Literature DB >> 21201760

3,3'-Di-2-naphthoyl-1,1'-(o-phenyl-ene)dithio-urea.

Hai-Tang Du, Hai-Jun Du, Weiyi Zhou.   

Abstract

In the mol-ecule of the title compound, C(30)H(22)N(4)O(2)S(2), the central benzene ring is oriented at dihedral angles of 63.83 (3) and 1.37 (3)° with respect to the naphthalene ring systems, while the two naphthalene ring systems are oriented at a dihedral angle of 62.78 (3)°. Intra-molecular N-H⋯O and N-H⋯N hydrogen bonds result in the formation of one five- and two six-membered rings. The twisting modes of the two side arms are different [C-N-C-O and C-N-C-N torsion angles = 11.1 (4) and 1.5 (3)°, respectively, in one arm, and -2.2 (4) and 0.8 (3)° in the other arm]. In the crystal structure, inter-molecular N-H⋯S hydrogen bonds link the mol-ecules into centrosymmetric dimers. There is a C-H⋯π contact between the naphthalene rings and π-π contacts between the naphthalene rings and the naphthalene and benzene rings [centroid-centroid distances = 3.651 (1), 3.828 (1), 3.811 (2) and 3.786 (1) Å].

Entities:  

Year:  2008        PMID: 21201760      PMCID: PMC2960656          DOI: 10.1107/S1600536808026299

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Thiam et al. (2008 ▶). For ring conformation puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C30H22N4O2S2 M = 534.64 Triclinic, a = 8.7135 (17) Å b = 12.453 (3) Å c = 12.541 (3) Å α = 72.33 (3)° β = 74.55 (3)° γ = 78.89 (3)° V = 1240.5 (6) Å3 Z = 2 Mo Kα radiation μ = 0.25 mm−1 T = 113 (2) K 0.10 × 0.08 × 0.04 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.975, T max = 0.990 7203 measured reflections 4337 independent reflections 3311 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.130 S = 1.07 4337 reflections 355 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.38 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808026299/hk2511sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026299/hk2511Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C30H22N4O2S2Z = 2
Mr = 534.64F000 = 556
Triclinic, P1Dx = 1.431 Mg m3
Hall symbol: -P 1Melting point: 489 K
a = 8.7135 (17) ÅMo Kα radiation λ = 0.71073 Å
b = 12.453 (3) ÅCell parameters from 2566 reflections
c = 12.541 (3) Åθ = 1.7–27.1º
α = 72.33 (3)ºµ = 0.25 mm1
β = 74.55 (3)ºT = 113 (2) K
γ = 78.89 (3)ºBlock, colorless
V = 1240.5 (6) Å30.10 × 0.08 × 0.04 mm
Rigaku Saturn CCD area-detector diffractometer4337 independent reflections
Radiation source: rotating anode3311 reflections with I > 2σ(I)
Monochromator: confocalRint = 0.055
Detector resolution: 7.31 pixels mm-1θmax = 25.0º
T = 113(2) Kθmin = 1.7º
ω and φ scansh = −9→10
