Literature DB >> 21200772

tert-Butyl N-[(S)-3-isobutyl-2-oxooxetan-3-yl]carbamate.

Lesław Sieroń, Adam Kudaj, Aleksandra Olma, Janina Karolak-Wojciechowska.   

Abstract

The structure of the title compound, C(12)H(21)NO(4), contains two crystallographically independent mol-ecules in the asymmetric unit. Mol-ecules are linked into pseudosymmetric R(2) (2)(8) dimers through two N-H⋯O hydrogen bonds. The dimers are connected by weak C-H⋯O inter-actions, resulting in a three-dimensional network.

Entities:  

Year:  2007        PMID: 21200772      PMCID: PMC2915268          DOI: 10.1107/S1600536807063866

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Etter et al. (1990 ▶); Olma (2004 ▶); Olma & Kudaj (2005 ▶); Pansare et al. (1991 ▶); Smith & Goodman (2003 ▶); Yang & Romo (1999 ▶).

Experimental

Crystal data

C12H21NO4 M = 243.30 Triclinic, a = 6.1642 (7) Å b = 11.2018 (16) Å c = 11.6915 (14) Å α = 115.936 (14)° β = 100.621 (10)° γ = 95.362 (11)° V = 699.58 (19) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.25 × 0.20 × 0.10 mm

