| Literature DB >> 21201271 |
Wu Zhang1, Qingxia Cui, Ling Chang, Zhaowen Yu.
Abstract
In the structure of the title complex, [Cu(C(8)H(4)O(4))(C(12)H(8)N(2))(H(2)O)]·CH(4)O, the Cu(II) ion is penta-coordinated in a tetra-gonal-pyramidal geometry, with two O atoms of the 3-formyl-2-oxidobenzoate (3-formyl-salicylate) anion and two N atoms of 1,10-phenanthroline occupying the basal plane, and a water O atom located at the apical site. The structure displays O-H⋯O hydrogen bonding.Entities:
Year: 2008 PMID: 21201271 PMCID: PMC2960304 DOI: 10.1107/S1600536807067967
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C8H4O4)(C12H8N2)(H2O)]·CH4O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1476 reflections | |
| θ = 2.4–23.1º | |
| µ = 1.20 mm−1 | |
| α = 115.125 (2)º | |
| β = 95.859 (2)º | Block, green |
| γ = 93.589 (2)º | 0.21 × 0.16 × 0.15 mm |
| Bruker APEXII CCD area-detector diffractometer | 2336 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 25.0º |
| θmin = 1.9º | |
| φ and ω scans | |
| Absorption correction: none | |
| 4953 measured reflections | |
| 3336 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 3336 reflections | Δρmax = 0.56 e Å−3 |
| 273 parameters | Δρmin = −0.40 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.04891 (5) | 0.15042 (5) | 0.43931 (4) | 0.04238 (18) | |
| O1W | 0.2655 (3) | 0.2918 (3) | 0.4306 (3) | 0.0690 (8) | |
| H1WA | 0.3370 | 0.2382 | 0.4054 | 0.083* | |
| H1WB | 0.2452 | 0.3275 | 0.3785 | 0.083* | |
| N1 | −0.1078 (3) | 0.2009 (3) | 0.3305 (3) | 0.0395 (7) | |
| N2 | 0.0517 (3) | −0.0202 (3) | 0.2729 (3) | 0.0366 (7) | |
| O1 | 0.0334 (3) | 0.4719 (2) | 0.7766 (2) | 0.0541 (7) | |
| O2 | −0.0072 (3) | 0.3010 (3) | 0.5848 (2) | 0.0518 (7) | |
| O3 | 0.1798 (3) | 0.0801 (2) | 0.5341 (2) | 0.0433 (6) | |
| O4 | 0.5232 (3) | −0.0845 (3) | 0.6619 (3) | 0.0694 (9) | |
| C1 | 0.2080 (4) | 0.2978 (3) | 0.7301 (3) | 0.0344 (8) | |
| C2 | 0.2507 (4) | 0.1602 (3) | 0.6484 (3) | 0.0347 (8) | |
| C3 | 0.3754 (4) | 0.1093 (4) | 0.6985 (3) | 0.0364 (8) | |
| C4 | 0.4531 (4) | 0.1902 (4) | 0.8211 (4) | 0.0455 (9) | |
| H4A | 0.5349 | 0.1545 | 0.8517 | 0.055* | |