Absorption correction: multi-scan(CrystalClear; Rigaku/MSC, 2005)k = −14→14
Tmin = 0.975, Tmax = 0.990l = −14→12
7203 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.130  w = 1/[σ2(Fo2) + (0.0613P)2] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
4337 reflectionsΔρmax = 0.32 e Å3
355 parametersΔρmin = −0.38 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.14334 (7)1.12794 (6)0.94643 (6)0.02210 (19)
S20.47504 (8)1.33865 (7)0.40927 (6)0.0302 (2)
O10.48084 (19)0.83813 (16)0.82983 (16)0.0242 (4)
O20.30123 (19)1.00328 (16)0.63446 (14)0.0231 (4)
N10.4251 (2)1.05227 (19)0.83207 (17)0.0178 (5)
H10.488 (3)0.992 (2)0.814 (2)0.021*
N20.2372 (2)0.92516 (18)0.90634 (17)0.0179 (5)
H2A0.146 (3)0.911 (2)0.941 (2)0.021*
N30.4218 (2)1.1856 (2)0.61854 (19)0.0199 (5)
H3A0.384 (3)1.124 (3)0.650 (3)0.024*
N40.3551 (2)1.1461 (2)0.47074 (19)0.0223 (5)
H4A0.356 (3)1.171 (3)0.397 (3)0.027*
C10.4825 (2)1.2304 (2)0.6873 (2)0.0173 (5)
C20.5430 (3)1.3339 (2)0.6541 (2)0.0219 (6)
H20.54351.38270.57920.026*
C30.6027 (3)1.3653 (2)0.7308 (2)0.0219 (6)
H30.64601.43530.70750.026*
C40.6001 (3)1.2962 (2)0.8410 (2)0.0240 (6)
H40.64071.31920.89270.029*
C50.5384 (3)1.1938 (2)0.8755 (2)0.0221 (6)
H50.53561.14650.95120.026*
C60.4806 (3)1.1607 (2)0.7992 (2)0.0172 (5)
C70.2774 (3)1.0316 (2)0.8916 (2)0.0168 (5)
C80.3352 (3)0.8358 (2)0.8680 (2)0.0178 (5)
C90.2575 (3)0.7382 (2)0.8759 (2)0.0181 (5)
C100.1037 (3)0.7483 (2)0.86101 (19)0.0175 (5)
H100.03950.81990.85350.021*
C110.0400 (3)0.6543 (2)0.8567 (2)0.0187 (5)
C12−0.1169 (3)0.6634 (2)0.8383 (2)0.0252 (6)
H12−0.18590.73270.83620.030*
C13−0.1691 (3)0.5734 (3)0.8237 (2)0.0302 (7)
H13−0.27310.58100.80980.036*
C14−0.0691 (3)0.4691 (3)0.8292 (2)0.0317 (7)
H14−0.10580.40720.81790.038*
C150.0794 (3)0.4564 (2)0.8507 (2)0.0286 (7)
H150.14440.38520.85600.034*
C160.1376 (3)0.5477 (2)0.8651 (2)0.0213 (6)
C170.2939 (3)0.5386 (2)0.8852 (2)0.0228 (6)
H170.35830.46700.89570.027*
C180.3520 (3)0.6298 (2)0.8896 (2)0.0217 (6)
H180.45710.62170.90190.026*
C190.4172 (3)1.2218 (2)0.5070 (2)0.0191 (6)
C200.2990 (3)1.0445 (2)0.5323 (2)0.0198 (6)
C210.2338 (3)0.9850 (2)0.4698 (2)0.0182 (6)
C220.2170 (3)1.0319 (2)0.3545 (2)0.0214 (6)
H220.25061.10390.31200.026*
C230.1522 (3)0.9726 (2)0.3048 (2)0.0247 (6)
H230.14221.00420.22750.030*
C240.0999 (3)0.8658 (2)0.3658 (2)0.0235 (6)
C250.0246 (3)0.8052 (3)0.3189 (2)0.0284 (7)
H250.01090.83560.24230.034*
C26−0.0282 (3)0.7038 (3)0.3824 (3)0.0317 (7)
H26−0.08080.66550.35010.038*
C27−0.0059 (3)0.6551 (3)0.4952 (3)0.0316 (7)
H27−0.04260.58410.53840.038*
C280.0691 (3)0.7109 (3)0.5422 (2)0.0280 (7)
H280.08690.67700.61740.034*
C290.1199 (3)0.8177 (2)0.4805 (2)0.0201 (6)
C300.1876 (3)0.8804 (2)0.5296 (2)0.0203 (6)
