| Literature DB >> 21201791 |
Hoong-Kun Fun, P S Patil, S M Dharmaprakash, Suchada Chantrapromma, Ibrahim Abdul Razak.
Abstract
In the title chalcone derivative, C(13)H(8)Cl(2)OS, the prop-2-en-1-one unit and the thio-phene and 2,4-dichloro-phenyl rings are each essentially planar. The inter-planar angle between the thio-phene and 2,4-dichloro-phenyl rings is 19.87 (6)°. Weak intra-molecular C-H⋯O and C-H⋯Cl inter-actions involving the prop-2-en-1-one unit generate an S(5)S(5) ring motif. In the crystal structure, mol-ecules are linked into head-to-tail zigzag chains along the a axis and adjacent chains are cross-linked. These cross-linked chains are arranged into sheets parallel to the ab plane. The crystal structure is stabilized by weak C-H⋯O, C-H⋯Cl and C-H⋯π inter-actions. A π-π inter-action was also observed with a centroid-centroid distance of 3.6845 (6) Å.Entities:
Year: 2008 PMID: 21201791 PMCID: PMC2960483 DOI: 10.1107/S1600536808026524
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H8Cl2OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4435 reflections |
| θ = 2.4–32.5º | |
| µ = 0.68 mm−1 | |
| β = 118.735 (3)º | Needle, colorless |
| 0.58 × 0.24 × 0.13 mm | |
| Bruker SMART APEX2 CCD area-detector diffractometer | 4435 independent reflections |
| Radiation source: fine-focus sealed tube | 3831 reflections with |
| Monochromator: graphite | |
| Detector resolution: 8.33 pixels mm-1 | θmax = 32.5º |
| θmin = 2.4º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | |
| 41878 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 4435 reflections | Δρmax = 0.60 e Å−3 |
| 162 parameters | Δρmin = −0.28 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | −0.05796 (3) | 0.558919 (18) | 0.18442 (3) | 0.01990 (7) | |
| Cl2 | −0.34903 (3) | 0.43921 (2) | 0.48214 (3) | 0.02181 (7) | |
| S1 | 0.55248 (3) | 0.18039 (2) | 0.20853 (3) | 0.02097 (7) | |
| O1 | 0.30678 (11) | 0.32994 (6) | 0.13125 (9) | 0.02122 (16) | |
| C1 | 0.64865 (14) | 0.08866 (9) | 0.32542 (13) | 0.0239 (2) | |
| H1A | 0.7245 | 0.0504 | 0.3162 | 0.042 (5)* | |
| C2 | 0.60409 (14) | 0.07946 (9) | 0.43128 (13) | 0.0222 (2) | |
| H2A | 0.6448 | 0.0331 | 0.5039 | 0.030 (4)* | |
| C3 | 0.48923 (13) | 0.14851 (8) | 0.41751 (12) | 0.01776 (19) | |
| H3A | 0.4462 | 0.1531 | 0.4802 | 0.025 (4)* | |
| C4 | 0.44866 (12) | 0.20851 (7) | 0.29930 (11) | 0.01483 (17) | |
| C5 | 0.32870 (12) | 0.28469 (7) | 0.24030 (11) | 0.01551 (18) | |
| C6 | 0.23178 (13) | 0.30140 (8) | 0.31373 (11) | 0.01662 (18) | |
| H6A | 0.2532 | 0.2670 | 0.3972 | 0.033 (4)* | |
