| Literature DB >> 29850091 |
Nadir Ghichi1, Ali Benboudiaf1, Yacine DJebli2, Chawki Bensouici3, Hocine Merazig1.
Abstract
The whole mol-ecule of the title Schiff base compound, C34H28N2O4, is generated by mirror symmetry, with the mirror bis-ecting the central benzene ring. It was synthesized via the condensation reaction of 1,2-di-amine-benzene with 4-benz-yloxy-2-hy-droxy-benzaldehyde. The mol-ecule is V-shaped and there are two intra-molecular O-H⋯N hydrogen bonds present forming S(6) ring motifs. The configuration about the C=N imine bonds is E. The central benzene ring makes dihedral angles of 41.9 (2) and 43.6 (2)° with the phenol ring and the outer benz-yloxy ring, respectively. The latter two rings are inclined to each other by 84.4 (2)°. In the crystal, mol-ecules are linked by C-H⋯π inter-actions, forming layers lying parallel to the ab plane. The Hirshfeld surface analysis and the two-dimensional fingerprint plots confirm the predominance of these inter-actions in the crystal structure. The anti-oxidant capacity of the compound was determined by the cupric reducing anti-oxidant capacity (CUPRAC) process.Entities:
Keywords: CUPRAC; C—H⋯π interactions; Hirshfeld surface analysis; Schiff base; antioxidant capacity; crystal structure; hydrogen bonding
Year: 2018 PMID: 29850091 PMCID: PMC5947487 DOI: 10.1107/S2056989018005832
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1View of the molecular structure of compound (I), with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. Unlabelled atoms are related to labelled atoms by the mirror symmetry code: (i) −x, y, z. The intramolecular O—H⋯N hydrogen bonds (see Table 1 ▸) are shown as dashed lines.
Hydrogen-bond geometry (Å, °)
Cg2 is the centroid of the C5–C10 phenol ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.82 | 1.90 | 2.622 (5) | 147 |
| C2—H2⋯ | 0.93 | 2.88 | 3.499 (5) | 125 |
| C13—H13⋯ | 0.93 | 2.60 | 3.493 (5) | 161 |
Symmetry codes: (i) ; (ii) .
Figure 2Crystal packing of compound (I) viewed along the c axis, with the O—H⋯N intramolecular hydrogen bonds and the C—H⋯π interactions (see Table 1 ▸) illustrated as dashed lines.
Figure 3View of the Hirshfeld surface of (I) mapped over d norm.
Figure 4The two-dimensional fingerprint plots of (I): (a) all interactions; (b) H⋯H; (c) H⋯C/C⋯H; (d) H⋯O/O⋯H.
Figure 5Similar compounds to that of the title compound, (I), in the CSD; see Section 4, Database survey.
Figure 6Reduction of the chromogenic complex of Cu+2–Nc
Cupric ion reducing antioxidant capacity of compound (I)
| Percentage (%) Inhibition | ||||||||
|---|---|---|---|---|---|---|---|---|
| 12.5 µg | 25 µg | 50 µg | 100 µg | 200 µg | 400 µg | 800 µg | A0.50 (μg ml−1) | |
| Compound (I) | 0.39±0.01 | 0.59±0.01 | 0.91±0.03 | 1.42±0.02 | 1.84±0.36 | 3.12±0.25 | 4.29±0.11 | 15.03±1.50 |
| BHT | 1.41±0.03 | 2.22±0.05 | 2.42±0.02 | 2.50±0.01 | 2.56±0.05 | 2.86±0.07 | 3.38±0.13 | 8.97±3.94 |
Experimental details
| Crystal data | |
| Chemical formula | C34H28N2O4 |
|
| 528.58 |
| Crystal system, space group | Orthorhombic, |
| Temperature (K) | 293 |
|
| 35.297 (3), 9.3902 (6), 8.3603 (5) |
|
| 2771.0 (3) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.08 |
| Crystal size (mm) | 0.03 × 0.02 × 0.01 |
| Data collection | |
| Diffractometer | Bruker APEXII CCD |
| No. of measured, independent and observed [ | 4493, 2516, 1691 |
|
| 0.042 |
| (sin θ/λ)max (Å−1) | 0.651 |
| Refinement | |
|
| 0.053, 0.158, 1.02 |
| No. of reflections | 2516 |
| No. of parameters | 185 |
| No. of restraints | 1 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.29, −0.24 |
Computer programs: APEX2 and SAINT (Bruker, 2011 ▸), SHELXT2017 (Sheldrick, 2015a ▸), SHELXL2017 (Sheldrick, 2015b ▸), SHELXTL (Sheldrick, 2008 ▸), Mercury (Macrae et al.2008 ▸) and PLATON (Spek, 2009 ▸).
