Literature DB >> 21201758

2-(3,5-Di-tert-butyl-4-hydroxy-benzyl-sulfan-yl)nicotinic acid.

Shahirah Mansor1, Wagee A Yehye, Azhar Ariffin, Noorsaadah Abdul Rahman, Seik Weng Ng.   

Abstract

Two mol-ecules of the title compound, C(21)H(27)NO(3)S, are disposed about a center of inversion, generating an O-H⋯O hydrogen-bonded dimer.

Entities:  

Year:  2008        PMID: 21201758      PMCID: PMC2960523          DOI: 10.1107/S1600536808026056

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of hindered phenol-based anti­oxidants, see: Kim & Lee (2003 ▶); Um & Lee (2005 ▶).

Experimental

Crystal data

C21H27NO3S M = 373.50 Triclinic, a = 5.6305 (1) Å b = 9.3489 (2) Å c = 18.8749 (3) Å α = 85.505 (1)° β = 89.453 (1)° γ = 87.834 (1)° V = 989.77 (3) Å3 Z = 2 Mo Kα radiation μ = 0.18 mm−1 T = 100 (2) K 0.25 × 0.15 × 0.05 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.956, T max = 0.991 12688 measured reflections 4507 independent reflections 3746 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.127 S = 1.18 4507 reflections 239 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.75 e Å−3 Δρmin = −0.71 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808026056/tk2295sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026056/tk2295Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H27NO3SZ = 2
Mr = 373.50F000 = 400
Triclinic, P1Dx = 1.253 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 5.6305 (1) ÅCell parameters from 3920 reflections
b = 9.3489 (2) Åθ = 2.2–28.4º
c = 18.8749 (3) ŵ = 0.18 mm1
α = 85.505 (1)ºT = 100 (2) K
β = 89.453 (1)ºPrism, colorless
γ = 87.834 (1)º0.25 × 0.15 × 0.05 mm
V = 989.77 (3) Å3
Bruker SMART APEX diffractometer4507 independent reflections
Radiation source: fine-focus sealed tube3746 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.028
T = 100(2) Kθmax = 27.5º
ω scansθmin = 1.1º
Absorption correction: Multi-scan(SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.956, Tmax = 0.991k = −9→12
12688 measured reflectionsl = −24→24
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.127  w = 1/[σ2(Fo2) + (0.0642P)2 + 0.2102P] where P = (Fo2 + 2Fc2)/3
S = 1.18(Δ/σ)max = 0.001
4507 reflectionsΔρmax = 0.75 e Å3
239 parametersΔρmin = −0.71 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.58009 (7)0.68988 (5)0.60316 (2)0.01722 (13)
O10.0857 (2)0.63037 (14)0.42620 (6)0.0211 (3)
H1O−0.014 (4)0.566 (2)0.4379 (14)0.053 (8)*
O20.2215 (2)0.56848 (14)0.53598 (6)0.0222 (3)
