Literature DB >> 21201701

2-{3-Cyano-5,5-dimethyl-4-[4-(pyrrol-idin-1-yl)buta-1,3-dien-yl]-2,5-dihydro-furan-2-yl-idene}malononitrile dichloro-methane solvate.

Graeme J Gainsford, M Delower H Bhuiyan, Andrew J Kay, Ward T Robinson.   

Abstract

The structure of the title compound, C(18)H(18)N(4)O·CH(2)Cl(2), was solved using data collected from a multiple crystal (note high R factors). The crystal structure is dominated by two bifurcated attractive C-H⋯N(cyano) inter-actions.

Entities:  

Year:  2008        PMID: 21201701      PMCID: PMC2960537          DOI: 10.1107/S1600536808024719

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see Kay et al. (2004 ▶). For background, see Gainsford et al. (2007 ▶, 2008a ▶,b ▶,c ▶).

Experimental

Crystal data

C18H18N4O·CH2Cl2 M = 391.29 Monoclinic, a = 6.8755 (8) Å b = 16.8913 (17) Å c = 16.6677 (18) Å β = 93.482 (8)° V = 1932.1 (4) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 120 (2) K 0.30 × 0.15 × 0.13 mm

Data collection

Bruker–Nonius APEXII CCD area-detector diffractometer Absorption correction: multi-scan (Blessing, 1995 ▶) T min = 0.570, T max = 0.955 4280 measured reflections 4280 independent reflections 2517 reflections with I > 2σ(I) R int = 0.099