H300.20120.84900.60600.024*
U11U22U33U12U13U23
S10.0227 (3)0.0185 (4)0.0251 (3)−0.0060 (3)0.0016 (2)−0.0097 (3)
S20.0430 (4)0.0245 (5)0.0217 (4)−0.0143 (3)−0.0095 (3)0.0041 (3)
O10.0205 (9)0.0215 (12)0.0295 (10)−0.0025 (7)−0.0020 (7)−0.0084 (9)
O20.0329 (10)0.0215 (12)0.0157 (9)−0.0084 (8)−0.0052 (7)−0.0030 (9)
N10.0202 (10)0.0148 (13)0.0186 (10)−0.0048 (9)−0.0026 (8)−0.0046 (10)
N20.0182 (9)0.0161 (13)0.0189 (10)−0.0071 (9)0.0011 (8)−0.0053 (10)
N30.0232 (10)0.0165 (14)0.0209 (11)−0.0080 (9)−0.0033 (8)−0.0042 (10)
N40.0297 (11)0.0214 (14)0.0155 (11)−0.0066 (9)−0.0040 (9)−0.0031 (10)
C10.0167 (11)0.0154 (15)0.0191 (12)−0.0041 (10)−0.0018 (9)−0.0039 (11)
C20.0220 (12)0.0178 (16)0.0232 (13)−0.0021 (10)−0.0036 (10)−0.0029 (12)
C30.0199 (12)0.0147 (16)0.0309 (14)−0.0049 (10)−0.0019 (10)−0.0072 (12)
C40.0238 (12)0.0221 (17)0.0289 (14)−0.0046 (11)−0.0067 (10)−0.0091 (13)
C50.0231 (12)0.0234 (17)0.0199 (13)−0.0059 (11)−0.0037 (10)−0.0051 (12)
C60.0157 (11)0.0130 (15)0.0220 (12)−0.0036 (9)0.0002 (9)−0.0061 (11)
C70.0194 (11)0.0193 (16)0.0121 (11)−0.0046 (10)−0.0051 (9)−0.0022 (11)
C80.0222 (12)0.0156 (15)0.0150 (11)−0.0025 (10)−0.0052 (9)−0.0023 (11)
C90.0242 (12)0.0149 (15)0.0122 (11)−0.0052 (10)0.0012 (9)−0.0021 (11)
C100.0219 (11)0.0137 (15)0.0143 (12)−0.0014 (10)−0.0022 (9)−0.0022 (11)
C110.0242 (12)0.0192 (16)0.0116 (11)−0.0073 (10)−0.0002 (9)−0.0030 (11)
C120.0253 (13)0.0301 (18)0.0209 (13)−0.0062 (11)−0.0044 (10)−0.0070 (13)
C130.0243 (13)0.046 (2)0.0246 (14)−0.0168 (12)0.0006 (10)−0.0136 (15)
C140.0381 (15)0.035 (2)0.0268 (15)−0.0243 (13)0.0089 (12)−0.0161 (15)
C150.0372 (15)0.0231 (18)0.0237 (14)−0.0118 (12)0.0072 (11)−0.0108 (13)
C160.0279 (13)0.0179 (16)0.0160 (12)−0.0070 (10)0.0037 (9)−0.0062 (12)
C170.0255 (12)0.0164 (16)0.0214 (13)0.0006 (11)0.0019 (10)−0.0060 (12)
C180.0220 (12)0.0208 (16)0.0186 (12)−0.0014 (10)−0.0009 (10)−0.0037 (12)
C190.0211 (12)0.0155 (15)0.0201 (13)−0.0038 (10)−0.0033 (9)−0.0038 (12)
C200.0183 (12)0.0187 (16)0.0202 (13)−0.0028 (10)−0.0007 (9)−0.0048 (12)
C210.0189 (11)0.0175 (16)0.0162 (12)−0.0008 (10)−0.0011 (9)−0.0050 (12)
C220.0235 (12)0.0180 (16)0.0198 (13)−0.0019 (10)−0.0014 (10)−0.0041 (12)
C230.0245 (12)0.0300 (18)0.0188 (13)0.0060 (11)−0.0063 (10)−0.0095 (13)
C240.0153 (11)0.0304 (18)0.0263 (14)0.0049 (11)−0.0019 (10)−0.0166 (13)
C250.0225 (12)0.041 (2)0.0274 (14)0.0044 (12)−0.0082 (11)−0.0203 (15)
C260.0231 (13)0.040 (2)0.0413 (17)−0.0027 (12)−0.0042 (12)−0.0284 (17)
C270.0287 (14)0.033 (2)0.0354 (16)−0.0093 (12)0.0038 (12)−0.0188 (15)
C280.0298 (13)0.0314 (19)0.0235 (14)−0.0078 (12)0.0014 (11)−0.0124 (14)
C290.0173 (11)0.0248 (17)0.0191 (12)−0.0015 (10)0.0015 (9)−0.0125 (12)