| C5 | 0.4121 (5) | 0.3205 (4) | 0.8972 (4) | 0.0517 (10) | |
| H5A | 0.4649 | 0.3738 | 0.9788 | 0.062* | |
| C6 | 0.2905 (4) | 0.3714 (4) | 0.8503 (3) | 0.0433 (9) | |
| H6A | 0.2624 | 0.4601 | 0.9025 | 0.052* | |
| C7 | 0.0722 (4) | 0.3618 (4) | 0.6951 (3) | 0.0377 (8) | |
| C8 | 0.4236 (4) | −0.0293 (4) | 0.6237 (4) | 0.0480 (10) | |
| H8A | 0.3748 | −0.0798 | 0.5404 | 0.058* | |
| C9 | −0.1828 (4) | 0.3141 (4) | 0.3596 (4) | 0.0511 (10) | |
| H9A | −0.1596 | 0.3876 | 0.4413 | 0.061* | |
| C10 | −0.2942 (5) | 0.3298 (4) | 0.2752 (4) | 0.0560 (11) | |
| H10A | −0.3451 | 0.4116 | 0.3005 | 0.067* | |
| C11 | −0.3287 (5) | 0.2251 (4) | 0.1550 (4) | 0.0554 (11) | |
| H11A | −0.4043 | 0.2347 | 0.0979 | 0.066* | |
| C12 | −0.2512 (4) | 0.1027 (4) | 0.1166 (3) | 0.0429 (9) | |
| C13 | −0.2754 (5) | −0.0140 (4) | −0.0074 (4) | 0.0534 (11) | |
| H13A | −0.3494 | −0.0119 | −0.0695 | 0.064* | |
| C14 | −0.1935 (5) | −0.1267 (4) | −0.0360 (4) | 0.0546 (11) | |
| H14A | −0.2120 | −0.2007 | −0.1177 | 0.066* | |
| C15 | −0.0787 (4) | −0.1356 (4) | 0.0558 (3) | 0.0421 (9) | |
| C16 | 0.0130 (5) | −0.2480 (4) | 0.0336 (3) | 0.0505 (10) | |
| H16A | 0.0007 | −0.3254 | −0.0461 | 0.061* | |
| C17 | 0.1192 (5) | −0.2437 (4) | 0.1277 (4) | 0.0493 (10) | |
| H17A | 0.1810 | −0.3178 | 0.1126 | 0.059* | |
| C18 | 0.1366 (4) | −0.1285 (4) | 0.2479 (3) | 0.0429 (9) | |
| H18A | 0.2095 | −0.1276 | 0.3120 | 0.051* | |
| C19 | −0.0538 (4) | −0.0235 (4) | 0.1789 (3) | 0.0362 (8) | |
| C20 | −0.1402 (4) | 0.0960 (4) | 0.2081 (3) | 0.0373 (8) | |
| C21 | 0.6449 (6) | 0.4308 (6) | 0.6735 (6) | 0.108 (2) | |
| H21A | 0.6025 | 0.4468 | 0.7501 | 0.162* | |
| H21B | 0.6887 | 0.3416 | 0.6434 | 0.162* | |
| H21C | 0.5635 | 0.4275 | 0.6103 | 0.162* | |
| O5 | 0.7606 (4) | 0.5414 (3) | 0.6979 (3) | 0.0751 (9) | |
| H5 | 0.8459 | 0.5183 | 0.7138 | 0.113* |
| Cu1 | 0.0434 (3) | 0.0424 (3) | 0.0300 (3) | 0.0188 (2) | 0.00278 (19) | 0.0037 (2) |
| O1W | 0.0605 (19) | 0.0671 (19) | 0.092 (2) | 0.0250 (16) | 0.0175 (17) | 0.0422 (18) |
| N1 | 0.0402 (18) | 0.0358 (17) | 0.0363 (17) | 0.0096 (15) | 0.0087 (14) | 0.0085 (14) |
