Literature DB >> 21201569

Rietveld refinement of Ba(5)(AsO(4))(3)Cl from high-resolution synchrotron data.

Anthony M T Bell, C Michael B Henderson, Richard F Wendlandt, Wendy J Harrison.   

Abstract

The apatite-type compound Ba(5)(AsO(4))(3)Cl, penta-barium tris-[arsenate(V)] chloride, has been synthesized by ion exchange at high temperature from a synthetic sample of mimetite (Pb(5)(AsO(4))(3)Cl) with BaCO(3) as a by-product. The results of the Rietveld refinement, based on high resolution synchrotron X-ray powder diffraction data, show that the title compound crystallizes in the same structure as other halogenoapatites with general formula A(5)(YO(4))(3)X (A = divalent cation, Y = penta-valent cation, X = Cl, Br) in space group P6(3)/m. The structure consists of isolated tetra-hedral AsO(4) (3-) anions (m symmetry), separated by two crystallographically independent Ba(2+) cations that are located on mirror planes and threefold rotation axes, respectively. The Cl(-) anions are at the 2b sites ( symmetry) and are located in the channels of the structure.

Entities:  

Year:  2008        PMID: 21201569      PMCID: PMC2960624          DOI: 10.1107/S1600536808026901

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For crystal chemistry of apatites, see: Mercier et al. (2005 ▶); White & ZhiLi (2003 ▶); Wu et al. (2003 ▶). For powder diffraction data on Ba-containing As-apatites, see: Kreidler & Hummel (1970 ▶); Dunn & Rouse (1978 ▶). Atomic coordinates as starting parameters for the Rietveld (Rietveld, 1969 ▶) refinement of the present phases were taken from Chengjun et al. (2005 ▶); Dai et al. (1991 ▶); de Villiers et al. (1971 ▶). For related Ba—Cl-apatites, see: Đordevic et al. (2008 ▶); Hata et al. (1979 ▶); Reinen et al.(1986 ▶); Roh & Hong (2005 ▶); Schiff-Francois et al. (1979 ▶). For synthetic work, see: Baker (1966 ▶); Essington (1988 ▶); Harrison et al. (2002 ▶).

Experimental

Crystal data

As3Ba5ClO12 M = 1138.85 Hexagonal, a = 10.5570 (1) Å c = 7.73912 (8) Å V = 746.98 (1) Å3 Z = 2 Synchrotron radiation λ = 0.998043 Å μ = 56.07 (1) mm−1 T = 298 K Specimen shape: cylinder 40 × 0.7 × 0.7 mm Specimen prepared at 100 kPa Specimen prepared at 1258 K Particle morphology: powder, white

Data collection

In-house design diffractometer Specimen mounting: capillary Specimen mounted in transmission mode Scan method: step Absorption correction: none 2θmin = 2, 2θmax = 70° Increment in 2θ = 0.01°

