2615 reflections 299 parameters 1 restraint H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.15 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003279/gd2021sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003279/gd2021Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H19NO4F000 = 496
Mr = 229.27Dx = 1.175 Mg m3
Monoclinic, P21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 11196 reflections
a = 6.0475 (2) Åθ = 1.9–28.0º
b = 20.8957 (6) ŵ = 0.09 mm1
c = 10.2928 (3) ÅT = 298 K
β = 94.675 (3)ºRectangular plate, colourless
V = 1296.34 (7) Å30.4 × 0.3 × 0.3 mm
Z = 4
Kuma KM-4-CCD diffractometer2118 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.026
Detector resolution: 8.2356 pixels mm-1θmax = 26.0º
T = 298 Kθmin = 2.2º
ω scansh = −7→7
Absorption correction: nonek = −23→25
19342 measured reflectionsl = −12→12
2615 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.103  w = 1/[σ2(Fo2) + (0.0757P)2] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
2615 reflectionsΔρmax = 0.14 e Å3
299 parametersΔρmin = −0.15 e Å3
1 restraintExtinction correction: SHELXTL (Bruker, 2000), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.023 (5)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6494 (4)0.23045 (10)0.63037 (19)0.0829 (8)
O20.8994 (4)0.25263 (14)0.4835 (3)0.1062 (10)
O90.2398 (3)0.27971 (8)0.20705 (16)0.0622 (6)
O100.4114 (3)0.21360 (7)0.35786 (15)0.0564 (5)
N80.4182 (3)0.31805 (8)0.39179 (17)0.0497 (6)
C20.7305 (5)0.26212 (14)0.5292 (3)0.0688 (10)
C30.5404 (4)0.31069 (10)0.5160 (2)0.0468 (6)
C40.4449 (5)0.26711 (14)0.6194 (2)0.0664 (9)
C50.6185 (5)0.37608 (11)0.5715 (2)0.0595 (8)
C60.4225 (6)0.41648 (14)0.6078 (3)0.0806 (13)
C70.7639 (6)0.41090 (18)0.4834 (3)0.0893 (11)
C90.3479 (4)0.27053 (10)0.3106 (2)0.0489 (7)
C110.3517 (4)0.15329 (10)0.2879 (2)0.0535 (7)
C120.4526 (5)0.15184 (14)0.1587 (3)0.0698 (10)
C130.4626 (7)0.10416 (14)0.3800 (4)0.0905 (13)
C140.1059 (5)0.14520 (14)0.2731 (3)0.0751 (10)
O21−0.3083 (4)0.48529 (11)−0.0728 (2)0.1029 (10)
O220.0293 (6)0.47727 (12)−0.1507 (2)0.1157 (12)
O290.2623 (3)0.44185 (7)0.28415 (17)0.0670 (6)
O300.0350 (3)0.50520 (7)0.15453 (15)0.0591 (5)
N280.0285 (3)0.40040 (9)0.12378 (16)0.0503 (6)
C22−0.1048 (6)0.45988 (14)−0.0824 (3)0.0744 (10)
C23−0.1359 (4)0.40626 (11)0.01507 (19)0.0490 (7)
C24−0.3549 (5)0.44115 (16)0.0314 (3)0.0809 (11)
C25−0.1695 (4)0.34178 (12)−0.0555 (2)0.0544 (7)
C260.0390 (6)0.31841 (15)−0.1124 (3)0.0732 (10)
C27−0.2654 (5)0.29098 (14)0.0287 (3)0.0730 (10)
C290.1192 (4)0.44917 (10)0.1946 (2)0.0497 (7)
C310.1104 (4)0.56660 (10)0.2160 (2)0.0541 (7)
C320.0453 (6)0.56815 (15)0.3535 (3)0.0784 (10)