| N2 | 0.0324 (17) | 0.0363 (17) | 0.0342 (17) | 0.0068 (14) | 0.0089 (14) | 0.0074 (14) |
| O1 | 0.0666 (19) | 0.0384 (15) | 0.0413 (15) | 0.0236 (14) | 0.0049 (14) | 0.0001 (13) |
| O2 | 0.0540 (17) | 0.0520 (16) | 0.0321 (14) | 0.0283 (14) | 0.0016 (12) | 0.0000 (12) |
| O3 | 0.0487 (16) | 0.0346 (13) | 0.0327 (14) | 0.0154 (12) | −0.0007 (12) | 0.0014 (11) |
| O4 | 0.0579 (19) | 0.0649 (19) | 0.092 (2) | 0.0275 (16) | 0.0107 (17) | 0.0382 (18) |
| C1 | 0.036 (2) | 0.0324 (19) | 0.0313 (19) | 0.0047 (16) | 0.0042 (16) | 0.0100 (16) |
| C2 | 0.034 (2) | 0.036 (2) | 0.034 (2) | 0.0034 (17) | 0.0070 (16) | 0.0144 (17) |
| C3 | 0.032 (2) | 0.037 (2) | 0.042 (2) | 0.0041 (17) | 0.0067 (17) | 0.0188 (18) |
| C4 | 0.036 (2) | 0.051 (2) | 0.055 (3) | 0.0044 (19) | 0.0007 (19) | 0.030 (2) |
| C5 | 0.054 (3) | 0.049 (2) | 0.042 (2) | −0.003 (2) | −0.012 (2) | 0.015 (2) |
| C6 | 0.050 (2) | 0.033 (2) | 0.037 (2) | 0.0011 (18) | 0.0020 (18) | 0.0064 (17) |
| C7 | 0.041 (2) | 0.034 (2) | 0.032 (2) | 0.0050 (17) | 0.0070 (17) | 0.0079 (17) |
| C8 | 0.041 (2) | 0.049 (2) | 0.057 (3) | 0.011 (2) | 0.012 (2) | 0.024 (2) |
| C9 | 0.049 (2) | 0.046 (2) | 0.055 (3) | 0.014 (2) | 0.009 (2) | 0.018 (2) |
| C10 | 0.050 (3) | 0.054 (3) | 0.068 (3) | 0.019 (2) | 0.008 (2) | 0.029 (2) |
| C11 | 0.051 (3) | 0.064 (3) | 0.060 (3) | 0.006 (2) | −0.003 (2) | 0.038 (3) |
| C12 | 0.039 (2) | 0.050 (2) | 0.042 (2) | −0.0015 (19) | 0.0021 (18) | 0.025 (2) |
| C13 | 0.057 (3) | 0.062 (3) | 0.041 (2) | −0.011 (2) | −0.009 (2) | 0.029 (2) |
| C14 | 0.066 (3) | 0.053 (3) | 0.033 (2) | −0.012 (2) | −0.001 (2) | 0.010 (2) |
| C15 | 0.044 (2) | 0.042 (2) | 0.033 (2) | −0.0061 (19) | 0.0078 (18) | 0.0098 (17) |
| C16 | 0.058 (3) | 0.042 (2) | 0.034 (2) | −0.003 (2) | 0.016 (2) | −0.0004 (19) |
| C17 | 0.054 (3) | 0.036 (2) | 0.048 (2) | 0.0128 (19) | 0.022 (2) | 0.0048 (19) |
| C18 | 0.037 (2) | 0.043 (2) | 0.044 (2) | 0.0078 (18) | 0.0091 (18) | 0.0141 (18) |
| C19 | 0.037 (2) | 0.038 (2) | 0.0274 (19) | −0.0022 (17) | 0.0053 (16) | 0.0089 (16) |
| C20 | 0.035 (2) | 0.043 (2) | 0.032 (2) | −0.0003 (18) | 0.0048 (17) | 0.0157 (18) |
| C21 | 0.068 (4) | 0.116 (5) | 0.173 (6) | 0.040 (4) | 0.040 (4) | 0.085 (5) |
