Literature DB >> 21201368

trans-Tetra-aqua-bis(nicotinamide-κN)cadmium(II) biphenyl-4,4'-disulfonate.

Chunyuan Li, Min Chen, Changlun Shao.   

Abstract

In the title compound, [Cd(C(6)H(6)N(2)O)(2)(H(2)O)(4)](C(10)H(8)O(6)S(2)), the Cd(II) ion is located on a crystallographic inversion centre. An octa-hedral coordination geometry is defined by four water mol-ecules in one plane, and two trans N-atom donors of the nicotinamide ligands. The biphenyl-4,4'-disulfonate anion also lies on a crystallographic inversion centre. In the crystal structure, the complex cations are connected to the counter-anions via N-H⋯O and O-H⋯O hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2008        PMID: 21201368      PMCID: PMC2960200          DOI: 10.1107/S1600536808002390

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Beatty (2001 ▶); Christer et al. (2004 ▶); Holman et al. (2001 ▶); Lian & Li (2007a ▶,b ▶,c ▶,d ▶).

Experimental

Crystal data

[Cd(C6H6N2O)2(H2O)4](C10H8O6S2) M = 741.02 Monoclinic, a = 14.742 (8) Å b = 6.899 (4) Å c = 15.292 (8) Å β = 110.980 (9)° V = 1452.2 (13) Å3 Z = 2 Mo Kα radiation μ = 0.96 mm−1 T = 298 (2) K 0.40 × 0.36 × 0.31 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.682, T max = 0.741 7656 measured reflections 2842 independent reflections 2477 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.092 S = 1.07 2842 reflections 197 parameters H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −1.19 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808002390/fj2097sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808002390/fj2097Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd(C6H6N2O)2(H2O)4](C10H8O6S2)F000 = 752
Mr = 741.02Dx = 1.695 Mg m3
Monoclinic, P2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ycCell parameters from 7656 reflections
a = 14.742 (8) Åθ = 12–18º
b = 6.899 (4) ŵ = 0.97 mm1
c = 15.292 (8) ÅT = 298 (2) K
β = 110.980 (9)ºBlock, colourless
V = 1452.2 (13) Å30.40 × 0.36 × 0.31 mm
Z = 2
Bruker SMART APEX CCD diffractometer2842 independent reflections
Radiation source: fine-focus sealed tube2477 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.034
T = 298(2) Kθmax = 26.0º
φ and ω scansθmin = 3.3º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −18→12
Tmin = 0.682, Tmax = 0.741k = −8→7
7656 measured reflectionsl = −13→18
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.030  w = 1/[σ2(Fo2) + (0.0578P)2 + 0.3728P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.092(Δ/σ)max < 0.001
S = 1.07Δρmax = 0.58 e Å3
2842 reflectionsΔρmin = −1.19 e Å3
197 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.052 (2)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.50000.00000.50000.02772 (14)