O30.8816 (2)0.54828 (13)0.92906 (6)0.0161 (3)
H3O0.78480.49340.95030.024*
N10.7549 (3)0.87163 (16)0.50351 (7)0.0177 (3)
C10.2358 (3)0.64038 (19)0.47879 (9)0.0184 (4)
C20.4212 (3)0.74553 (19)0.46400 (8)0.0176 (4)
C30.4393 (3)0.8192 (2)0.39715 (9)0.0203 (4)
H30.33160.80150.36070.024*
C40.6135 (3)0.9179 (2)0.38393 (9)0.0214 (4)
H40.62840.96890.33860.026*
C50.7661 (3)0.9404 (2)0.43878 (9)0.0203 (4)
H50.88561.00870.42990.024*
C60.5857 (3)0.77544 (19)0.51655 (8)0.0165 (3)
C70.8320 (3)0.7718 (2)0.64204 (8)0.0171 (3)
H7A0.98000.74890.61590.021*
H7B0.80700.87750.63970.021*
C80.8498 (3)0.71171 (19)0.71821 (8)0.0149 (3)
C90.9743 (3)0.58333 (19)0.73576 (8)0.0152 (3)
H91.05140.53500.69900.018*
C100.9903 (3)0.52279 (18)0.80543 (8)0.0131 (3)
C110.8749 (3)0.59945 (18)0.85839 (8)0.0126 (3)
C120.7483 (3)0.73030 (18)0.84288 (8)0.0126 (3)
C130.7379 (3)0.78302 (18)0.77173 (8)0.0148 (3)
H130.65140.87060.75950.018*
C141.1234 (3)0.37706 (18)0.82171 (8)0.0151 (3)
C151.3288 (3)0.38746 (19)0.87432 (9)0.0184 (4)
H15A1.40890.29300.88320.028*
H15B1.26530.41960.91920.028*
H15C1.44260.45640.85410.028*
C160.9495 (3)0.2627 (2)0.85004 (10)0.0213 (4)
H16A0.82230.25630.81550.032*
H16B0.88070.28960.89520.032*
H16C1.03470.16950.85750.032*
C171.2390 (3)0.3219 (2)0.75437 (9)0.0233 (4)
H17A1.11580.30970.71930.035*
H17B1.32240.22950.76650.035*
H17C1.35250.39140.73450.035*
C180.6287 (3)0.81640 (18)0.90074 (8)0.0141 (3)
C190.8187 (3)0.8637 (2)0.95129 (9)0.0188 (4)
H19A0.90640.77890.97270.028*
H19B0.74150.91590.98880.028*
H19C0.92910.92650.92450.028*
C200.4410 (3)0.72805 (19)0.94254 (8)0.0164 (3)
H20A0.32260.69790.90960.025*
H20B0.36250.78690.97730.025*
H20C0.51840.64310.96740.025*
C210.4985 (3)0.95322 (19)0.86854 (9)0.0197 (4)
H21A0.37530.92720.83610.029*
H21B0.61231.01450.84230.029*
H21C0.42501.00530.90670.029*
U11U22U33U12U13U23
S10.0224 (2)0.0166 (2)0.0123 (2)−0.00013 (16)−0.00189 (15)0.00089 (15)
O10.0269 (7)0.0187 (7)0.0178 (6)−0.0001 (5)−0.0059 (5)−0.0022 (5)
O20.0291 (7)0.0214 (7)0.0161 (6)−0.0030 (5)−0.0045 (5)−0.0001 (5)
O30.0184 (6)0.0173 (6)0.0118 (5)0.0002 (5)0.0019 (4)0.0032 (5)
N10.0214 (7)0.0164 (8)0.0147 (6)0.0038 (6)0.0009 (5)0.0005 (6)
C10.0240 (8)0.0151 (9)0.0164 (8)0.0056 (7)−0.0031 (6)−0.0053 (7)
C20.0233 (8)0.0145 (9)0.0149 (8)0.0050 (7)−0.0009 (6)−0.0034 (6)
C30.0278 (9)0.0192 (10)0.0135 (8)0.0066 (7)−0.0025 (6)−0.0030 (7)
C40.0301 (9)0.0202 (10)0.0131 (7)0.0047 (7)0.0015 (7)0.0012 (7)
C50.0236 (9)0.0190 (9)0.0176 (8)0.0021 (7)0.0029 (7)0.0012 (7)