| O5 | 0.078 (2) | 0.0586 (19) | 0.085 (2) | 0.0297 (18) | 0.001 (2) | 0.0276 (18) |
| Cu1—O1W | 2.348 (3) | C8—H8A | 0.9300 |
| Cu1—O2 | 1.898 (2) | C9—C10 | 1.381 (5) |
| Cu1—O3 | 1.898 (2) | C9—H9A | 0.9300 |
| Cu1—N1 | 2.016 (3) | C10—C11 | 1.356 (5) |
| Cu1—N2 | 2.011 (3) | C10—H10A | 0.9300 |
| O1W—H1WA | 0.8500 | C11—C12 | 1.399 (5) |
| O1W—H1WB | 0.8499 | C11—H11A | 0.9300 |
| N1—C9 | 1.312 (4) | C12—C20 | 1.396 (5) |
| N1—C20 | 1.373 (4) | C12—C13 | 1.430 (5) |
| N2—C18 | 1.327 (4) | C13—C14 | 1.344 (5) |
| N2—C19 | 1.348 (4) | C13—H13A | 0.9300 |
| O1—C7 | 1.234 (4) | C14—C15 | 1.430 (5) |
| O2—C7 | 1.273 (4) | C14—H14A | 0.9300 |
| O3—C2 | 1.301 (4) | C15—C16 | 1.401 (5) |
| O4—C8 | 1.216 (4) | C15—C19 | 1.403 (4) |
| C1—C6 | 1.380 (5) | C16—C17 | 1.350 (5) |
| C1—C2 | 1.441 (4) | C16—H16A | 0.9300 |
| C1—C7 | 1.494 (5) | C17—C18 | 1.397 (5) |
| C2—C3 | 1.415 (5) | C17—H17A | 0.9300 |
| C3—C4 | 1.394 (5) | C18—H18A | 0.9300 |
| C3—C8 | 1.448 (5) | C19—C20 | 1.424 (5) |
| C4—C5 | 1.363 (5) | C21—O5 | 1.388 (5) |
| C4—H4A | 0.9300 | C21—H21A | 0.9600 |
| C5—C6 | 1.375 (5) | C21—H21B | 0.9600 |
| C5—H5A | 0.9300 | C21—H21C | 0.9600 |
| C6—H6A | 0.9300 | O5—H5 | 0.8200 |
| O1W—Cu1—O2 | 93.40 (11) | C3—C8—H8A | 117.6 |
| O1W—Cu1—O3 | 90.04 (10) | N1—C9—C10 | 123.4 (4) |
| O1W—Cu1—N1 | 96.50 (11) | N1—C9—H9A | 118.3 |
| O1W—Cu1—N2 | 97.69 (10) | C10—C9—H9A | 118.3 |
| O2—Cu1—O3 | 94.32 (10) | C11—C10—C9 | 119.5 (4) |
| O2—Cu1—N1 | 88.77 (11) | C11—C10—H10A | 120.2 |
| O2—Cu1—N2 | 166.01 (11) | C9—C10—H10A | 120.2 |
| O3—Cu1—N1 | 172.59 (11) | C10—C11—C12 | 120.2 (4) |
| O3—Cu1—N2 | 94.17 (11) | C10—C11—H11A | 119.9 |
| N1—Cu1—N2 | 81.55 (11) | C12—C11—H11A | 119.9 |
| Cu1—O1W—H1WA | 107.8 | C20—C12—C11 | 116.4 (4) |
| Cu1—O1W—H1WB | 112.5 | C20—C12—C13 | 118.0 (4) |
| H1WA—O1W—H1WB | 107.7 | C11—C12—C13 | 125.6 (4) |
| C9—N1—C20 | 117.2 (3) | C14—C13—C12 | 121.4 (4) |
| C9—N1—Cu1 | 130.2 (3) | C14—C13—H13A | 119.3 |
| C20—N1—Cu1 | 112.5 (2) | C12—C13—H13A | 119.3 |
| C18—N2—C19 | 118.4 (3) | C13—C14—C15 | 121.6 (4) |
| C18—N2—Cu1 | 128.5 (3) | C13—C14—H14A | 119.2 |
