Literature DB >> 21201747

(3aS,7S,9aS,9bR)-3a,6,6,9a-Tetra-methyl-2-oxoperhydro-naphtho[2,1-b]furan-7-yl acetate.

Qing-Chun Huang, Bo-Gang Li, Yi-Peng Xie, Kai-Bei Yu, Guo-Lin Zhang.   

Abstract

THE TITLE COMPOUND (COMMON NAME: 3β-acet-oxy-8-epi-sclareolide), C(18)H(28)O(4), is a sclareolide derivative, which was synthesized from 9(11)-en-3β-acet-oxy-8-epi-sclareolide. In the mol-ecular structure, the two six-membered rings display chair conformations and the five-membered ring displays an envelope conformation. Weak inter-molecular C-H⋯O hydrogen bonding is present in the crystal structure.

Entities:  

Year:  2008        PMID: 21201747      PMCID: PMC2960644          DOI: 10.1107/S1600536808025737

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Choudhary et al. (2004 ▶); Quideau et al. (2002 ▶). For related structures, see: Devi et al. (2004 ▶); Bhattacharyya et al. (2006 ▶). For synthesis, see: Yang et al. (2006 ▶).

Experimental

Crystal data

C18H28O4 M = 308.40 Monoclinic, a = 10.1935 (5) Å b = 7.3226 (3) Å c = 11.3056 (4) Å β = 99.2940 (1)° V = 832.81 (6) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 153 (2) K 0.60 × 0.54 × 0.47 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: none 8195 measured reflections 2046 independent reflections 1943 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.086 S = 0.99 2046 reflections 205 parameters 1 restraint H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.14 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2004 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025737/xu2447sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025737/xu2447Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H28O4F000 = 336
Mr = 308.40Dx = 1.230 Mg m3
Monoclinic, P21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 7613 reflections
a = 10.1935 (5) Åθ = 3.3–27.5º
b = 7.3226 (3) ŵ = 0.09 mm1
c = 11.3056 (4) ÅT = 153 (2) K
β = 99.2940 (1)ºBlock, colourless
V = 832.81 (6) Å30.60 × 0.54 × 0.47 mm
Z = 2
Rigaku R-AXIS RAPID IP diffractometer1943 reflections with I > 2σ(I)
Radiation source: Rotating AnodeRint = 0.018
Monochromator: graphiteθmax = 27.5º
T = 153(2) Kθmin = 3.3º
ω scansh = −13→13
Absorption correction: nonek = −9→9
8195 measured reflectionsl = −14→12
2046 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.086  w = 1/[σ2(Fo2) + (0.0526P)2 + 0.1209P] where P = (Fo2 + 2Fc2)/3
S = 0.99(Δ/σ)max < 0.001
2046 reflectionsΔρmax = 0.20 e Å3
205 parametersΔρmin = −0.14 e Å3
1 restraintExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.065 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.15453 (13)0.2174 (2)0.55280 (13)0.0477 (4)
O20.10361 (18)0.3434 (4)0.37252 (14)0.0809 (6)