| C34H28N2O4 | |
| Orthorhombic, | Mo |
| Hall symbol: C 2c -2 | Cell parameters from 1621 reflections |
| θ = 2.2–21.3° | |
| µ = 0.08 mm−1 | |
| Block, yellow | |
| 0.03 × 0.02 × 0.01 mm |
| Bruker APEXII CCD diffractometer | |
| Detector resolution: 18.4 pixels mm-1 | θmax = 27.5°, θmin = 3.7° |
| φ and ω scans | |
| 4493 measured reflections | |
| 2516 independent reflections | |
| 1691 reflections with |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H-atom parameters constrained | |
| 2516 reflections | (Δ/σ)max < 0.001 |
| 185 parameters | Δρmax = 0.29 e Å−3 |
| 1 restraint | Δρmin = −0.24 e Å−3 |
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
| O1 | 0.05052 (9) | 0.2350 (3) | 0.3234 (5) | 0.0693 (13) | |
| O2 | 0.15676 (8) | 0.0288 (3) | 0.5919 (4) | 0.0546 (9) | |
| N1 | 0.03881 (9) | 0.5084 (4) | 0.3640 (5) | 0.0487 (10) | |
| C1 | 0.01955 (13) | 0.8879 (4) | 0.2654 (7) | 0.0639 (15) | |
| C2 | 0.03890 (12) | 0.7645 (4) | 0.2985 (6) | 0.0567 (14) | |
| C3 | 0.01982 (11) | 0.6379 (4) | 0.3322 (5) | 0.0481 (11) | |
| C4 | 0.06841 (12) | 0.5103 (4) | 0.4519 (6) | 0.0495 (14) | |
| C5 | 0.09057 (11) | 0.3828 (4) | 0.4833 (5) | 0.0454 (11) | |
| C6 | 0.08042 (11) | 0.2506 (4) | 0.4207 (5) | 0.0475 (11) | |
| C7 | 0.10168 (11) | 0.1285 (4) | 0.4566 (5) | 0.0488 (11) | |
| C8 | 0.13349 (11) | 0.1401 (4) | 0.5523 (5) | 0.0463 (12) | |
| C9 | 0.14420 (12) | 0.2710 (4) | 0.6146 (6) | 0.0560 (16) | |
| C10 | 0.12269 (12) | 0.3889 (4) | 0.5813 (5) | 0.0560 (16) | |
| C11 | 0.14781 (12) | −0.1086 (4) | 0.5260 (6) | 0.0547 (16) | |
| C12 | 0.17886 (11) | −0.2104 (4) | 0.5695 (5) | 0.0449 (11) | |
| C13 | 0.17544 (12) | −0.2993 (4) | 0.6998 (6) | 0.0543 (16) | |
| C14 | 0.20330 (16) | −0.3988 (4) | 0.7345 (6) | 0.0677 (17) | |
| C15 | 0.23502 (14) | −0.4070 (5) | 0.6404 (7) | 0.0700 (19) | |
| C16 | 0.23920 (14) | −0.3165 (6) | 0.5124 (7) | 0.0697 (17) | |
| C17 | 0.21118 (13) | −0.2190 (5) | 0.4765 (6) | 0.0617 (17) | |
| H1 | 0.03276 | 0.97121 | 0.24301 | 0.0770* | |
| H1O | 0.04038 | 0.31254 | 0.30933 | 0.1040* | |
| H2 | 0.06524 | 0.76529 | 0.29851 | 0.0680* | |
| H4 | 0.0777 (10) | 0.604 (4) | 0.509 (5) | 0.041 (9)* | |
| H7 | 0.09442 | 0.04030 | 0.41635 | 0.0580* | |
| H9 | 0.16571 | 0.27872 | 0.67824 | 0.0670* | |
| H10 | 0.12968 | 0.47594 | 0.62529 | 0.0670* | |
| H11A | 0.12385 | −0.14214 | 0.56862 | 0.0660* | |
| H11B | 0.14557 | −0.10203 | 0.41061 | 0.0660* | |
| H13 | 0.15420 | −0.29259 | 0.76516 | 0.0650* | |
| H14 | 0.20047 | −0.45974 | 0.82141 | 0.0810* | |
| H15 | 0.25371 | −0.47378 | 0.66311 | 0.0840* | |