| C7 | 0.11366 (13) | 0.36566 (7) | 0.26054 (12) | 0.01658 (18) | |
| H7A | 0.0995 | 0.4012 | 0.1800 | 0.022 (4)* | |
| C8 | 0.00490 (12) | 0.38454 (7) | 0.31897 (11) | 0.01508 (17) | |
| C9 | −0.01998 (13) | 0.31711 (8) | 0.40561 (12) | 0.01814 (19) | |
| H9A | 0.0373 | 0.2601 | 0.4292 | 0.032 (4)* | |
| C10 | −0.12712 (13) | 0.33288 (8) | 0.45700 (12) | 0.01822 (19) | |
| H10A | −0.1418 | 0.2872 | 0.5141 | 0.030 (4)* | |
| C11 | −0.21239 (12) | 0.41837 (8) | 0.42150 (12) | 0.01651 (18) | |
| C12 | −0.19070 (12) | 0.48797 (7) | 0.33822 (11) | 0.01626 (18) | |
| H12A | −0.2472 | 0.5453 | 0.3164 | 0.023 (4)* | |
| C13 | −0.08277 (12) | 0.47006 (7) | 0.28828 (11) | 0.01535 (18) |
| Cl1 | 0.02152 (13) | 0.01786 (12) | 0.02316 (13) | 0.00278 (8) | 0.01301 (10) | 0.00674 (9) |
| Cl2 | 0.02120 (13) | 0.02533 (13) | 0.02547 (14) | 0.00247 (9) | 0.01647 (11) | 0.00112 (10) |
| S1 | 0.02269 (14) | 0.02431 (14) | 0.02117 (13) | 0.00481 (10) | 0.01474 (11) | 0.00138 (10) |
| O1 | 0.0269 (4) | 0.0218 (4) | 0.0201 (4) | 0.0047 (3) | 0.0155 (3) | 0.0046 (3) |
| C1 | 0.0216 (5) | 0.0255 (5) | 0.0248 (5) | 0.0084 (4) | 0.0113 (4) | 0.0015 (4) |
| C2 | 0.0221 (5) | 0.0233 (5) | 0.0201 (5) | 0.0049 (4) | 0.0092 (4) | 0.0019 (4) |
| C3 | 0.0195 (5) | 0.0187 (4) | 0.0167 (4) | 0.0009 (4) | 0.0100 (4) | −0.0006 (4) |
| C4 | 0.0159 (4) | 0.0156 (4) | 0.0155 (4) | 0.0001 (3) | 0.0096 (4) | −0.0013 (3) |
| C5 | 0.0176 (4) | 0.0152 (4) | 0.0154 (4) | −0.0004 (3) | 0.0093 (4) | −0.0019 (3) |
| C6 | 0.0191 (5) | 0.0178 (4) | 0.0159 (4) | 0.0006 (4) | 0.0107 (4) | −0.0001 (3) |
| C7 | 0.0191 (4) | 0.0160 (4) | 0.0178 (4) | 0.0001 (3) | 0.0114 (4) | −0.0007 (3) |
| C8 | 0.0162 (4) | 0.0147 (4) | 0.0154 (4) | 0.0005 (3) | 0.0084 (4) | −0.0001 (3) |
| C9 | 0.0211 (5) | 0.0148 (4) | 0.0216 (5) | 0.0023 (3) | 0.0127 (4) | 0.0018 (4) |
| C10 | 0.0215 (5) | 0.0162 (4) | 0.0208 (5) | 0.0005 (4) | 0.0133 (4) | 0.0016 (4) |
| C11 | 0.0160 (4) | 0.0187 (4) | 0.0170 (4) | 0.0000 (3) | 0.0097 (4) | −0.0015 (3) |
| C12 | 0.0155 (4) | 0.0162 (4) | 0.0173 (4) | 0.0018 (3) | 0.0081 (4) | 0.0006 (3) |
| C13 | 0.0158 (4) | 0.0148 (4) | 0.0154 (4) | −0.0003 (3) | 0.0075 (3) | 0.0016 (3) |
| Cl1—C13 | 1.7396 (10) | C6—C7 | 1.3367 (15) |
| Cl2—C11 | 1.7310 (11) | C6—H6A | 0.9300 |
| S1—C1 | 1.7033 (12) | C7—C8 | 1.4629 (14) |
| S1—C4 | 1.7186 (10) | C7—H7A | 0.9300 |
| O1—C5 | 1.2317 (13) | C8—C13 | 1.4042 (14) |
| C1—C2 | 1.3720 (17) | C8—C9 | 1.4048 (15) |
| C1—H1A | 0.9425 | C9—C10 | 1.3858 (16) |
| C2—C3 | 1.4160 (16) | C9—H9A | 0.9300 |
| C2—H2A | 0.9300 | C10—C11 | 1.3912 (15) |
| C3—C4 | 1.3865 (15) | C10—H10A | 0.9301 |