O30.78754 (11)0.58869 (17)0.86839 (11)0.0377 (3)
O40.77677 (15)0.8581 (2)0.96045 (15)0.0599 (4)
C10.44238 (16)0.6709 (2)0.70097 (15)0.0344 (3)
H1A0.41040.74640.62950.041*
H1B0.40250.71990.76870.041*
C20.59341 (16)0.6859 (2)0.73086 (15)0.0370 (4)
H2A0.63410.63950.66300.044*
H2B0.61940.81540.74430.044*
C30.64282 (15)0.5757 (2)0.84229 (14)0.0301 (3)
H30.60510.62900.91100.036*
C40.60784 (14)0.3708 (2)0.83267 (13)0.0280 (3)
C50.45489 (14)0.3533 (2)0.78539 (13)0.0259 (3)
H50.41020.39590.85290.031*
C60.40994 (16)0.1550 (2)0.76243 (16)0.0360 (4)
H6A0.43500.11210.68610.043*
H6B0.45510.07620.82770.043*
C70.25934 (17)0.1404 (3)0.75616 (17)0.0427 (4)
H7A0.23100.01750.72570.051*
H7B0.23880.15020.83860.051*
C80.17711 (15)0.2812 (3)0.67859 (15)0.0386 (4)
C90.24142 (15)0.4709 (3)0.66974 (15)0.0345 (3)
H90.21750.55070.73480.041*
C100.39595 (14)0.4729 (2)0.67643 (13)0.0275 (3)
C110.1657 (2)0.5373 (3)0.54912 (19)0.0482 (5)
H11A0.08240.60030.55950.058*
H11B0.22100.62130.50930.058*
C120.13711 (18)0.3637 (4)0.47870 (18)0.0523 (5)
C130.43749 (17)0.4084 (3)0.55821 (14)0.0384 (4)
H13A0.53470.40900.56630.046*
H13B0.40000.49090.49320.046*
H13C0.40430.28440.53990.046*
C140.03976 (18)0.2954 (4)0.7163 (2)0.0566 (6)
H14A−0.00280.17500.71020.068*
H14B−0.01530.38160.66350.068*
H14C0.04940.33880.79930.068*
C150.84029 (17)0.7424 (3)0.92062 (16)0.0399 (4)
C160.98747 (19)0.7482 (3)0.9221 (2)0.0523 (5)
H16A1.02790.83550.98300.063*
H16B1.00560.78640.84320.063*
H16C1.02520.62660.94110.063*
C170.69680 (16)0.2695 (3)0.75667 (16)0.0395 (4)
H17A0.65940.14850.73530.047*
H17B0.78630.25620.80280.047*
H17C0.70140.33930.68350.047*
C180.63524 (17)0.2918 (3)0.96055 (16)0.0410 (4)
H18A0.72520.32550.99870.049*
H18B0.62740.15850.95690.049*
H18C0.57050.34121.00740.049*
U11U22U33U12U13U23
O10.0391 (7)0.0550 (9)0.0468 (7)−0.0076 (6)0.0003 (5)−0.0144 (6)
O20.0773 (11)0.1122 (17)0.0453 (8)−0.0063 (12)−0.0140 (7)−0.0085 (11)
O30.0267 (6)0.0346 (6)0.0499 (7)−0.0043 (5)0.0006 (5)−0.0051 (5)
O40.0517 (8)0.0469 (8)0.0773 (10)−0.0032 (7)−0.0014 (7)−0.0222 (8)
C10.0347 (8)0.0271 (7)0.0390 (8)0.0021 (7)−0.0014 (6)0.0043 (6)
C20.0352 (8)0.0283 (8)0.0455 (9)−0.0064 (7)0.0008 (6)0.0055 (7)
C30.0243 (7)0.0283 (8)0.0365 (8)−0.0006 (6)0.0017 (5)−0.0027 (6)
C40.0223 (6)0.0265 (7)0.0347 (7)0.0003 (6)0.0027 (5)−0.0008 (6)
C50.0233 (6)0.0255 (7)0.0291 (7)0.0001 (5)0.0050 (5)−0.0019 (6)
C60.0320 (8)0.0273 (8)0.0477 (9)−0.0029 (7)0.0039 (7)0.0012 (7)
C70.0347 (9)0.0406 (10)0.0529 (10)−0.0109 (8)0.0072 (7)0.0021 (8)
C80.0267 (7)0.0466 (10)0.0418 (9)−0.0057 (7)0.0039 (6)−0.0079 (8)
C90.0268 (7)0.0371 (9)0.0382 (8)0.0044 (7)0.0006 (6)−0.0045 (7)
C100.0267 (6)0.0274 (7)0.0278 (7)0.0006 (6)0.0026 (5)−0.0010 (6)
C110.0353 (9)0.0544 (12)0.0501 (11)0.0060 (8)−0.0077 (8)0.0034 (9)