C60.0217 (8)0.0140 (9)0.0134 (7)0.0051 (7)0.0010 (6)−0.0015 (6)
C70.0193 (8)0.0175 (9)0.0143 (7)0.0010 (7)−0.0013 (6)0.0004 (6)
C80.0156 (7)0.0154 (9)0.0135 (7)−0.0001 (6)−0.0003 (6)−0.0001 (6)
C90.0154 (7)0.0163 (9)0.0143 (7)0.0008 (6)0.0003 (6)−0.0035 (6)
C100.0129 (7)0.0115 (8)0.0153 (7)−0.0007 (6)−0.0012 (6)−0.0017 (6)
C110.0123 (7)0.0132 (8)0.0122 (7)−0.0018 (6)−0.0013 (5)0.0000 (6)
C120.0121 (7)0.0125 (8)0.0135 (7)−0.0013 (6)−0.0003 (5)−0.0020 (6)
C130.0152 (7)0.0126 (8)0.0162 (8)0.0014 (6)−0.0009 (6)0.0004 (6)
C140.0154 (7)0.0125 (8)0.0172 (8)0.0013 (6)−0.0008 (6)−0.0016 (6)
C150.0145 (8)0.0162 (9)0.0242 (9)0.0035 (7)−0.0031 (6)−0.0011 (7)
C160.0190 (8)0.0137 (9)0.0312 (9)−0.0008 (7)−0.0021 (7)0.0000 (7)
C170.0285 (9)0.0186 (10)0.0224 (9)0.0108 (8)−0.0003 (7)−0.0045 (7)
C180.0155 (7)0.0120 (8)0.0147 (7)0.0009 (6)0.0011 (6)−0.0014 (6)
C190.0186 (8)0.0194 (9)0.0191 (8)−0.0016 (7)0.0014 (6)−0.0061 (7)
C200.0141 (7)0.0173 (9)0.0180 (8)−0.0001 (6)0.0020 (6)−0.0027 (7)
C210.0238 (9)0.0144 (9)0.0202 (8)0.0068 (7)0.0032 (7)−0.0017 (7)
S1—C61.7634 (16)C12—C131.395 (2)
S1—C71.8239 (17)C12—C181.542 (2)
O1—C11.321 (2)C13—H130.9500
O1—H1O0.850 (10)C14—C171.538 (2)
O2—C11.230 (2)C14—C161.538 (2)
O3—C111.3817 (18)C14—C151.542 (2)
O3—H3O0.8400C15—H15A0.9800
N1—C51.337 (2)C15—H15B0.9800
N1—C61.342 (2)C15—H15C0.9800
C1—C21.471 (3)C16—H16A0.9800
C2—C31.394 (2)C16—H16B0.9800
C2—C61.415 (2)C16—H16C0.9800
C3—C41.380 (3)C17—H17A0.9800
C3—H30.9500C17—H17B0.9800
C4—C51.385 (2)C17—H17C0.9800
C4—H40.9500C18—C211.536 (2)
C5—H50.9500C18—C191.540 (2)
C7—C81.505 (2)C18—C201.539 (2)
C7—H7A0.9900C19—H19A0.9800
C7—H7B0.9900C19—H19B0.9800
C8—C91.386 (2)C19—H19C0.9800
C8—C131.387 (2)C20—H20A0.9800
C9—C101.393 (2)C20—H20B0.9800
C9—H90.9500C20—H20C0.9800
C10—C111.414 (2)C21—H21A0.9800
C10—C141.541 (2)C21—H21B0.9800
C11—C121.405 (2)C21—H21C0.9800
C6—S1—C7100.24 (8)C17—C14—C10111.47 (13)
C1—O1—H1O109.8 (18)C16—C14—C10110.37 (13)
C11—O3—H3O126.6C17—C14—C15105.58 (13)
C5—N1—C6118.43 (15)C16—C14—C15110.68 (14)
O2—C1—O1122.91 (17)C10—C14—C15111.98 (14)
O2—C1—C2122.32 (15)C14—C15—H15A109.5
O1—C1—C2114.77 (15)C14—C15—H15B109.5
C3—C2—C6117.92 (17)H15A—C15—H15B109.5
C3—C2—C1120.55 (15)C14—C15—H15C109.5
C6—C2—C1121.54 (15)H15A—C15—H15C109.5
C4—C3—C2120.04 (16)H15B—C15—H15C109.5
C4—C3—H3120.0C14—C16—H16A109.5
C2—C3—H3120.0C14—C16—H16B109.5
C3—C4—C5117.91 (16)H16A—C16—H16B109.5
C3—C4—H4121.0C14—C16—H16C109.5
C5—C4—H4121.0H16A—C16—H16C109.5
N1—C5—C4123.84 (17)H16B—C16—H16C109.5