Data collection

KUMA KM4CCD diffractometer Absorption correction: none 7367 measured reflections 2451 independent reflections 1367 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.118 S = 0.96 2451 reflections 317 parameters 3 restraints H-atom parameters constrained Δρmax = 0.12 e Å−3 Δρmin = −0.12 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXTL (Bruker, 2000 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and POV-RAY (Persistence of Vision, 2004 ▶); software used to prepare material for publication: PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807063866/sg2209sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807063866/sg2209Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H21NO4Z = 2
Mr = 243.30F000 = 264
Triclinic, P1Dx = 1.155 Mg m3
Hall symbol: P 1Melting point = 382–383 K
a = 6.1642 (7) ÅMo Kα radiation λ = 0.71073 Å
b = 11.2018 (16) ÅCell parameters from 4065 reflections
c = 11.6915 (14) Åθ = 3.4–26.0º
α = 115.936 (14)ºµ = 0.09 mm1
β = 100.621 (10)ºT = 293 K
γ = 95.362 (11)ºRectangular plate, colourless
V = 699.58 (19) Å30.25 × 0.20 × 0.10 mm
KUMA KM4CCD diffractometer1367 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.032
Detector resolution: 8.2356 pixels mm-1θmax = 25.0º
T = 293 Kθmin = 3.4º
ω scansh = −7→7
Absorption correction: nonek = −13→12
7367 measured reflectionsl = −13→13
2451 independent reflections
Refinement on F2Secondary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.118  w = 1/[σ2(Fo2) + (0.062P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max < 0.001
2451 reflectionsΔρmax = 0.12 e Å3
317 parametersΔρmin = −0.12 e Å3
3 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.4399 (10)0.1757 (5)0.4830 (5)0.109 (2)
O21.1035 (11)0.2386 (5)0.4645 (6)0.142 (3)
O91.1871 (6)0.1402 (4)0.0465 (4)0.0732 (16)
O101.4040 (5)0.2338 (4)0.2538 (3)0.0632 (12)
N81.1595 (7)0.0423 (5)0.1767 (4)0.0608 (17)
C21.2281 (16)0.1651 (7)0.4225 (7)0.094 (4)
C31.2177 (8)0.0381 (6)0.3000 (5)0.056 (2)
C41.4709 (10)0.0600 (7)0.3684 (7)0.080 (3)
C51.0644 (10)−0.0818 (6)0.2932 (6)0.065 (2)
C61.0612 (10)−0.2220 (6)0.1830 (6)0.071 (2)
C71.2908 (11)−0.2562 (7)0.1790 (6)0.084 (3)
C80.9089 (13)−0.3259 (7)0.1990 (9)0.116 (4)
C91.2485 (9)0.1394 (6)0.1522 (6)0.057 (2)
C111.5447 (9)0.3418 (6)0.2464 (6)0.0630 (19)
C121.6836 (12)0.2758 (8)0.1487 (7)0.108 (3)
C131.4015 (13)0.4276 (8)0.2093 (10)0.129 (4)
C141.6964 (11)0.4200 (7)0.3820 (7)0.093 (3)
O210.5614 (6)−0.1756 (4)−0.4839 (4)0.0800 (16)
O220.3389 (6)−0.0513 (4)−0.3675 (4)0.0866 (16)
O290.7503 (6)−0.1196 (4)−0.0326 (4)0.0771 (17)
O300.5507 (5)−0.2205 (4)−0.2453 (3)0.0622 (16)
N280.8048 (6)−0.0325 (4)−0.1694 (4)0.0567 (17)
C220.5175 (10)−0.0792 (7)−0.3759 (6)0.066 (3)
C230.7590 (8)−0.0328 (6)−0.2933 (6)0.052 (2)
C240.7917 (9)−0.1606 (6)−0.4128 (6)0.071 (2)
C250.8812 (9)0.0973 (5)−0.2828 (6)0.058 (2)
C260.8569 (10)0.2326 (6)−0.1764 (6)0.067 (2)
C270.6166 (11)0.2527 (7)−0.1836 (7)0.091 (3)
C281.0010 (13)0.3476 (7)−0.1818 (8)0.104 (3)
C290.7063 (9)−0.1247 (6)−0.1397 (6)0.055 (2)
C310.3953 (9)−0.3211 (6)−0.2350 (6)0.063 (2)
