| Literature DB >> 21201146 |
Mehmet Akkurt, Serife Pınar Yalçın, Nalan Terzioğlu Klip, Orhan Büyükgüngör.
Abstract
Mol-ecules of the title spiro-[4.5]decane derivative, C(17)H(30)N(2)O(3)S, are linked by paired O-H⋯N hydrogen bonds into centrosymmetric R(2) (2)(16) dimers and these dimers are linked into a three-dimensional framework structure by C-H⋯O interactions.Entities:
Year: 2008 PMID: 21201146 PMCID: PMC2959234 DOI: 10.1107/S1600536808029097
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H30N2O3S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 28660 reflections | |
| θ = 2.2–27.4° | |
| µ = 0.20 mm−1 | |
| α = 79.901 (4)° | |
| β = 73.796 (4)° | Block, colourless |
| γ = 67.674 (4)° | 0.55 × 0.38 × 0.27 mm |
| STOE IPDS II diffractometer | 3717 independent reflections |
| Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 3297 reflections with |
| plane graphite | |
| Detector resolution: 6.67 pixels mm-1 | θmax = 26.5°, θmin = 2.7° |
| ω scans | |
| Absorption correction: integration (X-RED32; Stoe & Cie, 2002) | |
| 18506 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3717 reflections | (Δ/σ)max < 0.001 |
| 208 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| S1 | 0.35630 (5) | 0.26913 (4) | 0.21446 (3) | 0.0484 (1) | |
| O1 | 0.18488 (14) | 0.24461 (12) | 0.54122 (9) | 0.0578 (4) | |
| O2 | 0.74392 (17) | 0.18404 (13) | 0.83355 (9) | 0.0631 (4) | |
| O3 | 0.08914 (13) | 0.18609 (10) | 0.34973 (9) | 0.0505 (3) | |
| N1 | 0.43113 (15) | 0.26810 (11) | 0.40883 (9) | 0.0402 (3) | |
| N2 | 0.68062 (14) | 0.09805 (10) | 0.64605 (9) | 0.0379 (3) | |
| C1 | 0.17113 (18) | 0.28560 (13) | 0.34309 (12) | 0.0432 (4) | |
| C2 | 0.26212 (18) | 0.26248 (13) | 0.44208 (11) | 0.0421 (4) | |
| C3 | 0.51348 (17) | 0.28899 (13) | 0.28697 (10) | 0.0380 (3) | |
| C4 | 0.5285 (2) | 0.43629 (13) | 0.25620 (12) | 0.0453 (4) | |
| C5 | 0.6216 (2) | 0.45605 (14) | 0.13129 (12) | 0.0492 (4) | |
| C6 | 0.80738 (19) | 0.34126 (15) | 0.09591 (12) | 0.0459 (4) | |
| C7 | 0.78779 (19) | 0.19575 (14) | 0.12536 (12) | 0.0461 (4) | |
| C8 | 0.70039 (18) | 0.17493 (13) | 0.25161 (11) | 0.0425 (4) | |
| C9 | 0.8933 (2) | 0.36576 (18) | −0.02995 (13) | 0.0564 (5) | |
| C10 | 1.0855 (3) | 0.2653 (2) | −0.06975 (18) | 0.0795 (7) | |
| C11 | 0.52301 (19) | 0.26419 (13) | 0.49686 (11) | 0.0433 (4) | |
| C12 | 0.61041 (19) | 0.11222 (13) | 0.54526 (11) | 0.0422 (4) | |
| C13 | 0.53767 (18) | 0.14089 (15) | 0.74933 (11) | 0.0463 (4) | |
| C14 | 0.6216 (2) | 0.11142 (18) | 0.85005 (12) | 0.0582 (5) | |
| C15 | 0.8845 (2) | 0.14204 (18) | 0.73395 (14) | 0.0568 (5) | |
| C16 | 0.80961 (18) | 0.17138 (14) | 0.62963 (12) | 0.0440 (4) | |
| C17 | 0.0219 (2) | 0.43050 (16) | 0.34677 (16) | 0.0596 (5) | |
| H3 | 0.16610 | 0.10620 | 0.34800 | 0.0760* | |
| H4A | 0.40790 | 0.50770 | 0.27160 | 0.0540* | |
| H4B | 0.59660 | 0.44980 | 0.30410 | 0.0540* | |
| H5A | 0.63620 | 0.54780 | 0.11730 | 0.0590* | |
| H5B | 0.54430 | 0.45600 | 0.08390 | 0.0590* | |
| H6 | 0.88630 | 0.34690 | 0.14080 | 0.0550* | |
| H7A | 0.71400 | 0.18630 | 0.07950 | 0.0550* | |
| H7B | 0.90660 | 0.12260 | 0.10690 | 0.0550* | |
| H8A | 0.77890 | 0.17740 | 0.29720 | 0.0510* | |
| H8B | 0.68810 | 0.08240 | 0.26710 | 0.0510* | |
| H9A | 0.81850 | 0.35680 | −0.07540 | 0.0680* | |
| H9B | 0.89310 | 0.46220 | −0.04430 | 0.0680* | |
