| Literature DB >> 21201624 |
Hoong-Kun Fun, Reza Kia, Valiollah Mirkhani, Hasan Zargoshi.
Abstract
In the title complex, [Ni(C(20)H(14)N(2)O(4))]·2H(2)O, the Ni(II) ion is in an essentially square-planar geometry involving an N(2)O(2) atom set of the tetra-dentate Schiff base ligand. The Ni atom lies on a crystallographic twofold rotation axis. The asymmetric unit contains one half-mol-ecule of the complex and a water mol-ecule. An inter-molecular O-H⋯O hydrogen bond forms a four-membered ring, producing an R(1) (2)(4) ring motif involving a bifurcated hydrogen bond to the phenolate O atoms of the complex mol-ecule. In the crystal structure, mol-ecules are linked by π-π stacking inter-actions, with centroid-centroid distances in the range 3.5750 (11)-3.7750 (11) Å. As a result of the twofold symmetry, the central benzene ring makes the same dihedral angle of 15.75 (9)° with the two outer benzene rings. The dihedral angle between the two hydroxy-phenyl rings is 13.16 (5)°. In the crystal structure, mol-ecules are linked into infinite one-dimensional chains by directed four-membered O-H⋯O-H inter-actions along the c axis and are further connected by C-H⋯O and π-π stacking into a three-dimensional network. An inter-esting feature of the crystal structure is the short Ni⋯O, O⋯O and N⋯N inter-actions which are shorter than the sum of the van der Waals radii of the relevant atoms. The crystal structure is stabilized by inter-molecular O-H⋯O and C-H⋯O hydrogen bonds and by π-π stacking inter-actions.Entities:
Year: 2008 PMID: 21201624 PMCID: PMC2960688 DOI: 10.1107/S1600536808026093
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C20H14N2O4)]·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3113 reflections |
| θ = 2.3–29.1º | |
| µ = 1.18 mm−1 | |
| β = 101.150 (1)º | Block, red |
| 0.35 × 0.12 × 0.11 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 3566 independent reflections |
| Radiation source: fine-focus sealed tube | 2388 reflections with |
| Monochromator: graphite | |
| θmax = 34.3º | |
| φ and ω scans | θmin = 2.2º |
| Absorption correction: multi-scan( | |
| 14574 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 3566 reflections | Δρmax = 0.61 e Å−3 |
| 136 parameters | Δρmin = −0.73 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Experimental. The low-temperature data was collected with the Oxford Cryosystem Cobra low-temperature attachment |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Ni1 | 0.0000 | 0.246535 (17) | 0.7500 | 0.01493 (11) | |
| O1 | 0.04391 (12) | 0.32501 (7) | 0.88434 (14) | 0.0174 (3) | |
| O2 | 0.18665 (13) | 0.44913 (8) | 1.35074 (15) | 0.0215 (3) | |
| N1 | 0.06039 (14) | 0.17016 (8) | 0.88409 (17) | 0.0152 (3) | |
| C1 | 0.09715 (16) | 0.32009 (10) | 1.0287 (2) | 0.0159 (4) | |
| C2 | 0.11546 (17) | 0.38691 (10) | 1.1132 (2) | 0.0175 (4) | |
| H2A | 0.0908 | 0.4329 | 1.0668 | 0.021* | |