C320.2568 (11)−0.2483 (9)−0.1438 (8)0.107 (3)
C330.5216 (11)−0.4104 (8)−0.1981 (9)0.108 (3)
C340.2499 (10)−0.3999 (7)−0.3762 (6)0.091 (3)
H4A1.50880−0.013800.385400.0960*
H4B1.574100.083800.324900.0960*
H5A1.10960−0.083500.376400.0780*
H5B0.91190−0.065600.284000.0780*
H60.99370−0.224500.099100.0850*
H7A1.36120−0.253100.260800.1260*
H7B1.38140−0.191700.164900.1260*
H7C1.27650−0.345400.108600.1260*
H81.05900−0.023200.113600.0730*
H8A0.90490−0.415000.131100.1740*
H8B0.75960−0.307100.192500.1740*
H8C0.96630−0.321000.283300.1740*
H12A1.743900.206900.164600.1610*
H12B1.804900.343000.159200.1610*
H12C1.589600.235800.060800.1610*
H13A1.309200.374300.121300.1930*
H13B1.496900.503300.214100.1930*
H13C1.307200.459800.268800.1930*
H14A1.609600.433500.445500.1400*
H14B1.766700.506200.394100.1400*
H14C1.809900.370300.393600.1400*
H24A0.90530−0.14110−0.453100.0860*
H24B0.81610−0.23510−0.394000.0860*
H25A0.831200.09650−0.366900.0700*
H25B1.040400.09470−0.270000.0700*
H260.917200.23590−0.091200.0800*
H27A0.554900.25370−0.264700.1370*
H27B0.613500.33720−0.111100.1370*
H27C0.528700.17990−0.179400.1370*
H280.905600.03320−0.106700.0680*
H28A0.949800.34450−0.265900.1560*
H28B1.155400.33770−0.169100.1560*
H28C0.988500.43280−0.113800.1560*
H32A0.14490−0.31310−0.142600.1600*
H32B0.18430−0.19110−0.173500.1600*
H32C0.35230−0.19400−0.056900.1600*
H33A0.63820−0.43120−0.243900.1630*
H33B0.42080−0.49270−0.221300.1630*
H33C0.58780−0.36520−0.105100.1630*
H34A0.34100−0.44600−0.433500.1370*
H34B0.18640−0.33820−0.402800.1370*
H34C0.13090−0.46490−0.380800.1370*
U11U22U33U12U13U23
O10.150 (5)0.095 (4)0.059 (3)−0.023 (3)−0.016 (3)0.040 (3)
O20.215 (6)0.089 (3)0.128 (4)0.045 (4)0.085 (4)0.038 (3)
O90.078 (2)0.077 (3)0.055 (3)−0.016 (2)−0.014 (2)0.040 (2)
O100.064 (2)0.063 (2)0.052 (2)−0.014 (2)−0.005 (2)0.030 (2)
N80.066 (3)0.060 (3)0.055 (3)−0.011 (2)−0.008 (2)0.039 (3)
C20.149 (8)0.068 (5)0.081 (6)0.021 (5)0.033 (5)0.048 (4)
C30.070 (4)0.058 (4)0.037 (3)0.007 (3)0.006 (3)0.024 (3)
C40.091 (5)0.077 (4)0.071 (4)0.000 (4)−0.007 (3)0.048 (4)
C50.077 (4)0.070 (4)0.066 (4)0.014 (3)0.023 (3)0.046 (4)
C60.080 (4)0.064 (4)0.071 (4)0.006 (3)0.005 (3)0.040 (4)
C70.112 (5)0.079 (4)0.073 (4)0.032 (4)0.028 (4)0.042 (4)
C80.125 (6)0.072 (4)0.158 (8)−0.008 (4)0.036 (5)0.064 (5)
C90.050 (3)0.068 (4)0.048 (4)0.001 (3)−0.006 (3)0.033 (4)
C110.062 (3)0.049 (3)0.071 (4)−0.006 (3)0.004 (3)0.030 (3)
C120.097 (5)0.123 (6)0.097 (6)−0.009 (5)0.037 (4)0.046 (5)
C130.108 (6)0.082 (5)0.203 (10)0.003 (5)−0.002 (6)0.091 (6)
C140.095 (5)0.075 (4)0.080 (5)−0.023 (4)0.001 (4)0.027 (4)
O210.087 (3)0.089 (3)0.041 (2)0.005 (2)0.007 (2)0.016 (2)
O220.063 (2)0.100 (3)0.093 (3)0.014 (2)0.004 (2)0.048 (2)
O290.086 (3)0.082 (3)0.061 (3)−0.016 (2)−0.014 (2)0.050 (3)
O300.063 (2)0.063 (3)0.053 (3)−0.010 (2)−0.002 (2)0.031 (2)
N280.060 (3)0.053 (3)0.050 (3)−0.008 (2)−0.006 (2)0.029 (2)
C220.056 (4)0.089 (5)0.065 (4)0.012 (3)0.008 (3)0.050 (4)
C230.042 (3)0.061 (4)0.058 (4)0.002 (3)0.006 (3)0.035 (3)
C240.060 (3)0.082 (4)0.054 (4)0.007 (3)0.011 (3)0.019 (3)
C250.059 (3)0.064 (4)0.055 (4)0.008 (3)0.013 (3)0.032 (3)