C300.0213 (12)0.0244 (17)0.0149 (12)−0.0017 (10)−0.0006 (9)−0.0085 (12)
S1—C71.677 (2)C11—C121.424 (3)
S2—C191.657 (3)C12—C131.364 (4)
O1—C81.234 (3)C12—H120.9500
O2—C201.231 (3)C13—C141.412 (4)
N1—C71.334 (3)C13—H130.9500
N1—C61.427 (3)C14—C151.362 (4)
N1—H10.89 (2)C14—H140.9500
N2—C71.381 (3)C15—C161.407 (4)
N2—C81.392 (3)C15—H150.9500
N2—H2A0.82 (3)C16—C171.427 (3)
N3—C191.343 (3)C17—C181.350 (4)
N3—C11.409 (3)C17—H170.9500
N3—H3A0.83 (3)C18—H180.9500
N4—C201.372 (4)C20—C211.496 (3)
N4—C191.405 (3)C21—C301.367 (4)
N4—H4A0.88 (3)C21—C221.422 (3)
C1—C21.389 (4)C22—C231.371 (3)
C1—C61.405 (4)C22—H220.9500
C2—C31.387 (3)C23—C241.412 (4)
C2—H20.9500C23—H230.9500
C3—C41.385 (4)C24—C251.418 (3)
C3—H30.9500C24—C291.424 (4)
C4—C51.381 (4)C25—C261.363 (4)
C4—H40.9500C25—H250.9500
C5—C61.385 (3)C26—C271.409 (4)
C5—H50.9500C26—H260.9500
C8—C91.468 (3)C27—C281.374 (4)
C9—C101.379 (3)C27—H270.9500
C9—C181.427 (3)C28—C291.409 (4)
C10—C111.409 (3)C28—H280.9500
C10—H100.9500C29—C301.414 (3)
C11—C161.423 (3)C30—H300.9500
C7—N1—C6123.9 (2)C15—C14—C13120.6 (3)
C7—N1—H1114.4 (18)C15—C14—H14119.7
C6—N1—H1121.7 (18)C13—C14—H14119.7
C7—N2—C8127.1 (2)C14—C15—C16120.7 (3)
C7—N2—H2A118.4 (19)C14—C15—H15119.7
C8—N2—H2A114.5 (19)C16—C15—H15119.7
C19—N3—C1131.8 (2)C15—C16—C11119.4 (2)
C19—N3—H3A111.8 (19)C15—C16—C17122.4 (2)
C1—N3—H3A116.4 (19)C11—C16—C17118.2 (2)
C20—N4—C19129.6 (2)C18—C17—C16121.3 (2)
C20—N4—H4A119.2 (19)C18—C17—H17119.4
C19—N4—H4A111.2 (19)C16—C17—H17119.4
C2—C1—C6119.0 (2)C17—C18—C9120.8 (2)
C2—C1—N3126.2 (2)C17—C18—H18119.6
C6—C1—N3114.8 (2)C9—C18—H18119.6
C3—C2—C1119.5 (3)N3—C19—N4113.0 (2)
C3—C2—H2120.2N3—C19—S2129.7 (2)
C1—C2—H2120.2N4—C19—S2117.24 (19)
C4—C3—C2121.1 (3)O2—C20—N4122.1 (2)
C4—C3—H3119.5O2—C20—C21120.9 (2)
C2—C3—H3119.5N4—C20—C21117.0 (2)
C5—C4—C3120.0 (2)C30—C21—C22119.7 (2)
C5—C4—H4120.0C30—C21—C20116.7 (2)
C3—C4—H4120.0C22—C21—C20123.6 (2)
C4—C5—C6119.5 (3)C23—C22—C21119.7 (3)
C4—C5—H5120.2C23—C22—H22120.1
C6—C5—H5120.2C21—C22—H22120.1
C5—C6—C1120.9 (3)C22—C23—C24121.6 (2)
C5—C6—N1119.9 (2)C22—C23—H23119.2
C1—C6—N1119.2 (2)C24—C23—H23119.2
N1—C7—N2116.73 (19)C23—C24—C25122.9 (3)
N1—C7—S1123.0 (2)C23—C24—C29118.7 (2)
N2—C7—S1120.30 (17)C25—C24—C29118.4 (3)
O1—C8—N2121.6 (2)C26—C25—C24120.7 (3)
O1—C8—C9121.5 (2)C26—C25—H25119.6
N2—C8—C9116.90 (19)C24—C25—H25119.6
C10—C9—C18119.0 (2)C25—C26—C27121.0 (2)
C10—C9—C8123.1 (2)C25—C26—H26119.5
C18—C9—C8117.6 (2)C27—C26—H26119.5
C9—C10—C11121.3 (2)C28—C27—C26119.6 (3)
C9—C10—H10119.4C28—C27—H27120.2
C11—C10—H10119.4C26—C27—H27120.2
C10—C11—C16119.3 (2)C27—C28—C29120.9 (3)
C10—C11—C12122.2 (2)C27—C28—H28119.6