C33−0.0211 (6)0.61481 (14)0.1317 (3)0.0854 (11)
C340.3547 (5)0.57527 (15)0.2071 (3)0.0800 (10)
H4A0.415700.289400.698900.0800*
H4B0.316500.242600.586100.0800*
H50.709700.367500.652700.0710*
H6A0.476200.453000.657400.1210*
H6B0.329200.391300.658900.1210*
H6C0.338600.430600.529800.1210*
H7A0.677000.424100.405800.1340*
H7B0.880800.383000.460500.1340*
H7C0.827000.447900.527600.1340*
H80.386800.356500.366800.0600*
H12A0.380100.182900.101100.1050*
H12B0.434100.110000.120900.1050*
H12C0.607800.161700.171800.1050*
H13A0.619000.112600.391400.1360*
H13B0.438400.062100.344000.1360*
H13C0.400500.106600.462700.1360*
H14A0.046600.152000.355800.1130*
H14B0.070300.102700.242900.1130*
H14C0.042500.175700.211100.1130*
H24A−0.485300.414800.010900.0970*
H24B−0.360600.461600.115600.0970*
H25−0.279500.34910−0.129300.0650*
H26A0.148500.30770−0.043000.1100*
H26B0.095500.35150−0.165300.1100*
H26C0.005100.28120−0.165000.1100*
H27A−0.297100.25310−0.022300.1100*
H27B−0.399800.306600.061000.1100*
H27C−0.160200.281000.100700.1100*
H280.072400.362400.145200.0600*
H32A−0.111100.560400.353700.1180*
H32B0.080100.609300.391000.1180*
H32C0.125300.535600.403700.1180*
H33A0.015000.610400.043100.1280*
H33B0.015500.657300.162000.1280*
H33C−0.176900.607400.136500.1280*
H34A0.434400.544300.261700.1200*
H34B0.397200.617600.235500.1200*
H34C0.389100.569400.118500.1200*
U11U22U33U12U13U23
O10.1125 (17)0.0604 (12)0.0703 (11)0.0111 (11)−0.0261 (11)0.0139 (9)
O20.0701 (14)0.121 (2)0.1255 (19)0.0289 (13)−0.0045 (13)−0.0300 (16)
O90.0816 (12)0.0452 (9)0.0549 (9)0.0060 (8)−0.0242 (8)−0.0014 (7)
O100.0752 (11)0.0329 (8)0.0572 (9)0.0017 (7)−0.0190 (7)−0.0017 (6)
N80.0650 (11)0.0329 (9)0.0479 (9)0.0014 (8)−0.0148 (8)0.0006 (7)
C20.0660 (18)0.0677 (17)0.0690 (16)0.0119 (13)−0.0178 (13)−0.0129 (13)
C30.0549 (12)0.0401 (11)0.0437 (10)0.0011 (9)−0.0062 (9)−0.0013 (8)
C40.0836 (18)0.0597 (16)0.0548 (13)−0.0038 (14)−0.0004 (12)0.0062 (11)
C50.0801 (17)0.0483 (13)0.0465 (12)−0.0082 (12)−0.0174 (11)−0.0019 (10)
C60.120 (3)0.0534 (16)0.0676 (16)0.0097 (16)0.0025 (16)−0.0139 (12)
C70.092 (2)0.084 (2)0.0889 (19)−0.0388 (19)−0.0102 (17)0.0089 (17)
C90.0569 (12)0.0393 (11)0.0480 (11)0.0018 (10)−0.0107 (9)0.0003 (9)
C110.0625 (14)0.0343 (11)0.0623 (13)−0.0004 (10)−0.0025 (11)−0.0064 (9)
C120.0778 (17)0.0534 (15)0.0787 (18)−0.0049 (13)0.0103 (13)−0.0123 (12)
C130.126 (3)0.0419 (15)0.099 (2)0.0051 (16)−0.0194 (19)0.0095 (13)
C140.0700 (17)0.0581 (17)0.097 (2)−0.0114 (13)0.0063 (14)−0.0184 (14)
O210.124 (2)0.0657 (13)0.1089 (16)0.0282 (13)−0.0526 (14)0.0013 (12)
O220.191 (3)0.0772 (16)0.0807 (14)−0.0227 (18)0.0218 (16)0.0257 (13)