C260.077 (4)0.064 (4)0.070 (4)0.011 (3)0.014 (3)0.043 (3)
C270.094 (5)0.094 (5)0.077 (5)0.032 (4)0.018 (3)0.031 (4)
C280.123 (6)0.074 (5)0.112 (6)−0.001 (4)0.029 (4)0.044 (4)
C290.056 (4)0.047 (4)0.055 (4)−0.001 (3)−0.002 (3)0.027 (4)
C310.047 (3)0.072 (4)0.067 (4)−0.003 (3)0.008 (3)0.035 (4)
C320.078 (5)0.151 (7)0.086 (5)0.010 (5)0.029 (4)0.050 (5)
C330.084 (4)0.090 (5)0.157 (7)0.000 (4)−0.012 (5)0.082 (5)
C340.066 (4)0.085 (5)0.083 (5)−0.013 (4)−0.002 (4)0.017 (4)
O1—C21.333 (11)C12—H12A0.96
O1—C41.461 (9)C12—H12B0.96
O2—C21.189 (12)C12—H12C0.96
O9—C91.228 (8)C13—H13B0.96
O10—C91.319 (7)C13—H13A0.96
O10—C111.465 (8)C13—H13C0.96
O21—C221.350 (8)C14—H14B0.96
O21—C241.460 (7)C14—H14C0.96
O22—C221.182 (8)C14—H14A0.96
O29—C291.206 (8)C22—C231.518 (8)
O30—C311.470 (8)C23—C241.565 (9)
O30—C291.345 (7)C23—C251.520 (10)
N8—C31.443 (7)C25—C261.526 (9)
N8—C91.336 (9)C26—C271.512 (9)
N8—H80.8600C26—C281.527 (11)
N28—C231.422 (8)C31—C331.481 (12)
N28—C291.353 (9)C31—C341.530 (9)
N28—H280.8600C31—C321.495 (10)
C2—C31.499 (10)C24—H24A0.97
C3—C51.531 (10)C24—H24B0.97
C3—C41.560 (8)C25—H25A0.97
C5—C61.530 (9)C25—H25B0.97
C6—C81.524 (11)C26—H260.98
C6—C71.504 (10)C27—H27A0.96
C11—C141.497 (9)C27—H27B0.96
C11—C131.508 (12)C27—H27C0.96
C11—C121.525 (10)C28—H28A0.96
C4—H4B0.97C28—H28B0.96
C4—H4A0.97C28—H28C0.96
C5—H5B0.97C32—H32A0.96
C5—H5A0.97C32—H32B0.96
C6—H60.98C32—H32C0.96
C7—H7A0.96C33—H33A0.96
C7—H7C0.96C33—H33B0.96
C7—H7B0.96C33—H33C0.96
C8—H8B0.96C34—H34A0.96
C8—H8C0.96C34—H34B0.96
C8—H8A0.96C34—H34C0.96
C2—O1—C492.1 (5)H14A—C14—H14B109
C9—O10—C11122.9 (5)C11—C14—H14A109
C22—O21—C2491.9 (4)H14B—C14—H14C110
C29—O30—C31121.5 (4)C11—C14—H14B110
C3—N8—C9125.5 (5)C11—C14—H14C109
C3—N8—H8117O21—C22—O22125.3 (6)
C9—N8—H8117O22—C22—C23139.1 (6)
C23—N28—C29126.8 (5)O21—C22—C2395.6 (5)
C23—N28—H28117N28—C23—C24116.9 (6)
C29—N28—H28117N28—C23—C22118.4 (5)
O1—C2—C396.4 (7)C22—C23—C25114.2 (6)
O1—C2—O2126.8 (7)N28—C23—C25111.0 (5)
O2—C2—C3136.8 (8)C22—C23—C2481.9 (5)
N8—C3—C4119.1 (5)C24—C23—C25111.6 (5)
C2—C3—C5110.7 (5)O21—C24—C2389.3 (4)
N8—C3—C5109.9 (5)C23—C25—C26118.8 (5)
N8—C3—C2117.4 (6)C25—C26—C28109.3 (5)
C4—C3—C5115.0 (6)C25—C26—C27114.1 (5)
C2—C3—C482.3 (5)C27—C26—C28110.6 (6)
O1—C4—C388.8 (5)O29—C29—N28124.3 (6)
C3—C5—C6116.7 (5)O29—C29—O30125.2 (6)
C5—C6—C8107.9 (6)O30—C29—N28110.5 (5)
C7—C6—C8111.0 (6)O30—C31—C33110.2 (5)
C5—C6—C7113.8 (5)O30—C31—C34101.3 (5)
O9—C9—O10124.5 (6)C32—C31—C34110.5 (5)
O9—C9—N8122.8 (6)C33—C31—C34110.5 (6)
O10—C9—N8112.8 (5)C32—C31—C33114.9 (7)
C12—C11—C14109.6 (5)O30—C31—C32108.6 (6)
O10—C11—C14103.5 (5)O21—C24—H24A114
C12—C11—C13112.7 (6)O21—C24—H24B114
C13—C11—C14112.1 (7)C23—C24—H24A114
O10—C11—C13110.6 (5)C23—C24—H24B114
O10—C11—C12107.8 (6)H24A—C24—H24B111
C3—C4—H4A114C23—C25—H25A108
C3—C4—H4B114C23—C25—H25B108
O1—C4—H4B114C26—C25—H25A108
O1—C4—H4A114C26—C25—H25B108
H4A—C4—H4B111H25A—C25—H25B107
H5A—C5—H5B107C25—C26—H26107
C6—C5—H5B108C27—C26—H26108
C3—C5—H5A108C28—C26—H26108
C6—C5—H5A108C26—C27—H27A110
C3—C5—H5B108C26—C27—H27B109
C7—C6—H6108C26—C27—H27C109
C8—C6—H6108H27A—C27—H27B110
C5—C6—H6108H27A—C27—H27C109