C16—C11—C12118.4 (2)C29—C28—H28119.6
C13—C12—C11120.6 (2)C28—C29—C30122.0 (2)
C13—C12—H12119.7C28—C29—C24119.4 (2)
C11—C12—H12119.7C30—C29—C24118.6 (3)
C12—C13—C14120.3 (2)C21—C30—C29121.7 (2)
C12—C13—H13119.9C21—C30—H30119.1
C14—C13—H13119.9C29—C30—H30119.1
C19—N3—C1—C26.0 (4)C10—C11—C16—C174.0 (3)
C19—N3—C1—C6−173.4 (2)C12—C11—C16—C17−179.1 (2)
C6—C1—C2—C31.1 (3)C15—C16—C17—C18174.6 (2)
N3—C1—C2—C3−178.3 (2)C11—C16—C17—C18−3.7 (4)
C1—C2—C3—C4−1.3 (3)C16—C17—C18—C91.0 (4)
C2—C3—C4—C50.5 (3)C10—C9—C18—C171.6 (4)
C3—C4—C5—C60.5 (3)C8—C9—C18—C17−172.9 (2)
C4—C5—C6—C1−0.6 (3)C1—N3—C19—N4175.7 (2)
C4—C5—C6—N1176.5 (2)C1—N3—C19—S2−3.4 (4)
C2—C1—C6—C5−0.2 (3)C20—N4—C19—N30.8 (3)
N3—C1—C6—C5179.30 (19)C20—N4—C19—S2−179.98 (18)
C2—C1—C6—N1−177.28 (19)C19—N4—C20—O2−2.2 (4)
N3—C1—C6—N12.2 (3)C19—N4—C20—C21177.61 (19)
C7—N1—C6—C584.1 (3)O2—C20—C21—C30−4.2 (3)
C7—N1—C6—C1−98.8 (3)N4—C20—C21—C30175.96 (18)
C6—N1—C7—N2173.5 (2)O2—C20—C21—C22175.2 (2)
C6—N1—C7—S1−6.2 (3)N4—C20—C21—C22−4.7 (3)
C8—N2—C7—N11.5 (3)C30—C21—C22—C231.0 (3)
C8—N2—C7—S1−178.83 (18)C20—C21—C22—C23−178.31 (18)
C7—N2—C8—O111.1 (4)C21—C22—C23—C240.5 (3)
C7—N2—C8—C9−169.4 (2)C22—C23—C24—C25176.6 (2)
O1—C8—C9—C10−146.3 (2)C22—C23—C24—C29−1.9 (3)
N2—C8—C9—C1034.2 (3)C23—C24—C25—C26−178.0 (2)
O1—C8—C9—C1827.9 (3)C29—C24—C25—C260.4 (3)
N2—C8—C9—C18−151.6 (2)C24—C25—C26—C27−1.6 (3)
C18—C9—C10—C11−1.3 (4)C25—C26—C27—C280.5 (3)
C8—C9—C10—C11172.9 (2)C26—C27—C28—C291.8 (3)
C9—C10—C11—C16−1.5 (4)C27—C28—C29—C30175.7 (2)
C9—C10—C11—C12−178.3 (2)C27—C28—C29—C24−3.0 (3)
C10—C11—C12—C13173.7 (2)C23—C24—C29—C28−179.69 (19)
C16—C11—C12—C13−3.1 (4)C25—C24—C29—C281.8 (3)
C11—C12—C13—C141.4 (4)C23—C24—C29—C301.6 (3)
C12—C13—C14—C150.9 (4)C25—C24—C29—C30−176.88 (19)
C13—C14—C15—C16−1.5 (4)C22—C21—C30—C29−1.3 (3)
C14—C15—C16—C11−0.3 (4)C20—C21—C30—C29178.12 (18)
C14—C15—C16—C17−178.6 (2)C28—C29—C30—C21−178.7 (2)
C10—C11—C16—C15−174.4 (2)C24—C29—C30—C21−0.1 (3)
C12—C11—C16—C152.5 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.89 (2)1.88 (3)2.624 (3)140 (2)
N2—H2A···S1i0.82 (3)2.60 (3)3.418 (2)178 (2)
N3—H3A···O20.83 (3)1.88 (3)2.613 (3)148 (3)
N3—H3A···N10.83 (3)2.28 (3)2.693 (3)111 (2)
C28—H28···Cg30.952.763.621 (2)152 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O10.89 (2)1.88 (3)2.624 (3)140 (2)
N2—H2A⋯S1i0.82 (3)2.60 (3)3.418 (2)178 (2)
N3—H3A⋯O20.83 (3)1.88 (3)2.613 (3)148 (3)
N3—H3A⋯N10.83 (3)2.28 (3)2.693 (3)111 (2)
C28—H28⋯Cg30.952.763.621 (2)152 (2)

Symmetry code: (i) . Cg3 is the centroid of the C11–C16 ring.

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Authors:  George M Sheldrick
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