| C19—N2—Cu1 | 113.0 (2) | C15—C14—H14A | 119.2 |
| C7—O2—Cu1 | 126.8 (2) | C16—C15—C19 | 116.4 (4) |
| C2—O3—Cu1 | 123.3 (2) | C16—C15—C14 | 125.3 (4) |
| C6—C1—C2 | 118.7 (3) | C19—C15—C14 | 118.3 (4) |
| C6—C1—C7 | 117.6 (3) | C17—C16—C15 | 120.0 (3) |
| C2—C1—C7 | 123.6 (3) | C17—C16—H16A | 120.0 |
| O3—C2—C3 | 118.8 (3) | C15—C16—H16A | 120.0 |
| O3—C2—C1 | 124.2 (3) | C16—C17—C18 | 120.2 (4) |
| C3—C2—C1 | 117.0 (3) | C16—C17—H17A | 119.9 |
| C4—C3—C2 | 120.9 (3) | C18—C17—H17A | 119.9 |
| C4—C3—C8 | 118.5 (3) | N2—C18—C17 | 121.7 (4) |
| C2—C3—C8 | 120.6 (3) | N2—C18—H18A | 119.2 |
| C5—C4—C3 | 121.6 (3) | C17—C18—H18A | 119.2 |
| C5—C4—H4A | 119.2 | N2—C19—C15 | 123.5 (3) |
| C3—C4—H4A | 119.2 | N2—C19—C20 | 116.9 (3) |
| C4—C5—C6 | 118.3 (4) | C15—C19—C20 | 119.6 (3) |
| C4—C5—H5A | 120.8 | N1—C20—C12 | 123.3 (3) |
| C6—C5—H5A | 120.8 | N1—C20—C19 | 115.7 (3) |
| C5—C6—C1 | 123.6 (3) | C12—C20—C19 | 121.0 (3) |
| C5—C6—H6A | 118.2 | O5—C21—H21A | 109.5 |
| C1—C6—H6A | 118.2 | O5—C21—H21B | 109.5 |
| O1—C7—O2 | 120.1 (3) | H21A—C21—H21B | 109.5 |
| O1—C7—C1 | 118.9 (3) | O5—C21—H21C | 109.5 |
| O2—C7—C1 | 120.9 (3) | H21A—C21—H21C | 109.5 |
| O4—C8—C3 | 124.8 (4) | H21B—C21—H21C | 109.5 |
| O4—C8—H8A | 117.6 | C21—O5—H5 | 109.5 |
| O2—Cu1—N1—C9 | 12.7 (3) | C6—C1—C7—O2 | 178.7 (3) |
| N2—Cu1—N1—C9 | −177.4 (3) | C2—C1—C7—O2 | −5.4 (5) |
| O1W—Cu1—N1—C9 | −80.5 (3) | C4—C3—C8—O4 | 3.6 (5) |
| O2—Cu1—N1—C20 | −165.8 (2) | C2—C3—C8—O4 | −175.6 (3) |
| N2—Cu1—N1—C20 | 4.1 (2) | C20—N1—C9—C10 | 2.1 (5) |
| O1W—Cu1—N1—C20 | 100.9 (2) | Cu1—N1—C9—C10 | −176.3 (3) |
| O2—Cu1—N2—C18 | −134.6 (4) | N1—C9—C10—C11 | −0.8 (6) |
| O3—Cu1—N2—C18 | −7.3 (3) | C9—C10—C11—C12 | −0.5 (6) |
| N1—Cu1—N2—C18 | 178.7 (3) | C10—C11—C12—C20 | 0.4 (5) |
| O1W—Cu1—N2—C18 | 83.3 (3) | C10—C11—C12—C13 | −179.2 (4) |
| O2—Cu1—N2—C19 | 42.0 (6) | C20—C12—C13—C14 | −0.5 (5) |
| O3—Cu1—N2—C19 | 169.2 (2) | C11—C12—C13—C14 | 179.1 (4) |
| N1—Cu1—N2—C19 | −4.7 (2) | C12—C13—C14—C15 | 0.2 (6) |
| O1W—Cu1—N2—C19 | −100.2 (2) | C13—C14—C15—C16 | −179.2 (3) |
| O3—Cu1—O2—C7 | 25.9 (3) | C13—C14—C15—C19 | 0.7 (5) |
| N2—Cu1—O2—C7 | 153.2 (4) | C19—C15—C16—C17 | −0.6 (5) |