| C3 | 0.16965 (17) | 0.38546 (10) | 1.2647 (2) | 0.0161 (4) | |
| C4 | 0.21006 (17) | 0.31684 (11) | 1.3364 (2) | 0.0200 (4) | |
| H4A | 0.2474 | 0.3160 | 1.4380 | 0.024* | |
| C5 | 0.1937 (2) | 0.25113 (10) | 1.2545 (2) | 0.0192 (4) | |
| H5A | 0.2218 | 0.2058 | 1.3015 | 0.023* | |
| C6 | 0.13518 (18) | 0.25029 (10) | 1.1002 (2) | 0.0160 (3) | |
| C7 | 0.11768 (17) | 0.17979 (10) | 1.0251 (2) | 0.0172 (4) | |
| H7A | 0.1490 | 0.1369 | 1.0793 | 0.021* | |
| C8 | 0.03852 (17) | 0.09645 (10) | 0.8211 (2) | 0.0181 (4) | |
| C9 | 0.08370 (18) | 0.02822 (10) | 0.8878 (2) | 0.0206 (4) | |
| H9A | 0.1404 | 0.0281 | 0.9790 | 0.025* | |
| C10 | 0.04344 (18) | −0.03919 (11) | 0.8171 (2) | 0.0232 (4) | |
| H10A | 0.0748 | −0.0849 | 0.8598 | 0.028* | |
| O1W | 0.15531 (13) | 0.42836 (7) | 0.67062 (15) | 0.0240 (3) | |
| H1W1 | 0.0971 | 0.3950 | 0.6774 | 0.036* | |
| H2W1 | 0.1630 | 0.4380 | 0.5829 | 0.036* | |
| H1O2 | 0.170 (2) | 0.4836 (15) | 1.304 (3) | 0.047 (9)* |
| Ni1 | 0.01935 (18) | 0.01096 (18) | 0.01281 (16) | 0.000 | −0.00102 (12) | 0.000 |
| O1 | 0.0240 (7) | 0.0128 (6) | 0.0126 (6) | 0.0004 (5) | −0.0033 (5) | −0.0004 (5) |
| O2 | 0.0320 (8) | 0.0146 (7) | 0.0156 (6) | −0.0001 (6) | −0.0007 (6) | −0.0040 (6) |
| N1 | 0.0177 (7) | 0.0109 (7) | 0.0161 (7) | −0.0006 (6) | 0.0012 (6) | −0.0003 (6) |
| C1 | 0.0189 (8) | 0.0149 (9) | 0.0129 (8) | 0.0002 (7) | 0.0002 (7) | 0.0020 (7) |
| C2 | 0.0201 (9) | 0.0156 (9) | 0.0148 (8) | −0.0007 (7) | −0.0012 (7) | 0.0009 (7) |
| C3 | 0.0192 (9) | 0.0142 (9) | 0.0145 (8) | −0.0009 (7) | 0.0020 (7) | −0.0020 (7) |
| C4 | 0.0260 (10) | 0.0209 (10) | 0.0111 (8) | 0.0015 (8) | −0.0011 (7) | 0.0013 (7) |
| C5 | 0.0256 (10) | 0.0168 (9) | 0.0139 (8) | 0.0010 (7) | 0.0006 (7) | 0.0047 (7) |
| C6 | 0.0189 (8) | 0.0154 (9) | 0.0126 (7) | −0.0004 (7) | 0.0004 (6) | 0.0010 (7) |
| C7 | 0.0215 (9) | 0.0132 (9) | 0.0158 (8) | 0.0007 (7) | 0.0009 (7) | 0.0040 (7) |
| C8 | 0.0192 (9) | 0.0151 (9) | 0.0188 (9) | 0.0006 (7) | 0.0011 (7) | 0.0016 (7) |
| C9 | 0.0224 (9) | 0.0173 (9) | 0.0207 (9) | 0.0005 (8) | 0.0007 (7) | 0.0022 (8) |
| C10 | 0.0293 (11) | 0.0153 (9) | 0.0252 (10) | 0.0014 (8) | 0.0055 (8) | 0.0039 (8) |
| O1W | 0.0312 (8) | 0.0175 (7) | 0.0232 (7) | −0.0055 (6) | 0.0050 (6) | 0.0009 (6) |
| Ni1—O1 | 1.8436 (12) | C4—C5 | 1.369 (3) |
| Ni1—O1i | 1.8436 (12) | C4—H4A | 0.9300 |
| Ni1—N1i | 1.8474 (15) | C5—C6 | 1.417 (3) |
| Ni1—N1 | 1.8474 (15) | C5—H5A | 0.9300 |
| O1—C1 | 1.324 (2) | C6—C7 | 1.414 (2) |
| O2—C3 | 1.359 (2) | C7—H7A | 0.9300 |
| O2—H1O2 | 0.74 (3) | C8—C8i | 1.392 (4) |
| N1—C7 | 1.317 (2) | C8—C9 | 1.394 (2) |
| N1—C8 | 1.422 (2) | C9—C10 | 1.382 (3) |
| C1—C2 | 1.399 (2) | C9—H9A | 0.9300 |
| C1—C6 | 1.416 (2) | C10—C10i | 1.387 (4) |
| C2—C3 | 1.383 (2) | C10—H10A | 0.9300 |
| C2—H2A | 0.9300 | O1W—H1W1 | 0.8771 |
| C3—C4 | 1.404 (3) | O1W—H2W1 | 0.8309 |