S10.31842 (5)0.50038 (6)0.18505 (5)0.03230 (18)
O10.03394 (9)0.0836 (3)0.40310 (11)0.0485 (4)
O20.30985 (11)0.3259 (3)0.12698 (14)0.0544 (5)
O30.39387 (14)0.4851 (2)0.27876 (16)0.0462 (5)
O40.32299 (12)0.6768 (3)0.13379 (15)0.0582 (5)
O50.51977 (12)−0.2553 (3)0.41016 (16)0.0738 (7)
H5A0.4803−0.31930.36980.089*
H5B0.5698−0.28760.39760.089*
O60.51991 (12)0.2033 (3)0.38506 (14)0.0657 (6)
H6A0.48020.28890.35310.079*
H6B0.57010.25270.38170.079*
N10.34204 (14)−0.00860 (19)0.41343 (14)0.0296 (4)
N20.12317 (10)−0.1123 (3)0.52234 (10)0.0370 (4)
H2A0.0802−0.11480.54840.044*
H2B0.1766−0.17540.54690.044*
C10.27511 (17)−0.0072 (2)0.45320 (16)0.0279 (5)
H10.2932−0.00440.51800.033*
C20.18103 (17)−0.0100 (2)0.39791 (17)0.0277 (5)
C30.15424 (17)−0.0111 (2)0.29767 (16)0.0316 (5)
H30.0888−0.00660.26000.038*
C40.22217 (18)−0.0186 (3)0.25694 (16)0.0334 (5)
H40.2057−0.02490.19230.040*
C50.31554 (17)−0.0164 (2)0.31683 (16)0.0320 (5)
H50.3645−0.02020.29190.038*
C60.10639 (16)−0.0082 (2)0.44191 (16)0.0302 (5)
C70.21328 (17)0.5140 (2)0.20881 (19)0.0303 (5)
C80.21293 (18)0.4744 (3)0.30073 (19)0.0348 (5)
H80.27070.44550.34940.042*
C90.12884 (18)0.4791 (3)0.31652 (19)0.0349 (5)
H90.12710.45380.37560.042*
C100.04503 (16)0.5228 (2)0.24163 (18)0.0311 (5)
C110.04791 (14)0.5662 (3)0.15037 (15)0.0353 (4)
H11−0.00950.59760.10170.042*
C120.13142 (14)0.5621 (3)0.13407 (14)0.0342 (4)
H120.13380.59040.07540.041*
U11U22U33U12U13U23
Cd10.01281 (17)0.03481 (19)0.03689 (19)−0.00051 (5)0.01054 (11)−0.00146 (6)
S10.0174 (3)0.0352 (3)0.0500 (4)−0.00152 (14)0.0190 (3)−0.00351 (17)
O10.0210 (7)0.0697 (11)0.0582 (9)0.0136 (8)0.0181 (6)0.0197 (9)
O20.0275 (8)0.0627 (11)0.0810 (11)−0.0076 (8)0.0290 (8)−0.0316 (10)
O30.0196 (9)0.0565 (11)0.0619 (12)−0.0001 (5)0.0136 (8)−0.0056 (6)
O40.0369 (9)0.0594 (11)0.0942 (13)0.0054 (8)0.0427 (9)0.0243 (10)
O50.0318 (8)0.0794 (13)0.1183 (16)−0.0128 (9)0.0366 (10)−0.0596 (13)
O60.0289 (8)0.0791 (13)0.0921 (13)0.0042 (8)0.0254 (8)0.0459 (11)
N10.0152 (9)0.0393 (10)0.0338 (9)−0.0004 (5)0.0083 (7)−0.0008 (6)
N20.0186 (7)0.0542 (11)0.0399 (9)0.0035 (7)0.0125 (6)0.0069 (8)
C10.0161 (11)0.0381 (12)0.0295 (10)−0.0004 (6)0.0082 (8)0.0001 (6)
C20.0189 (11)0.0288 (10)0.0353 (12)0.0000 (6)0.0095 (9)−0.0004 (6)
C30.0184 (11)0.0377 (12)0.0340 (12)0.0001 (6)0.0036 (9)0.0009 (7)
C40.0283 (12)0.0421 (12)0.0277 (10)−0.0005 (7)0.0075 (9)−0.0006 (7)
C50.0228 (11)0.0398 (11)0.0362 (11)0.0007 (7)0.0139 (9)−0.0008 (7)
C60.0154 (10)0.0387 (12)0.0352 (11)−0.0019 (6)0.0074 (8)−0.0013 (7)
C70.0183 (11)0.0288 (10)0.0499 (13)−0.0005 (6)0.0197 (10)−0.0014 (7)