| N1—Cu1—O2—C7 | −160.8 (3) | C14—C15—C16—C17 | 179.3 (3) |
| O1W—Cu1—O2—C7 | −64.4 (3) | C15—C16—C17—C18 | 0.8 (6) |
| O2—Cu1—O3—C2 | −27.2 (3) | C19—N2—C18—C17 | 0.2 (5) |
| N2—Cu1—O3—C2 | 163.9 (3) | Cu1—N2—C18—C17 | 176.6 (2) |
| O1W—Cu1—O3—C2 | 66.2 (3) | C16—C17—C18—N2 | −0.7 (5) |
| Cu1—O3—C2—C3 | −163.8 (2) | C18—N2—C19—C15 | 0.0 (5) |
| Cu1—O3—C2—C1 | 17.9 (4) | Cu1—N2—C19—C15 | −176.9 (2) |
| C6—C1—C2—O3 | 178.8 (3) | C18—N2—C19—C20 | −178.5 (3) |
| C7—C1—C2—O3 | 2.8 (5) | Cu1—N2—C19—C20 | 4.6 (4) |
| C6—C1—C2—C3 | 0.4 (5) | C16—C15—C19—N2 | 0.2 (5) |
| C7—C1—C2—C3 | −175.5 (3) | C14—C15—C19—N2 | −179.7 (3) |
| O3—C2—C3—C4 | −178.9 (3) | C16—C15—C19—C20 | 178.6 (3) |
| C1—C2—C3—C4 | −0.5 (5) | C14—C15—C19—C20 | −1.2 (5) |
| O3—C2—C3—C8 | 0.3 (5) | C9—N1—C20—C12 | −2.3 (5) |
| C1—C2—C3—C8 | 178.7 (3) | Cu1—N1—C20—C12 | 176.5 (3) |
| C2—C3—C4—C5 | 0.2 (5) | C9—N1—C20—C19 | 178.4 (3) |
| C8—C3—C4—C5 | −179.0 (3) | Cu1—N1—C20—C19 | −2.9 (4) |
| C3—C4—C5—C6 | 0.2 (5) | C11—C12—C20—N1 | 1.1 (5) |
| C4—C5—C6—C1 | −0.3 (6) | C13—C12—C20—N1 | −179.4 (3) |
| C2—C1—C6—C5 | −0.1 (5) | C11—C12—C20—C19 | −179.7 (3) |
| C7—C1—C6—C5 | 176.1 (3) | C13—C12—C20—C19 | −0.1 (5) |
| Cu1—O2—C7—O1 | 169.4 (2) | N2—C19—C20—N1 | −1.1 (4) |
| Cu1—O2—C7—C1 | −13.8 (5) | C15—C19—C20—N1 | −179.7 (3) |
| C6—C1—C7—O1 | −4.5 (5) | N2—C19—C20—C12 | 179.5 (3) |
| C2—C1—C7—O1 | 171.4 (3) | C15—C19—C20—C12 | 0.9 (5) |
| H··· | ||||
| O5—H5···O1i | 0.82 | 1.89 | 2.703 (4) | 171 |
| O1W—H1WB···O5ii | 0.85 | 1.93 | 2.747 (4) | 162 |
| O1W—H1WA···O4iii | 0.85 | 2.00 | 2.844 (4) | 170 |
| Cu1—O1 | 2.348 (3) |
| Cu1—O2 | 1.898 (2) |
| Cu1—O3 | 1.898 (2) |
| Cu1—N1 | 2.016 (3) |
| Cu1—N2 | 2.011 (3) |
| O1 | 93.40 (11) |
| O1 | 90.04 (10) |
| O1 | 96.50 (11) |
| O1 | 97.69 (10) |
| O2—Cu1—O3 | 94.32 (10) |
| O2—Cu1—N1 | 88.77 (11) |
| O2—Cu1—N2 | 166.01 (11) |
| O3—Cu1—N1 | 172.59 (11) |
| O3—Cu1—N2 | 94.17 (11) |
| N1—Cu1—N2 | 81.55 (11) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5⋯O1i | 0.82 | 1.89 | 2.703 (4) | 171 |
| O1 | 0.85 | 1.93 | 2.747 (4) | 162 |
| O1 | 0.85 | 2.00 | 2.844 (4) | 170 |
Symmetry codes: (i) ; (ii) ; (iii) .