Refinement

R[F 2 > 2σ(F 2)] = 0.095 wR(F 2) = 0.270 S = 0.99 4280 reflections 237 parameters H-atom parameters constrained Δρmax = 1.36 e Å−3 Δρmin = −0.47 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: RLATT (Bruker, 2004 ▶), SAINT (Bruker, 2005 ▶) and SADABS (Sheldrick, 2003 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97 and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808024719/lh2664sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808024719/lh2664Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H18N4O·CH2Cl2F000 = 816
Mr = 391.29Dx = 1.345 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5595 reflections
a = 6.8755 (8) Åθ = 2.4–29.2º
b = 16.8913 (17) ŵ = 0.35 mm1
c = 16.6677 (18) ÅT = 120 (2) K
β = 93.482 (8)ºBlock, red
V = 1932.1 (4) Å30.30 × 0.15 × 0.13 mm
Z = 4
Bruker–Nonius APEXII CCD area-detector diffractometer4280 independent reflections
Radiation source: fine-focus sealed tube2517 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.099
Detector resolution: 8.192 pixels mm-1θmax = 29.0º
T = 120(2) Kθmin = 2.7º
φ and ω scansh = −9→9
Absorption correction: multi-scan(Blessing, 1995)k = 0→23
Tmin = 0.570, Tmax = 0.955l = 0→22
4280 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.095H-atom parameters constrained
wR(F2) = 0.270  w = 1/[σ2(Fo2) + (0.1824P)2] where P = (Fo2 + 2Fc2)/3
S = 0.99(Δ/σ)max < 0.001
4280 reflectionsΔρmax = 1.36 e Å3
237 parametersΔρmin = −0.47 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. There were 36108 reflections measured in the data collection (43242 of which 7061 were rejected to 2theta 58 degrees & 73 were systematic absence violations)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Four low theta angle reflections affected by the backstop were omitted.Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.2744 (2)0.45770 (7)0.31788 (7)0.0405 (4)
Cl20.2711 (3)0.62862 (7)0.30173 (9)0.0578 (5)
O10.7615 (4)0.90197 (14)0.42000 (15)0.0176 (6)
N10.7450 (8)1.0058 (2)0.6850 (2)0.0461 (13)
N20.7371 (6)1.1047 (2)0.4400 (2)0.0308 (9)
N30.8028 (7)0.8020 (2)0.6872 (2)0.0382 (10)
N40.7736 (5)0.41968 (17)0.40006 (18)0.0175 (7)
C10.7496 (7)0.9959 (2)0.6163 (3)0.0250 (9)
C20.7542 (6)0.9836 (2)0.5329 (2)0.0187 (8)
C30.7462 (6)1.0505 (2)0.4810 (2)0.0218 (8)
C40.7730 (5)0.7750 (2)0.4757 (2)0.0149 (7)
C50.7705 (6)0.8175 (2)0.3964 (2)0.0160 (7)
C60.7637 (5)0.9082 (2)0.5002 (2)0.0148 (7)
C70.7736 (6)0.8325 (2)0.5364 (2)0.0156 (7)
C80.9567 (6)0.8083 (2)0.3533 (2)0.0234 (8)
H8A0.96040.84820.31070.035*
H8B0.96110.75530.32950.035*
H8C1.06910.81540.39160.035*
C90.5876 (7)0.8032 (2)0.3437 (2)0.0248 (9)
H9A0.47330.81020.37540.037*
H9B0.58910.74920.32240.037*
H9C0.58150.84100.29900.037*
C100.7885 (6)0.8171 (2)0.6203 (2)0.0226 (8)
C110.7752 (6)0.6928 (2)0.4885 (2)0.0186 (8)
H110.77240.67560.54270.022*
C120.7811 (6)0.6338 (2)0.4301 (2)0.0194 (8)
H120.78960.64920.37560.023*
C130.7752 (6)0.5539 (2)0.4481 (2)0.0189 (8)
H130.76440.53770.50220.023*
C140.7848 (6)0.4965 (2)0.3880 (2)0.0174 (7)
H140.80060.51430.33470.021*
C150.7243 (6)0.3835 (2)0.4769 (2)0.0187 (8)
H15A0.59820.40370.49400.022*
H15B0.82680.39440.51980.022*
C160.7121 (6)0.2948 (2)0.4578 (2)0.0179 (8)
H16A0.83810.26820.47160.021*
H16B0.60910.26900.48740.021*
C170.6631 (7)0.2927 (2)0.3685 (3)0.0273 (10)
H17A0.52220.30170.35620.033*
H17B0.70030.24130.34540.033*
C180.7825 (7)0.3595 (2)0.3367 (2)0.0243 (9)
H18A0.91840.34260.32980.029*
H18B0.72450.37930.28470.029*
C190.2652 (9)0.5381 (3)0.2501 (3)0.0406 (12)
H19A0.37740.53520.21570.049*
H19B0.14420.53490.21490.049*
U11U22U33U12U13U23
Cl10.0591 (9)0.0256 (6)0.0371 (7)0.0013 (5)0.0050 (5)0.0016 (5)
Cl20.1031 (14)0.0237 (6)0.0465 (8)−0.0009 (7)0.0047 (8)0.0022 (5)
O10.0335 (16)0.0064 (11)0.0131 (12)0.0004 (10)0.0044 (10)0.0004 (9)
N10.091 (4)0.024 (2)0.023 (2)−0.006 (2)0.009 (2)−0.0102 (16)
N20.047 (2)0.0151 (16)0.030 (2)−0.0001 (16)0.0008 (16)0.0014 (15)
N30.063 (3)0.028 (2)0.023 (2)−0.005 (2)−0.0010 (18)0.0067 (16)
N40.0282 (18)0.0089 (14)0.0157 (15)−0.0017 (12)0.0042 (12)0.0002 (11)
C10.041 (3)0.0099 (17)0.024 (2)−0.0014 (16)0.0028 (18)−0.0020 (14)
C20.028 (2)0.0070 (15)0.0210 (19)−0.0003 (14)0.0015 (15)−0.0024 (13)
C30.030 (2)0.0104 (17)0.025 (2)−0.0013 (14)0.0018 (16)−0.0033 (14)