C120.0358 (9)0.0719 (14)0.0454 (10)−0.0014 (10)−0.0050 (7)−0.0045 (11)
C130.0367 (8)0.0486 (10)0.0301 (7)−0.0023 (7)0.0060 (6)−0.0045 (7)
C140.0300 (8)0.0750 (15)0.0665 (12)−0.0064 (10)0.0132 (8)−0.0086 (12)
C150.0383 (8)0.0364 (9)0.0415 (8)−0.0063 (7)−0.0041 (7)0.0003 (8)
C160.0373 (9)0.0492 (11)0.0660 (12)−0.0129 (9)−0.0051 (8)−0.0014 (10)
C170.0290 (7)0.0357 (9)0.0551 (10)0.0030 (7)0.0107 (7)−0.0073 (8)
C180.0372 (8)0.0409 (9)0.0419 (9)0.0002 (7)−0.0021 (6)0.0117 (7)
O1—C121.354 (3)C7—H7B0.9900
O1—C81.479 (2)C8—C141.532 (2)
O2—C121.203 (2)C8—C91.546 (3)
O3—C151.343 (2)C9—C111.534 (2)
O3—C31.4601 (18)C9—C101.565 (2)
O4—C151.197 (3)C9—H91.0000
C1—C21.526 (2)C10—C131.540 (2)
C1—C101.536 (2)C11—C121.504 (3)
C1—H1A0.9900C11—H11A0.9900
C1—H1B0.9900C11—H11B0.9900
C2—C31.512 (2)C13—H13A0.9800
C2—H2A0.9900C13—H13B0.9800
C2—H2B0.9900C13—H13C0.9800
C3—C41.542 (2)C14—H14A0.9800
C3—H31.0000C14—H14B0.9800
C4—C171.537 (2)C14—H14C0.9800
C4—C181.540 (2)C15—C161.498 (2)
C4—C51.5696 (18)C16—H16A0.9800
C5—C61.532 (2)C16—H16B0.9800
C5—C101.551 (2)C16—H16C0.9800
C5—H51.0000C17—H17A0.9800
C6—C71.529 (2)C17—H17B0.9800
C6—H6A0.9900C17—H17C0.9800
C6—H6B0.9900C18—H18A0.9800
C7—C81.516 (3)C18—H18B0.9800
C7—H7A0.9900C18—H18C0.9800
C12—O1—C8109.23 (16)C8—C9—C10116.08 (13)
C15—O3—C3117.60 (13)C11—C9—H9108.8
C2—C1—C10112.21 (13)C8—C9—H9108.8
C2—C1—H1A109.2C10—C9—H9108.8
C10—C1—H1A109.2C1—C10—C13109.04 (14)
C2—C1—H1B109.2C1—C10—C5108.73 (11)
C10—C1—H1B109.2C13—C10—C5112.98 (13)
H1A—C1—H1B107.9C1—C10—C9107.23 (13)
C3—C2—C1109.55 (13)C13—C10—C9111.77 (12)
C3—C2—H2A109.8C5—C10—C9106.90 (12)
C1—C2—H2A109.8C12—C11—C9103.26 (17)
C3—C2—H2B109.8C12—C11—H11A111.1
C1—C2—H2B109.8C9—C11—H11A111.1
H2A—C2—H2B108.2C12—C11—H11B111.1
O3—C3—C2108.86 (13)C9—C11—H11B111.1
O3—C3—C4106.99 (12)H11A—C11—H11B109.1
C2—C3—C4114.73 (13)O2—C12—O1120.5 (2)
O3—C3—H3108.7O2—C12—C11129.2 (3)
C2—C3—H3108.7O1—C12—C11110.28 (15)
C4—C3—H3108.7C10—C13—H13A109.5
C17—C4—C18108.03 (14)C10—C13—H13B109.5
C17—C4—C3111.00 (13)H13A—C13—H13B109.5
C18—C4—C3107.13 (13)C10—C13—H13C109.5
C17—C4—C5114.41 (13)H13A—C13—H13C109.5
C18—C4—C5107.97 (12)H13B—C13—H13C109.5
C3—C4—C5108.02 (12)C8—C14—H14A109.5
C6—C5—C10109.50 (12)C8—C14—H14B109.5
C6—C5—C4112.88 (12)H14A—C14—H14B109.5
C10—C5—C4117.40 (12)C8—C14—H14C109.5
C6—C5—H5105.3H14A—C14—H14C109.5
C10—C5—H5105.3H14B—C14—H14C109.5
C4—C5—H5105.3O4—C15—O3123.78 (16)
C7—C6—C5110.17 (14)O4—C15—C16125.24 (18)
C7—C6—H6A109.6O3—C15—C16110.98 (17)
C5—C6—H6A109.6C15—C16—H16A109.5
C7—C6—H6B109.6C15—C16—H16B109.5
C5—C6—H6B109.6H16A—C16—H16B109.5
H6A—C6—H6B108.1C15—C16—H16C109.5
C8—C7—C6115.88 (15)H16A—C16—H16C109.5
C8—C7—H7A108.3H16B—C16—H16C109.5
C6—C7—H7A108.3C4—C17—H17A109.5