| C3—H3A | 0.9302 | C11—C12 | 1.3862 (15) |
| C4—C5 | 1.4656 (14) | C12—C13 | 1.3866 (15) |
| C5—C6 | 1.4806 (14) | C12—H12A | 0.9299 |
| C1—S1—C4 | 91.72 (6) | C6—C7—H7A | 117.4 |
| C2—C1—S1 | 112.39 (9) | C8—C7—H7A | 117.4 |
| C2—C1—H1A | 125.7 | C13—C8—C9 | 116.67 (9) |
| S1—C1—H1A | 121.9 | C13—C8—C7 | 121.62 (9) |
| C1—C2—C3 | 112.43 (11) | C9—C8—C7 | 121.69 (9) |
| C1—C2—H2A | 123.8 | C10—C9—C8 | 122.10 (10) |
| C3—C2—H2A | 123.8 | C10—C9—H9A | 119.0 |
| C4—C3—C2 | 111.85 (10) | C8—C9—H9A | 118.9 |
| C4—C3—H3A | 124.1 | C9—C10—C11 | 118.74 (10) |
| C2—C3—H3A | 124.1 | C9—C10—H10A | 120.6 |
| C3—C4—C5 | 129.85 (9) | C11—C10—H10A | 120.6 |
| C3—C4—S1 | 111.60 (8) | C12—C11—C10 | 121.53 (10) |
| C5—C4—S1 | 118.44 (8) | C12—C11—Cl2 | 118.77 (8) |
| O1—C5—C4 | 120.84 (9) | C10—C11—Cl2 | 119.70 (8) |
| O1—C5—C6 | 122.07 (10) | C11—C12—C13 | 118.37 (10) |
| C4—C5—C6 | 117.04 (9) | C11—C12—H12A | 120.8 |
| C7—C6—C5 | 120.30 (10) | C13—C12—H12A | 120.8 |
| C7—C6—H6A | 119.9 | C12—C13—C8 | 122.57 (9) |
| C5—C6—H6A | 119.8 | C12—C13—Cl1 | 117.25 (8) |
| C6—C7—C8 | 125.15 (10) | C8—C13—Cl1 | 120.18 (8) |
| C4—S1—C1—C2 | −0.23 (10) | C6—C7—C8—C9 | −21.13 (17) |
| S1—C1—C2—C3 | −0.06 (14) | C13—C8—C9—C10 | 0.92 (16) |
| C1—C2—C3—C4 | 0.42 (15) | C7—C8—C9—C10 | −177.58 (10) |
| C2—C3—C4—C5 | 175.55 (11) | C8—C9—C10—C11 | −0.07 (17) |
| C2—C3—C4—S1 | −0.59 (12) | C9—C10—C11—C12 | −0.93 (17) |
| C1—S1—C4—C3 | 0.47 (9) | C9—C10—C11—Cl2 | 179.10 (9) |
| C1—S1—C4—C5 | −176.16 (9) | C10—C11—C12—C13 | 0.99 (16) |
| C3—C4—C5—O1 | −178.54 (11) | Cl2—C11—C12—C13 | −179.04 (8) |
| S1—C4—C5—O1 | −2.62 (14) | C11—C12—C13—C8 | −0.07 (16) |
| C3—C4—C5—C6 | −1.06 (16) | C11—C12—C13—Cl1 | −179.86 (8) |
| S1—C4—C5—C6 | 174.85 (7) | C9—C8—C13—C12 | −0.86 (15) |
| O1—C5—C6—C7 | 1.53 (16) | C7—C8—C13—C12 | 177.65 (10) |
| C4—C5—C6—C7 | −175.91 (10) | C9—C8—C13—Cl1 | 178.93 (8) |
| C5—C6—C7—C8 | 176.55 (10) | C7—C8—C13—Cl1 | −2.57 (14) |
| C6—C7—C8—C13 | 160.45 (11) |
| H··· | ||||
| C3—H3A···O1i | 0.93 | 2.52 | 3.4512 (17) | 175 |
| C7—H7A···Cl1 | 0.93 | 2.68 | 3.0573 (11) | 105 |
| C7—H7A···O1 | 0.93 | 2.48 | 2.8116 (17) | 101 |
| C10—H10A···Cg1ii | 0.93 | 3.33 | 3.8233 (13) | 115 |
| C12—H12A···Cg1iii | 0.93 | 2.87 | 3.6907 (13) | 148 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C3—H3 | 0.93 | 2.52 | 3.4512 (17) | 175 |
| C7—H7 | 0.93 | 2.68 | 3.0573 (11) | 105 |
| C7—H7 | 0.93 | 2.48 | 2.8116 (17) | 101 |
| C10—H10 | 0.93 | 3.33 | 3.8233 (13) | 115 |
| C12—H12 | 0.93 | 2.87 | 3.6907 (13) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) . Cg1 is the centroid of the S1/C1–C4 ring.