C80.0212 (10)0.0388 (10)0.0483 (13)0.0048 (7)0.0172 (9)0.0074 (8)
C90.0254 (11)0.0388 (11)0.0469 (12)0.0054 (7)0.0209 (10)0.0098 (8)
C100.0200 (11)0.0287 (9)0.0508 (12)0.0002 (7)0.0202 (9)−0.0007 (8)
C110.0195 (9)0.0427 (11)0.0454 (11)0.0000 (9)0.0139 (8)−0.0004 (10)
C120.0237 (9)0.0419 (10)0.0412 (10)−0.0029 (9)0.0169 (8)−0.0012 (10)
Cd1—N1i2.230 (2)C1—C21.341 (3)
Cd1—N12.230 (2)C1—H10.9300
Cd1—O5i2.316 (2)C2—C31.439 (3)
Cd1—O52.316 (2)C2—C61.481 (3)
Cd1—O6i2.3479 (19)C3—C41.357 (4)
Cd1—O62.3479 (19)C3—H30.9300
S1—O41.463 (2)C4—C51.353 (3)
S1—O31.470 (2)C4—H40.9300
S1—O21.4742 (19)C5—H50.9300
S1—C71.717 (2)C7—C121.373 (3)
O1—C61.200 (3)C7—C81.434 (4)
O5—H5A0.8108C8—C91.346 (3)
O5—H5B0.8551C8—H80.9300
O6—H6A0.8517C9—C101.384 (4)
O6—H6B0.8328C9—H90.9300
N1—C11.332 (3)C10—C10ii1.439 (4)
N1—C51.387 (3)C10—C111.443 (3)
N2—C61.368 (3)C11—C121.341 (3)
N2—H2A0.8600C11—H110.9300
N2—H2B0.8600C12—H120.9300
N1i—Cd1—N1180.00 (6)C2—C1—H1120.7
N1i—Cd1—O5i87.37 (7)C1—C2—C3119.9 (2)
N1—Cd1—O5i92.63 (7)C1—C2—C6118.8 (2)
N1i—Cd1—O592.63 (6)C3—C2—C6121.2 (2)
N1—Cd1—O587.37 (7)C4—C3—C2121.5 (2)
O5i—Cd1—O5180.0C4—C3—H3119.2
N1i—Cd1—O6i87.44 (7)C2—C3—H3119.2
N1—Cd1—O6i92.56 (7)C5—C4—C3115.4 (2)
O5i—Cd1—O6i86.23 (10)C5—C4—H4122.3
O5—Cd1—O6i93.77 (10)C3—C4—H4122.3
N1i—Cd1—O692.56 (7)C4—C5—N1123.5 (2)
N1—Cd1—O687.44 (7)C4—C5—H5118.3
O5i—Cd1—O693.77 (10)N1—C5—H5118.3
O5—Cd1—O686.23 (10)O1—C6—N2124.3 (2)
O6i—Cd1—O6180.0O1—C6—C2117.0 (2)
O4—S1—O3114.71 (11)N2—C6—C2118.65 (18)
O4—S1—O2111.55 (16)C12—C7—C8123.5 (2)
O3—S1—O2113.62 (11)C12—C7—S1115.34 (19)
O4—S1—C7106.64 (9)C8—C7—S1121.17 (18)
O3—S1—C7102.88 (13)C9—C8—C7119.9 (2)
O2—S1—C7106.44 (9)C9—C8—H8120.1
Cd1—O5—H5A131.1C7—C8—H8120.1
Cd1—O5—H5B129.3C8—C9—C10117.6 (2)
H5A—O5—H5B97.4C8—C9—H9121.2
Cd1—O6—H6A126.9C10—C9—H9121.2
Cd1—O6—H6B130.0C9—C10—C10ii117.4 (3)
H6A—O6—H6B97.1C9—C10—C11121.3 (2)
C1—N1—C5120.96 (19)C10ii—C10—C11121.4 (3)
C1—N1—Cd1121.05 (16)C12—C11—C10121.50 (19)
C5—N1—Cd1117.99 (15)C12—C11—H11119.3
C6—N2—H2A120.0C10—C11—H11119.3
C6—N2—H2B120.0C11—C12—C7116.2 (2)
H2A—N2—H2B120.0C11—C12—H12121.9
N1—C1—C2118.7 (2)C7—C12—H12121.9
N1—C1—H1120.7
D—H···AD—HH···AD···AD—H···A
O5—H5A···O3iii0.812.032.832 (3)171
O5—H5B···O4iv0.861.832.676 (2)172
O6—H6A···O30.851.932.777 (3)178
O6—H6B···O2v0.831.892.716 (3)171
N2—H2A···O1vi0.862.082.932 (2)171
N2—H2B···O2vii0.862.173.025 (3)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5A⋯O3i0.812.032.832 (3)171
O5—H5B⋯O4ii0.861.832.676 (2)172
O6—H6A⋯O30.851.932.777 (3)178
O6—H6B⋯O2iii0.831.892.716 (3)171
N2—H2A⋯O1iv0.862.082.932 (2)171
N2—H2B⋯O2v0.862.173.025 (3)172

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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