C40.0151 (18)0.0083 (15)0.0213 (18)−0.0007 (12)0.0004 (13)−0.0016 (13)
C50.024 (2)0.0063 (15)0.0175 (17)−0.0030 (13)0.0010 (14)−0.0038 (12)
C60.0200 (18)0.0115 (16)0.0129 (16)0.0021 (13)−0.0007 (12)−0.0012 (12)
C70.0216 (19)0.0112 (15)0.0141 (16)−0.0020 (13)0.0009 (13)0.0010 (13)
C80.033 (2)0.0152 (17)0.0230 (19)−0.0004 (16)0.0060 (16)0.0006 (15)
C90.042 (3)0.0128 (17)0.0189 (19)−0.0034 (16)−0.0066 (16)−0.0003 (14)
C100.031 (2)0.0120 (17)0.024 (2)−0.0043 (15)−0.0023 (16)−0.0018 (14)
C110.023 (2)0.0105 (16)0.0226 (18)−0.0010 (14)0.0026 (14)0.0036 (14)
C120.024 (2)0.0100 (16)0.0238 (19)−0.0005 (14)0.0004 (15)−0.0002 (14)
C130.028 (2)0.0072 (15)0.0219 (19)−0.0015 (13)0.0034 (15)−0.0007 (13)
C140.0207 (19)0.0081 (16)0.0233 (19)0.0021 (13)0.0020 (14)0.0019 (13)
C150.026 (2)0.0129 (17)0.0173 (18)−0.0016 (14)0.0023 (14)0.0008 (13)
C160.0220 (19)0.0093 (16)0.0221 (18)0.0018 (13)−0.0011 (14)0.0022 (13)
C170.040 (3)0.0142 (18)0.027 (2)−0.0056 (17)−0.0036 (18)−0.0025 (15)
C180.045 (3)0.0084 (16)0.0198 (19)0.0029 (16)0.0033 (16)−0.0041 (14)
C190.064 (4)0.036 (3)0.022 (2)−0.001 (2)0.003 (2)0.0043 (18)
Cl1—C191.766 (5)C9—H9A0.9800
Cl2—C191.753 (5)C9—H9B0.9800
O1—C61.341 (4)C9—H9C0.9800
O1—C51.482 (4)C11—C121.397 (5)
N1—C11.160 (6)C11—H110.9500
N2—C31.141 (5)C12—C131.384 (5)
N3—C101.142 (5)C12—H120.9500
N4—C141.317 (4)C13—C141.397 (5)
N4—C181.471 (5)C13—H130.9500
N4—C151.477 (5)C14—H140.9500
C1—C21.408 (5)C15—C161.533 (5)
C2—C61.388 (5)C15—H15A0.9900
C2—C31.423 (5)C15—H15B0.9900
C4—C71.402 (5)C16—C171.505 (5)
C4—C111.405 (5)C16—H16A0.9900
C4—C51.503 (5)C16—H16B0.9900
C5—C91.510 (5)C17—C181.510 (6)
C5—C81.514 (6)C17—H17A0.9900
C6—C71.412 (5)C17—H17B0.9900
C7—C101.421 (5)C18—H18A0.9900
C8—H8A0.9800C18—H18B0.9900
C8—H8B0.9800C19—H19A0.9900
C8—H8C0.9800C19—H19B0.9900
C6—O1—C5110.0 (3)C13—C12—C11122.9 (4)
C14—N4—C18124.5 (3)C13—C12—H12118.6
C14—N4—C15124.0 (3)C11—C12—H12118.6
C18—N4—C15111.0 (3)C12—C13—C14121.2 (4)
N1—C1—C2179.6 (5)C12—C13—H13119.4
C6—C2—C1121.8 (3)C14—C13—H13119.4
C6—C2—C3119.5 (3)N4—C14—C13124.7 (4)
C1—C2—C3118.7 (3)N4—C14—H14117.7
N2—C3—C2178.8 (5)C13—C14—H14117.7
C7—C4—C11125.2 (3)N4—C15—C16103.7 (3)
C7—C4—C5107.6 (3)N4—C15—H15A111.0
C11—C4—C5127.2 (3)C16—C15—H15A111.0
O1—C5—C4103.0 (3)N4—C15—H15B111.0
O1—C5—C9105.2 (3)C16—C15—H15B111.0
C4—C5—C9113.6 (3)H15A—C15—H15B109.0
O1—C5—C8106.0 (3)C17—C16—C15103.6 (3)
C4—C5—C8113.8 (3)C17—C16—H16A111.0
C9—C5—C8113.9 (3)C15—C16—H16A111.0
O1—C6—C2117.7 (3)C17—C16—H16B111.0
O1—C6—C7110.6 (3)C15—C16—H16B111.0
C2—C6—C7131.7 (3)H16A—C16—H16B109.0
C4—C7—C6108.7 (3)C16—C17—C18103.7 (3)
C4—C7—C10125.4 (3)C16—C17—H17A111.0
C6—C7—C10125.8 (3)C18—C17—H17A111.0
C5—C8—H8A109.5C16—C17—H17B111.0
C5—C8—H8B109.5C18—C17—H17B111.0
H8A—C8—H8B109.5H17A—C17—H17B109.0
C5—C8—H8C109.5N4—C18—C17102.5 (3)
H8A—C8—H8C109.5N4—C18—H18A111.3
H8B—C8—H8C109.5C17—C18—H18A111.3
C5—C9—H9A109.5N4—C18—H18B111.3
C5—C9—H9B109.5C17—C18—H18B111.3
H9A—C9—H9B109.5H18A—C18—H18B109.2
C5—C9—H9C109.5Cl2—C19—Cl1111.0 (3)
H9A—C9—H9C109.5Cl2—C19—H19A109.4
H9B—C9—H9C109.5Cl1—C19—H19A109.4
N3—C10—C7177.6 (4)Cl2—C19—H19B109.4
C12—C11—C4126.9 (4)Cl1—C19—H19B109.4
C12—C11—H11116.6H19A—C19—H19B108.0
C4—C11—H11116.6
C6—O1—C5—C41.4 (4)O1—C6—C7—C4−1.5 (4)
C6—O1—C5—C9120.7 (3)C2—C6—C7—C4177.8 (4)
C6—O1—C5—C8−118.4 (3)O1—C6—C7—C10176.5 (4)
C7—C4—C5—O1−2.3 (4)C2—C6—C7—C10−4.2 (7)
C11—C4—C5—O1178.0 (4)C7—C4—C11—C12−177.7 (4)
C7—C4—C5—C9−115.5 (3)C5—C4—C11—C122.0 (6)
C11—C4—C5—C964.8 (5)C4—C11—C12—C13−177.4 (4)
C7—C4—C5—C8112.0 (3)C11—C12—C13—C14−178.9 (4)
C11—C4—C5—C8−67.8 (5)C18—N4—C14—C13179.6 (4)
C5—O1—C6—C2−179.4 (3)C15—N4—C14—C138.1 (6)
C5—O1—C6—C70.0 (4)C12—C13—C14—N4−177.6 (4)
C1—C2—C6—O1178.0 (4)C14—N4—C15—C16175.1 (4)
C3—C2—C6—O1−1.1 (6)C18—N4—C15—C162.5 (4)
C1—C2—C6—C7−1.2 (7)N4—C15—C16—C17−25.4 (4)
C3—C2—C6—C7179.7 (4)C15—C16—C17—C1838.8 (4)
C11—C4—C7—C6−177.9 (4)C14—N4—C18—C17−151.3 (4)
C5—C4—C7—C62.3 (4)C15—N4—C18—C1721.1 (4)
C11—C4—C7—C104.1 (6)C16—C17—C18—N4−36.7 (4)
C5—C4—C7—C10−175.7 (4)
D—H···AD—HH···AD···AD—H···A
C14—H14···N1i0.952.523.378 (5)150
C18—H18B···N1i0.992.563.400 (5)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C14—H14⋯N1i0.952.523.378 (5)150
C18—H18B⋯N1i0.992.563.400 (5)142