O290.0875 (12)0.0407 (9)0.0661 (10)0.0031 (8)−0.0337 (9)−0.0037 (7)
O300.0761 (11)0.0358 (8)0.0608 (9)0.0037 (7)−0.0226 (8)−0.0020 (7)
N280.0638 (11)0.0355 (9)0.0490 (9)0.0023 (8)−0.0119 (8)−0.0014 (8)
C220.110 (2)0.0510 (15)0.0580 (15)−0.0025 (16)−0.0194 (15)0.0069 (11)
C230.0553 (12)0.0462 (12)0.0433 (10)0.0034 (10)−0.0088 (9)−0.0020 (9)
C240.0643 (16)0.079 (2)0.096 (2)0.0137 (14)−0.0133 (14)−0.0235 (16)
C250.0652 (14)0.0490 (12)0.0464 (11)−0.0050 (11)−0.0111 (10)−0.0019 (10)
C260.093 (2)0.0652 (16)0.0618 (15)0.0043 (14)0.0082 (14)−0.0139 (12)
C270.0766 (18)0.0601 (16)0.0800 (17)−0.0185 (13)−0.0084 (14)0.0069 (13)
C290.0621 (13)0.0382 (11)0.0470 (11)0.0006 (10)−0.0069 (10)−0.0006 (9)
C310.0646 (14)0.0326 (11)0.0634 (13)0.0001 (10)−0.0048 (11)−0.0014 (9)
C320.097 (2)0.0627 (17)0.0760 (17)−0.0035 (16)0.0099 (15)−0.0136 (14)
C330.108 (2)0.0432 (14)0.101 (2)0.0107 (15)−0.0159 (18)0.0070 (14)
C340.0734 (19)0.0540 (15)0.114 (2)−0.0037 (14)0.0167 (16)−0.0104 (15)
O1—C21.359 (4)C12—H12C0.96
O1—C41.451 (4)C12—H12B0.96
O2—C21.176 (4)C12—H12A0.96
O9—C91.219 (3)C13—H13C0.96
O10—C91.330 (3)C13—H13A0.96
O10—C111.481 (3)C13—H13B0.96
O21—C241.459 (4)C14—H14B0.96
O21—C221.351 (4)C14—H14A0.96
O22—C221.173 (5)C14—H14C0.96
O29—C291.221 (3)C22—C231.526 (4)
O30—C311.486 (3)C23—C251.536 (3)
O30—C291.329 (3)C23—C241.533 (4)
N8—C31.432 (3)C25—C261.514 (4)
N8—C91.344 (3)C25—C271.515 (4)
N8—H80.86C31—C331.513 (4)
N28—C231.440 (3)C31—C341.499 (4)
N28—C291.344 (3)C31—C321.500 (4)
N28—H280.86C24—H24A0.97
C2—C31.531 (4)C24—H24B0.97
C3—C51.540 (3)C25—H250.98
C3—C41.548 (3)C26—H26A0.96
C5—C71.502 (4)C26—H26B0.96
C5—C61.526 (4)C26—H26C0.96
C11—C141.492 (4)C27—H27A0.96
C11—C121.508 (4)C27—H27B0.96
C11—C131.516 (4)C27—H27C0.96
C4—H4A0.97C32—H32A0.96
C4—H4B0.97C32—H32B0.96
C5—H50.98C32—H32C0.96
C6—H6B0.96C33—H33A0.96
C6—H6C0.96C33—H33B0.96
C6—H6A0.96C33—H33C0.96
C7—H7B0.96C34—H34A0.96
C7—H7C0.96C34—H34B0.96
C7—H7A0.96C34—H34C0.96
C2—O1—C492.4 (2)H14A—C14—H14B109
C9—O10—C11122.10 (17)H14A—C14—H14C109
C22—O21—C2492.1 (2)H14B—C14—H14C109
C29—O30—C31122.15 (17)C11—C14—H14A109
C3—N8—C9126.14 (17)C11—C14—H14B109
C9—N8—H8117O22—C22—C23138.6 (3)
C3—N8—H8117O21—C22—O22126.9 (3)
C23—N28—C29125.62 (19)O21—C22—C2394.5 (2)
C29—N28—H28117N28—C23—C22117.3 (2)
C23—N28—H28117C22—C23—C2482.9 (2)
O1—C2—C394.3 (2)N28—C23—C24120.21 (19)
O1—C2—O2127.2 (3)N28—C23—C25110.43 (18)
O2—C2—C3138.3 (3)C24—C23—C25112.8 (2)
C2—C3—C482.45 (19)C22—C23—C25110.60 (18)
N8—C3—C5110.87 (17)O21—C24—C2390.0 (2)
C2—C3—C5110.5 (2)C23—C25—C27112.71 (19)
N8—C3—C4118.9 (2)C23—C25—C26112.6 (2)
N8—C3—C2118.66 (19)C26—C25—C27111.4 (2)
C4—C3—C5112.78 (18)O29—C29—N28123.2 (2)