| H16 | 0.26095 | −0.32099 | 0.44979 | 0.0840* | |
| H17 | 0.21407 | −0.15860 | 0.38915 | 0.0740* |
| O1 | 0.0640 (19) | 0.0400 (16) | 0.104 (3) | 0.0056 (14) | −0.0359 (19) | −0.0063 (17) |
| O2 | 0.0595 (17) | 0.0386 (14) | 0.0658 (17) | 0.0080 (12) | −0.0166 (15) | −0.0028 (14) |
| N1 | 0.0416 (17) | 0.0335 (16) | 0.071 (2) | 0.0021 (14) | 0.0019 (18) | 0.0024 (15) |
| C1 | 0.063 (3) | 0.0317 (19) | 0.097 (3) | −0.0042 (16) | −0.001 (3) | 0.003 (2) |
| C2 | 0.047 (2) | 0.041 (2) | 0.082 (3) | −0.0048 (17) | −0.002 (2) | 0.000 (2) |
| C3 | 0.049 (2) | 0.0322 (18) | 0.063 (2) | 0.0022 (16) | 0.002 (2) | −0.0028 (17) |
| C4 | 0.049 (2) | 0.0345 (19) | 0.065 (3) | 0.0002 (17) | 0.003 (2) | −0.0024 (18) |
| C5 | 0.042 (2) | 0.0373 (19) | 0.057 (2) | −0.0015 (16) | 0.002 (2) | −0.0033 (18) |
| C6 | 0.042 (2) | 0.0364 (19) | 0.064 (2) | −0.0017 (16) | −0.008 (2) | −0.0015 (17) |
| C7 | 0.051 (2) | 0.0365 (18) | 0.059 (2) | −0.0007 (16) | −0.010 (2) | −0.0041 (19) |
| C8 | 0.047 (2) | 0.039 (2) | 0.053 (2) | 0.0063 (16) | −0.0047 (19) | 0.0005 (17) |
| C9 | 0.058 (3) | 0.045 (2) | 0.065 (3) | −0.0010 (18) | −0.017 (2) | −0.003 (2) |
| C10 | 0.060 (3) | 0.039 (2) | 0.069 (3) | −0.0035 (18) | −0.011 (2) | −0.006 (2) |
| C11 | 0.059 (3) | 0.041 (2) | 0.064 (3) | 0.0043 (19) | −0.013 (2) | −0.0047 (19) |
| C12 | 0.043 (2) | 0.0378 (19) | 0.054 (2) | 0.0001 (16) | −0.0069 (18) | −0.0056 (18) |
| C13 | 0.054 (3) | 0.049 (2) | 0.060 (3) | 0.0042 (18) | −0.004 (2) | −0.001 (2) |
| C14 | 0.082 (3) | 0.051 (3) | 0.070 (3) | 0.013 (2) | −0.021 (3) | 0.005 (2) |
| C15 | 0.060 (3) | 0.055 (3) | 0.095 (4) | 0.020 (2) | −0.023 (3) | −0.028 (3) |
| C16 | 0.053 (3) | 0.075 (3) | 0.081 (3) | 0.006 (2) | 0.001 (3) | −0.021 (3) |
| C17 | 0.062 (3) | 0.057 (3) | 0.066 (3) | −0.005 (2) | −0.002 (2) | −0.001 (2) |
| O1—C6 | 1.341 (5) | C12—C13 | 1.378 (6) |
| O2—C8 | 1.370 (5) | C13—C14 | 1.387 (6) |
| O2—C11 | 1.438 (5) | C14—C15 | 1.371 (8) |
| N1—C3 | 1.414 (5) | C15—C16 | 1.374 (8) |
| N1—C4 | 1.278 (6) | C16—C17 | 1.381 (7) |
| O1—H1O | 0.8200 | C1—H1 | 0.9300 |
| C1—C1i | 1.380 (6) | C2—H2 | 0.9300 |
| C1—C2 | 1.373 (6) | C4—H4 | 1.05 (4) |
| C2—C3 | 1.395 (5) | C7—H7 | 0.9300 |
| C3—C3i | 1.399 (5) | C9—H9 | 0.9300 |
| C4—C5 | 1.454 (5) | C10—H10 | 0.9300 |
| C5—C10 | 1.400 (6) | C11—H11A | 0.9700 |
| C5—C6 | 1.394 (5) | C11—H11B | 0.9700 |
| C6—C7 | 1.403 (5) | C13—H13 | 0.9300 |
| C7—C8 | 1.383 (6) | C14—H14 | 0.9300 |
| C8—C9 | 1.388 (6) | C15—H15 | 0.9300 |
| C9—C10 | 1.371 (6) | C16—H16 | 0.9300 |
| C11—C12 | 1.499 (6) | C17—H17 | 0.9300 |
| C12—C17 | 1.383 (6) | ||