Symmetry code: (i) .

  5 in total

1.  Geometry and bond-length alternation in nonlinear optical materials. I. Standard parameters in two precursors.

Authors:  Graeme J Gainsford; M Delower H Bhuiyan; Andrew J Kay
Journal:  Acta Crystallogr C       Date:  2007-10-13       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

4.  2-{3-Cyano-5,5-dimethyl-4-[4-(piperidin-1-yl)buta-1,3-dien-yl]-2,5-dihydro-furan-2-yl-idene}malononitrile.

Authors:  Graeme J Gainsford; M Delower H Bhuiyan; Andrew J Kay; Anthony L Spek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-23

5.  Geometry and bond-length alternation in nonlinear optical materials. II. Effects of donor strength in two push-pull molecules.

Authors:  Graeme J Gainsford; M Delower H Bhuiyan; Andrew J Kay
Journal:  Acta Crystallogr C       Date:  2008-03-08       Impact factor: 1.172

  5 in total
  1 in total

1.  2-{3-Cyano-5,5-dimethyl-4-[6-(pyrrol-i-din-1-yl)hexa-1,3,5-trien-yl]-2,5-dihydro-2-furylidene}malononitrile.

Authors:  Graeme J Gainsford; M Delower H Bhuiyan; Andrew J Kay
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.