| Cg1···Cg4ii | 3.7364 (11) | Cg4···Cg4v | 3.7750 (11) |
| Cg2···Cg2ii | 3.7380 (9) | Ni1···O1Wi | 3.7635 (13) |
| Cg2···Cg3iii | 3.7381 (9) | O1···O1i | 2.4319 (18) |
| Cg3···Cg4iv | 3.5766 (10) | N1···N1i | 2.525 (2) |
| O1—Ni1—O1i | 82.53 (8) | C5—C4—H4A | 120.5 |
| O1—Ni1—N1i | 174.29 (5) | C3—C4—H4A | 120.5 |
| O1i—Ni1—N1i | 95.89 (7) | C4—C5—C6 | 121.82 (17) |
| O1—Ni1—N1 | 95.89 (7) | C4—C5—H5A | 119.1 |
| O1i—Ni1—N1 | 174.29 (6) | C6—C5—H5A | 119.1 |
| N1i—Ni1—N1 | 86.21 (9) | C7—C6—C1 | 123.15 (17) |
| C1—O1—Ni1 | 127.44 (11) | C7—C6—C5 | 118.38 (16) |
| C3—O2—H1O2 | 111 (2) | C1—C6—C5 | 118.47 (16) |
| C7—N1—C8 | 121.12 (15) | N1—C7—C6 | 124.97 (17) |
| C7—N1—Ni1 | 125.63 (13) | N1—C7—H7A | 117.5 |
| C8—N1—Ni1 | 113.24 (12) | C6—C7—H7A | 117.5 |
| O1—C1—C2 | 118.13 (16) | C8i—C8—C9 | 119.92 (11) |
| O1—C1—C6 | 122.74 (16) | C8i—C8—N1 | 113.20 (9) |
| C2—C1—C6 | 119.12 (17) | C9—C8—N1 | 126.87 (17) |
| C3—C2—C1 | 120.89 (17) | C10—C9—C8 | 119.37 (18) |
| C3—C2—H2A | 119.6 | C10—C9—H9A | 120.3 |
| C1—C2—H2A | 119.6 | C8—C9—H9A | 120.3 |
| O2—C3—C2 | 122.42 (17) | C9—C10—C10i | 120.43 (11) |
| O2—C3—C4 | 117.00 (16) | C9—C10—H10A | 119.8 |
| C2—C3—C4 | 120.59 (17) | C10i—C10—H10A | 119.8 |
| C5—C4—C3 | 119.06 (17) | H1W1—O1W—H2W1 | 114.3 |
| O1i—Ni1—O1—C1 | −176.47 (18) | O1—C1—C6—C5 | 178.70 (17) |
| N1i—Ni1—N1—C7 | −176.59 (19) | C2—C1—C6—C5 | −1.7 (3) |
| O1—Ni1—N1—C8 | 177.60 (12) | C4—C5—C6—C7 | −177.71 (18) |
| N1i—Ni1—N1—C8 | 2.93 (9) | C4—C5—C6—C1 | 2.4 (3) |
| Ni1—O1—C1—C2 | −176.01 (12) | C8—N1—C7—C6 | −175.09 (17) |
| Ni1—O1—C1—C6 | 3.6 (3) | Ni1—N1—C7—C6 | 4.4 (3) |
| O1—C1—C2—C3 | 179.49 (17) | C1—C6—C7—N1 | −3.0 (3) |
| C6—C1—C2—C3 | −0.1 (3) | C5—C6—C7—N1 | 177.10 (18) |
| C1—C2—C3—O2 | −178.73 (16) | C7—N1—C8—C8i | 171.2 (2) |
| C1—C2—C3—C4 | 1.4 (3) | Ni1—N1—C8—C8i | −8.3 (3) |
| O2—C3—C4—C5 | 179.35 (17) | C7—N1—C8—C9 | −7.6 (3) |
| C2—C3—C4—C5 | −0.8 (3) | Ni1—N1—C8—C9 | 172.86 (16) |
| C3—C4—C5—C6 | −1.1 (3) | C8i—C8—C9—C10 | −5.1 (3) |
| O1—C1—C6—C7 | −1.2 (3) | N1—C8—C9—C10 | 173.65 (18) |
| C2—C1—C6—C7 | 178.37 (17) | C8—C9—C10—C10i | −1.6 (3) |
| H··· | ||||
| O1W—H1W1···O1 | 0.88 | 2.40 | 3.0733 (18) | 133 |
| O1W—H1W1···O1i | 0.88 | 1.97 | 2.8072 (19) | 160 |
| O1W—H2W1···O2vi | 0.83 | 2.17 | 2.9985 (19) | 173 |
| C9—H9A···O2vii | 0.93 | 2.60 | 3.394 (2) | 144 |
Selected interatomic distances (Å)
Cg1, Cg2, Cg3, and Cg4 are the centroids of the Ni1/N1/C8/C8A/N1A, Ni1/O1/C1/C6/C7/N1, Ni1/O1A/C1A/C6A/C7A/N1A and C1–C6 rings, respectively.
| 3.7364 (11) | |
| 3.7380 (9) | |
| 3.7381 (9) | |
| 3.5766 (10) | |
| 3.7750 (11) | |
| Ni1⋯O1 | 3.7635 (13) |
| O1⋯O1v | 2.4319 (18) |
| N1⋯N1v | 2.525 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.88 | 2.40 | 3.0733 (18) | 133 |
| O1 | 0.88 | 1.97 | 2.8072 (19) | 160 |
| O1 | 0.83 | 2.17 | 2.9985 (19) | 173 |
| C9—H9 | 0.93 | 2.60 | 3.394 (2) | 144 |
Symmetry codes: (v) ; (vi) ; (vii) .