C8—C7—H7B108.3C4—C17—H17B109.5
C6—C7—H7B108.3H17A—C17—H17B109.5
H7A—C7—H7B107.4C4—C17—H17C109.5
O1—C8—C7109.08 (16)H17A—C17—H17C109.5
O1—C8—C14106.37 (14)H17B—C17—H17C109.5
C7—C8—C14109.27 (17)C4—C18—H18A109.5
O1—C8—C9102.92 (14)C4—C18—H18B109.5
C7—C8—C9116.62 (13)H18A—C18—H18B109.5
C14—C8—C9111.92 (17)C4—C18—H18C109.5
C11—C9—C8100.65 (14)H18A—C18—H18C109.5
C11—C9—C10113.45 (15)H18B—C18—H18C109.5
C10—C1—C2—C3−60.61 (18)C14—C8—C9—C11−77.70 (18)
C15—O3—C3—C277.96 (18)O1—C8—C9—C10−86.75 (15)
C15—O3—C3—C4−157.52 (14)C7—C8—C9—C1032.6 (2)
C1—C2—C3—O3178.97 (13)C14—C8—C9—C10159.43 (15)
C1—C2—C3—C459.15 (18)C2—C1—C10—C13−68.69 (16)
O3—C3—C4—C17−45.26 (17)C2—C1—C10—C554.89 (17)
C2—C3—C4—C1775.59 (16)C2—C1—C10—C9170.13 (13)
O3—C3—C4—C1872.47 (15)C6—C5—C10—C1−179.85 (13)
C2—C3—C4—C18−166.68 (13)C4—C5—C10—C1−49.46 (17)
O3—C3—C4—C5−171.45 (11)C6—C5—C10—C13−58.66 (16)
C2—C3—C4—C5−50.60 (17)C4—C5—C10—C1371.73 (17)
C17—C4—C5—C651.22 (18)C6—C5—C10—C964.69 (15)
C18—C4—C5—C6−69.07 (17)C4—C5—C10—C9−164.91 (13)
C3—C4—C5—C6175.39 (13)C11—C9—C10—C179.44 (17)
C17—C4—C5—C10−77.59 (18)C8—C9—C10—C1−164.68 (14)
C18—C4—C5—C10162.11 (14)C11—C9—C10—C13−40.0 (2)
C3—C4—C5—C1046.57 (17)C8—C9—C10—C1375.88 (18)
C10—C5—C6—C7−65.31 (17)C11—C9—C10—C5−164.10 (15)
C4—C5—C6—C7161.90 (13)C8—C9—C10—C5−48.22 (17)
C5—C6—C7—C847.1 (2)C8—C9—C11—C12−31.47 (18)
C12—O1—C8—C7−152.81 (14)C10—C9—C11—C1293.22 (18)
C12—O1—C8—C1489.45 (19)C8—O1—C12—O2−172.27 (18)
C12—O1—C8—C9−28.36 (17)C8—O1—C12—C117.91 (19)
C6—C7—C8—O184.82 (18)C9—C11—C12—O2−163.8 (2)
C6—C7—C8—C14−159.28 (17)C9—C11—C12—O116.0 (2)
C6—C7—C8—C9−31.1 (2)C3—O3—C15—O49.9 (3)
O1—C8—C9—C1136.12 (16)C3—O3—C15—C16−170.25 (14)
C7—C8—C9—C11155.46 (16)
D—H···AD—HH···AD···AD—H···A
C16—H16B···O2i0.982.553.383 (3)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C16—H16B⋯O2i0.982.553.383 (3)143

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Chiral decalins: preparation from oleanolic acid and application in the synthesis of (-)-9-epi-ambrox.

Authors:  Hai-Jun Yang; Bo-Gang Li; Xiao-Hua Cai; Hua-Yi Qi; Ying-Gang Luo; Guo-Lin Zhang
Journal:  J Nat Prod       Date:  2006-11       Impact factor: 4.050

3.  Enantiospecific synthesis of the antituberculosis marine sponge metabolite (+)-puupehenone. The arenol oxidative activation route.

Authors:  Stéphane Quideau; Marjolaine Lebon; Anne-Marie Lamidey
Journal:  Org Lett       Date:  2002-10-31       Impact factor: 6.005

  3 in total
  1 in total

1.  Crystal structure of 3a,6,6,9a-tetra-methyl-dodeca-hydro-naphtho-[2,1-b]furan-2-ol.

Authors:  Xin-Wei Shi; Sheng-Kun Li; Dang-Dang Li; Qiang-Qiang Lu
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-09-12
  1 in total

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