| C8—O2—C11 | 117.4 (3) | C12—C17—C16 | 120.5 (5) |
| C3—N1—C4 | 118.9 (4) | C2—C1—H1 | 120.00 |
| C6—O1—H1O | 109.00 | C1i—C1—H1 | 120.00 |
| C1i—C1—C2 | 119.8 (4) | C1—C2—H2 | 119.00 |
| C1—C2—C3 | 121.3 (4) | C3—C2—H2 | 119.00 |
| N1—C3—C3i | 118.3 (3) | N1—C4—H4 | 122 (2) |
| C2—C3—C3i | 118.9 (4) | C5—C4—H4 | 116 (2) |
| N1—C3—C2 | 122.8 (4) | C6—C7—H7 | 120.00 |
| N1—C4—C5 | 122.2 (4) | C8—C7—H7 | 120.00 |
| C4—C5—C10 | 120.5 (4) | C8—C9—H9 | 120.00 |
| C6—C5—C10 | 117.7 (3) | C10—C9—H9 | 120.00 |
| C4—C5—C6 | 121.8 (4) | C5—C10—H10 | 119.00 |
| O1—C6—C7 | 117.5 (3) | C9—C10—H10 | 119.00 |
| C5—C6—C7 | 120.7 (4) | O2—C11—H11A | 110.00 |
| O1—C6—C5 | 121.8 (3) | O2—C11—H11B | 110.00 |
| C6—C7—C8 | 119.6 (4) | C12—C11—H11A | 110.00 |
| O2—C8—C9 | 115.0 (4) | C12—C11—H11B | 110.00 |
| C7—C8—C9 | 120.5 (4) | H11A—C11—H11B | 108.00 |
| O2—C8—C7 | 124.5 (3) | C12—C13—H13 | 120.00 |
| C8—C9—C10 | 119.2 (4) | C14—C13—H13 | 120.00 |
| C5—C10—C9 | 122.3 (4) | C13—C14—H14 | 120.00 |
| O2—C11—C12 | 108.6 (3) | C15—C14—H14 | 120.00 |
| C11—C12—C13 | 120.9 (4) | C14—C15—H15 | 120.00 |
| C13—C12—C17 | 118.8 (4) | C16—C15—H15 | 120.00 |
| C11—C12—C17 | 120.3 (4) | C15—C16—H16 | 120.00 |
| C12—C13—C14 | 120.8 (4) | C17—C16—H16 | 120.00 |
| C13—C14—C15 | 119.8 (4) | C12—C17—H17 | 120.00 |
| C14—C15—C16 | 120.0 (5) | C16—C17—H17 | 120.00 |
| C15—C16—C17 | 120.2 (5) | ||
| C11—O2—C8—C7 | 1.5 (6) | C4—C5—C10—C9 | 179.6 (4) |
| C11—O2—C8—C9 | −177.8 (4) | C6—C5—C10—C9 | 0.9 (6) |
| C8—O2—C11—C12 | 174.0 (3) | O1—C6—C7—C8 | 177.9 (4) |
| C4—N1—C3—C2 | 41.3 (6) | C5—C6—C7—C8 | −1.4 (6) |
| C4—N1—C3—C3i | −139.8 (4) | C6—C7—C8—O2 | −178.4 (4) |
| C3—N1—C4—C5 | −176.8 (4) | C6—C7—C8—C9 | 0.9 (6) |
| C1i—C1—C2—C3 | 0.1 (8) | O2—C8—C9—C10 | 179.9 (4) |
| C2—C1—C1i—C2i | 0.0 (9) | C7—C8—C9—C10 | 0.5 (7) |
| C1—C2—C3—N1 | 178.9 (5) | C8—C9—C10—C5 | −1.4 (7) |
| C1—C2—C3—C3i | −0.1 (7) | O2—C11—C12—C13 | 96.8 (4) |
| N1—C3—C3i—N1i | 0.0 (6) | O2—C11—C12—C17 | −84.8 (5) |
| N1—C3—C3i—C2i | −179.0 (4) | C11—C12—C13—C14 | 176.4 (4) |
| C2—C3—C3i—N1i | 179.0 (4) | C17—C12—C13—C14 | −2.0 (6) |
| C2—C3—C3i—C2i | 0.0 (6) | C11—C12—C17—C16 | −177.4 (4) |
| N1—C4—C5—C6 | −0.9 (7) | C13—C12—C17—C16 | 1.0 (7) |
| N1—C4—C5—C10 | −179.5 (4) | C12—C13—C14—C15 | 1.4 (7) |
| C4—C5—C6—O1 | 2.6 (6) | C13—C14—C15—C16 | 0.2 (7) |
| C4—C5—C6—C7 | −178.2 (4) | C14—C15—C16—C17 | −1.2 (8) |
| C10—C5—C6—O1 | −178.8 (4) | C15—C16—C17—C12 | 0.6 (8) |
| C10—C5—C6—C7 | 0.5 (6) |
| H··· | ||||
| O1—H1 | 0.82 | 1.90 | 2.622 (5) | 147 |
| C2—H2··· | 0.93 | 2.88 | 3.499 (5) | 125 |
| C13—H13··· | 0.93 | 2.60 | 3.493 (5) | 161 |