O1—C4—C390.0 (2)O29—C29—O30125.1 (2)
C3—C5—C6111.1 (2)O30—C29—N28111.76 (19)
C6—C5—C7112.6 (2)O30—C31—C33101.66 (19)
C3—C5—C7112.5 (2)O30—C31—C34110.4 (2)
O9—C9—O10125.4 (2)C32—C31—C34113.0 (2)
O9—C9—N8123.2 (2)C33—C31—C34111.1 (2)
O10—C9—N8111.47 (18)C32—C31—C33111.2 (2)
C12—C11—C14112.3 (2)O30—C31—C32108.99 (19)
C13—C11—C14111.9 (2)O21—C24—H24A114
C12—C11—C13110.3 (2)O21—C24—H24B114
O10—C11—C14110.3 (2)C23—C24—H24A114
O10—C11—C12110.22 (19)C23—C24—H24B114
O10—C11—C13101.20 (19)H24A—C24—H24B111
C3—C4—H4B114C23—C25—H25107
C3—C4—H4A114C26—C25—H25107
H4A—C4—H4B111C27—C25—H25107
O1—C4—H4B114C25—C26—H26A109
O1—C4—H4A114C25—C26—H26B109
C6—C5—H5107C25—C26—H26C109
C3—C5—H5107H26A—C26—H26B110
C7—C5—H5107H26A—C26—H26C109
H6A—C6—H6C109H26B—C26—H26C109
C5—C6—H6C109C25—C27—H27A109
H6A—C6—H6B109C25—C27—H27B110
H6B—C6—H6C109C25—C27—H27C109
C5—C6—H6A110H27A—C27—H27B109
C5—C6—H6B110H27A—C27—H27C109
C5—C7—H7A110H27B—C27—H27C109
C5—C7—H7C109C31—C32—H32A109
C5—C7—H7B109C31—C32—H32B109
H7B—C7—H7C109C31—C32—H32C109
H7A—C7—H7C109H32A—C32—H32B110
H7A—C7—H7B110H32A—C32—H32C109
C11—C12—H12B109H32B—C32—H32C110
C11—C12—H12C109C31—C33—H33A109
H12B—C12—H12C109C31—C33—H33B109
H12A—C12—H12B109C31—C33—H33C110
C11—C12—H12A109H33A—C33—H33B109
H12A—C12—H12C109H33A—C33—H33C109
C11—C13—H13C109H33B—C33—H33C109
H13A—C13—H13B109C31—C34—H34A109
C11—C13—H13B109C31—C34—H34B109
C11—C13—H13A109C31—C34—H34C109
H13B—C13—H13C109H34A—C34—H34B109
H13A—C13—H13C110H34A—C34—H34C109
C11—C14—H14C109H34B—C34—H34C109
D—H···AD—HH···AD···AD—H···A
N8—H8···O290.862.092.939 (2)169
N28—H28···O90.862.082.924 (3)168
C6—H6C···O290.962.543.434 (4)154
C27—H27C···O90.962.573.442 (4)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N8—H8⋯O290.862.092.939 (2)169
N28—H28⋯O90.862.082.924 (3)168
C6—H6C⋯O290.962.543.434 (4)154
C27—H27C⋯O90.962.573.442 (4)151
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

3.  Serine and threonine beta-lactones: a new class of hepatitis A virus 3C cysteine proteinase inhibitors.

Authors:  Manjinder S Lall; Yeeman K Ramtohul; Michael N G James; John C Vederas
Journal:  J Org Chem       Date:  2002-03-08       Impact factor: 4.354

4.  tert-Butyl N-[(S)-3-isobutyl-2-oxooxetan-3-yl]carbamate.

Authors:  Lesław Sieroń; Adam Kudaj; Aleksandra Olma; Janina Karolak-Wojciechowska
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06

5.  Enantioselective synthesis of alpha-methyl-D-cysteine and lanthionine building blocks via alpha-methyl-D-serine-beta-lactone.

Authors:  Nicole D Smith; Murray Goodman
Journal:  Org Lett       Date:  2003-04-03       Impact factor: 6.005

  5 in total

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