C6—C7—H7C109H27B—C27—H27C109
C6—C7—H7A110C26—C28—H28A109
H7A—C7—H7B109C26—C28—H28B109
H7B—C7—H7C109C26—C28—H28C109
H7A—C7—H7C110H28A—C28—H28B109
C6—C7—H7B109H28A—C28—H28C110
C6—C8—H8A109H28B—C28—H28C109
C6—C8—H8B109C31—C32—H32A109
H8B—C8—H8C110C31—C32—H32B109
H8A—C8—H8B109C31—C32—H32C109
C6—C8—H8C109H32A—C32—H32B110
H8A—C8—H8C109H32A—C32—H32C110
C11—C12—H12B110H32B—C32—H32C109
C11—C12—H12C110C31—C33—H33A110
C11—C12—H12A109C31—C33—H33B109
H12A—C12—H12B109C31—C33—H33C109
H12A—C12—H12C109H33A—C33—H33B109
H12B—C12—H12C109H33A—C33—H33C109
C11—C13—H13C109H33B—C33—H33C109
H13A—C13—H13B109C31—C34—H34A110
H13A—C13—H13C109C31—C34—H34B109
C11—C13—H13B109C31—C34—H34C109
H13B—C13—H13C109H34A—C34—H34B109
C11—C13—H13A109H34A—C34—H34C109
H14A—C14—H14C109H34B—C34—H34C109
C4—O1—C2—O2−176.6 (9)O1—C2—C3—C5109.5 (6)
C4—O1—C2—C34.7 (6)O2—C2—C3—C5−69.0 (12)
C2—O1—C4—C3−4.5 (6)O1—C2—C3—N8−123.3 (6)
C11—O10—C9—O9−8.8 (9)O2—C2—C3—C4177.1 (11)
C11—O10—C9—N8172.5 (5)O2—C2—C3—N858.2 (13)
C9—O10—C11—C12−62.4 (7)N8—C3—C5—C656.6 (7)
C9—O10—C11—C1361.2 (8)C4—C3—C5—C6−81.1 (7)
C9—O10—C11—C14−178.5 (5)C2—C3—C5—C6−172.2 (6)
C22—O21—C24—C23−8.8 (5)N8—C3—C4—O1121.1 (6)
C24—O21—C22—O22−172.7 (8)C2—C3—C4—O14.0 (5)
C24—O21—C22—C239.1 (6)C5—C3—C4—O1−105.3 (6)
C31—O30—C29—O298.2 (9)C3—C5—C6—C8177.1 (6)
C31—O30—C29—N28−170.7 (5)C3—C5—C6—C753.4 (8)
C29—O30—C31—C3261.1 (7)O22—C22—C23—C24173.7 (11)
C29—O30—C31—C33−65.5 (7)O22—C22—C23—C25−76.2 (12)
C29—O30—C31—C34177.5 (5)O21—C22—C23—N28−124.8 (6)
C9—N8—C3—C247.2 (8)O21—C22—C23—C24−8.6 (5)
C3—N8—C9—O9−177.5 (5)O21—C22—C23—C25101.5 (6)
C3—N8—C9—O101.3 (8)O22—C22—C23—N2857.4 (14)
C9—N8—C3—C4−49.5 (9)N28—C23—C24—O21125.8 (5)
C9—N8—C3—C5174.8 (5)N28—C23—C25—C26−51.2 (7)
C29—N28—C23—C25172.4 (5)C22—C23—C25—C2685.9 (7)
C23—N28—C29—O30−0.8 (8)C24—C23—C25—C26176.6 (5)
C29—N28—C23—C24−58.1 (7)C25—C23—C24—O21−105.0 (5)
C23—N28—C29—O29−179.6 (6)C22—C23—C24—O217.9 (5)
C29—N28—C23—C2237.4 (9)C23—C25—C26—C28177.8 (6)
O1—C2—C3—C4−4.4 (6)C23—C25—C26—C27−57.9 (8)
D—H···AD—HH···AD···AD—H···A
N8—H8···O290.862.122.937 (6)158
N28—H28···O90.862.062.890 (6)162
C12—H12C···O90.962.553.049 (9)112
C13—H13A···O90.962.362.941 (11)118
C27—H27C···O220.962.533.209 (9)127
C32—H32C···O290.962.443.018 (9)119
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N8—H8⋯O290.862.122.937 (6)158
N28—H28⋯O90.862.062.890 (6)162
C12—H12C⋯O90.962.553.049 (9)112
C13—H13A⋯O90.962.362.941 (11)118
C27—H27C⋯O220.962.533.209 (9)127
C32—H32C⋯O290.962.443.018 (9)119
  2 in total

1.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

2.  Enantioselective synthesis of alpha-methyl-D-cysteine and lanthionine building blocks via alpha-methyl-D-serine-beta-lactone.

Authors:  Nicole D Smith; Murray Goodman
Journal:  Org Lett       Date:  2003-04-03       Impact factor: 6.005

  2 in total
  1 in total

1.  tert-Butyl N-[(S)-3-isopropyl-2-oxo-oxetan-3-yl]carbamate.

Authors:  Lesław Sieroń; Adam Kudaj; Aleksandra Olma; Janina Karolak-Wojciechowska
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-02-06
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.