Refinement

R p = 0.059 R wp = 0.082 R exp = 0.067 R B = 0.090 S = 1.23 Excluded region(s): 2-6 degrees 2θ. Profile function: Fundamental Parameters 464 Bragg reflections 21 parameters Preferred orientation correction: none Data collection: local software; cell refinement: CELREF (Laugier & Bochu, 2003 ▶); data reduction: local software; method used to solve structure: coordinates taken from a related compound; program(s) used to refine structure: TOPAS (Coelho, 2000 ▶); molecular graphics: Balls and Sticks (Kang & Ozawa, 2003 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808026901/wm2188sup1.cif Rietveld powder data: contains datablocks I. DOI: 10.1107/S1600536808026901/wm2188Isup2.rtv Additional supplementary materials: crystallographic information; 3D view; checkCIF report
As3Ba5Cl1O12Z = 2
Mr = 1138.85Dx = 5.063 (1) Mg m3
Hexagonal, P63/mSynchrotron radiation λ = 0.998043 Å
a = 10.5570 (1) ŵ = 56.07 (1) mm1
b = 10.5570 (1) ÅT = 298 K
c = 7.73912 (8) ÅSpecimen shape: cylinder
α = 90º40 × 0.7 × 0.7 mm
β = 90ºSpecimen prepared at 100 kPa
γ = 120ºSpecimen prepared at 1258 K
V = 746.98 (1) Å3Particle morphology: powder, white
In-house design diffractometerT = 298 K
Monochromator: Si(111) channel-cut crystalmin = 2, 2θmax = 70º
Specimen mounting: capillaryIncrement in 2θ = 0.01º
Specimen mounted in transmission modeIncrement in 2θ = 0.01º
Scan method: step
Rp = 0.059Profile function: Fundamental Parameters
Rwp = 0.08221 parameters
Rexp = 0.0673 constraints
RB = 0.090 ?
S = 1.23(Δ/σ)max = 0.001
Wavelength of incident radiation: 0.998043 ÅPreferred orientation correction: None
Excluded region(s): 2-6 degrees 2θ.
xyzUiso*/Ueq
Ba10.33330.66670.0061 (9)0.059 (1)
Ba20.2445 (4)0.9874 (6)0.25000.065 (1)
As10.4047 (7)0.3716 (7)0.25000.059 (2)
O10.347 (7)0.495 (6)0.25000.13 (2)
O20.591 (4)0.473 (4)0.25000.08 (1)
O30.354 (2)0.280 (3)0.068 (3)0.065 (8)
Cl10.00000.00000.00000.070 (6)
Ba1—O1i2.67 (5)Ba2—O3vi2.62 (4)
Ba1—O1ii2.67 (5)Ba2—O3vii3.05 (4)
Ba1—O12.67 (5)Ba2—O3viii3.05 (4)
Ba1—O2iii2.81 (4)Ba2—O1ii3.14 (4)
Ba1—O2iv2.81 (4)Ba2—Cl1viii3.281 (5)
Ba1—O2v2.81 (4)Ba2—Cl1ix3.281 (5)
Ba1—O3iv3.12 (3)As1—O31.64 (2)
Ba1—O3iii3.12 (3)As1—O3x1.64 (2)
Ba1—O3v3.12 (3)As1—O11.70 (8)
Ba2—O2i2.59 (4)As1—O21.70 (4)
Ba2—O3iv2.62 (4)
O3—As1—O3x118 (2)O3—As1—O2108 (2)
O3—As1—O1108 (1)O3x—As1—O2108 (2)
O3x—As1—O1108 (1)O1—As1—O2106 (2)
Ba1—O12.67 (5)
Ba1—O2i2.81 (4)
Ba1—O3i3.12 (3)
Ba2—O2ii2.59 (4)
Ba2—O3iii2.62 (4)
Ba2—O3iv3.05 (4)
Ba2—O1v3.14 (4)
Ba2—Cl1iv3.281 (5)
As1—O31.64 (2)
As1—O11.70 (8)
As1—O21.70 (4)
O3—As1—O3vi118 (2)
O3—As1—O1108 (1)
O3—As1—O2108 (2)
O1—As1—O2106 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  4 in total

1.  Structural derivation and crystal chemistry of apatites.

Authors:  T J White; Dong ZhiLi
Journal:  Acta Crystallogr B       Date:  2003-01-28

2.  Prediction of apatite lattice constants from their constituent elemental radii and artificial intelligence methods.

Authors:  P Wu; Y Z Zeng; C M Wang
Journal:  Biomaterials       Date:  2004-03       Impact factor: 12.479

3.  Geometrical parameterization of the crystal chemistry of P6(3)/m apatites: comparison with experimental data and ab initio results.

Authors:  Patrick H J Mercier; Yvon Le Page; Pamela S Whitfield; Lyndon D Mitchell; Isobel J Davidson; T J White
Journal:  Acta Crystallogr B       Date:  2005-11-14

4.  Sr, Ba and Cd arsenates with the apatite-type structure.

Authors:  Tamara Dordević; Sabina Sutović; Jovica Stojanović; Ljiljana Karanović
Journal:  Acta Crystallogr C       Date:  2008-08-09       Impact factor: 1.172

  4 in total
  1 in total

1.  Rietveld refinement of Sr(5)(AsO(4))(3)Cl from high-resolution synchrotron data.

Authors:  Anthony M T Bell; C Michael B Henderson; Richard F Wendlandt; Wendy J Harrison
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-21
  1 in total

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