N1—C5—H5118.1C14—C17—H17A109.5
C4—C5—H5118.1C14—C17—H17B109.5
N1—C6—C2121.87 (15)H17A—C17—H17B109.5
N1—C6—S1115.97 (12)C14—C17—H17C109.5
C2—C6—S1122.16 (14)H17A—C17—H17C109.5
C8—C7—S1107.24 (11)H17B—C17—H17C109.5
C8—C7—H7A110.3C21—C18—C19107.13 (14)
S1—C7—H7A110.3C21—C18—C20106.49 (13)
C8—C7—H7B110.3C19—C18—C20110.50 (13)
S1—C7—H7B110.3C21—C18—C12111.61 (13)
H7A—C7—H7B108.5C19—C18—C12109.74 (13)
C9—C8—C13119.07 (14)C20—C18—C12111.26 (14)
C9—C8—C7120.60 (15)C18—C19—H19A109.5
C13—C8—C7120.31 (15)C18—C19—H19B109.5
C8—C9—C10122.24 (15)H19A—C19—H19B109.5
C8—C9—H9118.9C18—C19—H19C109.5
C10—C9—H9118.9H19A—C19—H19C109.5
C9—C10—C11116.84 (15)H19B—C19—H19C109.5
C9—C10—C14120.15 (14)C18—C20—H20A109.5
C11—C10—C14122.99 (14)C18—C20—H20B109.5
O3—C11—C12116.25 (13)H20A—C20—H20B109.5
O3—C11—C10121.08 (14)C18—C20—H20C109.5
C12—C11—C10122.67 (14)H20A—C20—H20C109.5
C13—C12—C11117.06 (14)H20B—C20—H20C109.5
C13—C12—C18120.13 (14)C18—C21—H21A109.5
C11—C12—C18122.80 (14)C18—C21—H21B109.5
C8—C13—C12122.10 (15)H21A—C21—H21B109.5
C8—C13—H13118.9C18—C21—H21C109.5
C12—C13—H13118.9H21A—C21—H21C109.5
C17—C14—C16106.52 (15)H21B—C21—H21C109.5
O2—C1—C2—C3176.46 (16)C9—C10—C11—O3−179.75 (14)
O1—C1—C2—C3−4.1 (2)C14—C10—C11—O31.8 (2)
O2—C1—C2—C6−3.6 (3)C9—C10—C11—C120.3 (2)
O1—C1—C2—C6175.85 (15)C14—C10—C11—C12−178.16 (15)
C6—C2—C3—C4−0.1 (2)O3—C11—C12—C13−179.46 (13)
C1—C2—C3—C4179.83 (16)C10—C11—C12—C130.5 (2)
C2—C3—C4—C5−0.1 (3)O3—C11—C12—C181.9 (2)
C6—N1—C5—C4−0.3 (3)C10—C11—C12—C18−178.11 (14)
C3—C4—C5—N10.3 (3)C9—C8—C13—C120.6 (2)
C5—N1—C6—C20.0 (2)C7—C8—C13—C12179.43 (15)
C5—N1—C6—S1−179.54 (12)C11—C12—C13—C8−1.0 (2)
C3—C2—C6—N10.2 (3)C18—C12—C13—C8177.73 (15)
C1—C2—C6—N1−179.77 (15)C9—C10—C14—C173.8 (2)
C3—C2—C6—S1179.70 (12)C11—C10—C14—C17−177.85 (15)
C1—C2—C6—S1−0.2 (2)C9—C10—C14—C16−114.38 (17)
C7—S1—C6—N1−1.21 (15)C11—C10—C14—C1664.0 (2)
C7—S1—C6—C2179.23 (14)C9—C10—C14—C15121.83 (16)
C6—S1—C7—C8178.80 (11)C11—C10—C14—C15−59.8 (2)
S1—C7—C8—C985.94 (17)C13—C12—C18—C212.6 (2)
S1—C7—C8—C13−92.91 (16)C11—C12—C18—C21−178.80 (15)
C13—C8—C9—C100.3 (2)C13—C12—C18—C19−116.01 (16)
C7—C8—C9—C10−178.57 (15)C11—C12—C18—C1962.6 (2)
C8—C9—C10—C11−0.7 (2)C13—C12—C18—C20121.40 (16)
C8—C9—C10—C14177.77 (15)C11—C12—C18—C20−60.00 (19)
D—H···AD—HH···AD···AD—H···A
O1—H1o···O2i0.85 (1)1.79 (1)2.640 (2)179 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1o⋯O2i0.85 (1)1.79 (1)2.640 (2)179 (3)

Symmetry code: (i) .

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