| H10A | 1.08690 | 0.16960 | −0.05860 | 0.0950* | |
| H10B | 1.16160 | 0.27450 | −0.02650 | 0.0950* | |
| H10C | 1.13010 | 0.28800 | −0.14940 | 0.0950* | |
| H11A | 0.43600 | 0.32010 | 0.55830 | 0.0520* | |
| H11B | 0.61590 | 0.30620 | 0.46440 | 0.0520* | |
| H12A | 0.52110 | 0.06600 | 0.56460 | 0.0510* | |
| H12B | 0.70950 | 0.06160 | 0.48560 | 0.0510* | |
| H13A | 0.45590 | 0.08870 | 0.76210 | 0.0560* | |
| H13B | 0.46810 | 0.24120 | 0.74030 | 0.0560* | |
| H14A | 0.52660 | 0.14080 | 0.91840 | 0.0700* | |
| H14B | 0.68560 | 0.01030 | 0.86120 | 0.0700* | |
| H15A | 0.95260 | 0.04150 | 0.74380 | 0.0680* | |
| H15B | 0.96720 | 0.19290 | 0.72350 | 0.0680* | |
| H16A | 0.74900 | 0.27260 | 0.61620 | 0.0530* | |
| H16B | 0.90790 | 0.13880 | 0.56340 | 0.0530* | |
| H17A | −0.03000 | 0.44790 | 0.28190 | 0.0720* | |
| H17B | 0.07200 | 0.50210 | 0.34490 | 0.0720* | |
| H17C | −0.07050 | 0.43310 | 0.41580 | 0.0720* |
| S1 | 0.0492 (2) | 0.0609 (2) | 0.0430 (2) | −0.0225 (2) | −0.0195 (1) | −0.0021 (1) |
| O1 | 0.0516 (6) | 0.0715 (7) | 0.0478 (6) | −0.0221 (5) | −0.0079 (5) | −0.0035 (5) |
| O2 | 0.0749 (7) | 0.0766 (7) | 0.0507 (6) | −0.0302 (6) | −0.0222 (5) | −0.0163 (5) |
| O3 | 0.0399 (5) | 0.0454 (5) | 0.0692 (6) | −0.0137 (4) | −0.0166 (5) | −0.0089 (4) |
| N1 | 0.0419 (5) | 0.0422 (5) | 0.0398 (5) | −0.0146 (4) | −0.0161 (4) | −0.0012 (4) |
| N2 | 0.0394 (5) | 0.0387 (5) | 0.0373 (5) | −0.0119 (4) | −0.0133 (4) | −0.0046 (4) |
| C1 | 0.0391 (6) | 0.0411 (6) | 0.0511 (7) | −0.0110 (5) | −0.0166 (5) | −0.0048 (5) |
| C2 | 0.0411 (6) | 0.0375 (6) | 0.0459 (7) | −0.0094 (5) | −0.0131 (5) | −0.0042 (5) |
| C3 | 0.0402 (6) | 0.0366 (6) | 0.0392 (6) | −0.0115 (5) | −0.0158 (5) | −0.0019 (5) |
| C4 | 0.0513 (7) | 0.0353 (6) | 0.0488 (7) | −0.0124 (5) | −0.0145 (6) | −0.0040 (5) |
| C5 | 0.0584 (8) | 0.0385 (7) | 0.0504 (7) | −0.0177 (6) | −0.0146 (6) | 0.0020 (5) |
| C6 | 0.0472 (7) | 0.0516 (7) | 0.0448 (7) | −0.0209 (6) | −0.0153 (6) | −0.0028 (5) |
| C7 | 0.0462 (7) | 0.0424 (7) | 0.0467 (7) | −0.0100 (6) | −0.0131 (6) | −0.0051 (5) |
| C8 | 0.0428 (7) | 0.0362 (6) | 0.0467 (7) | −0.0097 (5) | −0.0150 (5) | −0.0009 (5) |
| C9 | 0.0596 (9) | 0.0649 (9) | 0.0487 (8) | −0.0294 (8) | −0.0101 (7) | −0.0015 (7) |
| C10 | 0.0607 (10) | 0.0973 (14) | 0.0711 (12) | −0.0298 (10) | 0.0037 (9) | −0.0090 (10) |
| C11 | 0.0521 (7) | 0.0410 (6) | 0.0429 (7) | −0.0155 (6) | −0.0216 (6) | −0.0030 (5) |
| C12 | 0.0495 (7) | 0.0392 (6) | 0.0417 (6) | −0.0123 (5) | −0.0192 (6) | −0.0059 (5) |
| C13 | 0.0437 (7) | 0.0516 (7) | 0.0431 (7) | −0.0171 (6) | −0.0075 (6) | −0.0058 (5) |
| C14 | 0.0662 (9) | 0.0691 (10) | 0.0389 (7) | −0.0239 (8) | −0.0104 (7) | −0.0058 (6) |
| C15 | 0.0512 (8) | 0.0691 (10) | 0.0597 (9) | −0.0224 (7) | −0.0249 (7) | −0.0069 (7) |
| C16 | 0.0411 (6) | 0.0489 (7) | 0.0451 (7) | −0.0175 (6) | −0.0114 (5) | −0.0050 (5) |
| C17 | 0.0541 (8) | 0.0448 (8) | 0.0783 (11) | −0.0033 (6) | −0.0299 (8) | −0.0094 (7) |
| S1—C1 | 1.8347 (15) | C5—H5A | 0.9700 |
| S1—C3 | 1.8386 (15) | C5—H5B | 0.9700 |
| O1—C2 | 1.2179 (17) | C6—H6 | 0.9800 |
| O2—C14 | 1.412 (2) | C7—H7A | 0.9700 |
| O2—C15 | 1.420 (2) | C7—H7B | 0.9700 |
| O3—C1 | 1.3971 (18) | C8—H8A | 0.9700 |
| O3—H3 | 0.8200 | C8—H8B | 0.9700 |
| N1—C2 | 1.350 (2) | C9—H9A | 0.9700 |
| N1—C11 | 1.4623 (19) | C9—H9B | 0.9700 |
| N1—C3 | 1.4680 (16) | C10—H10A | 0.9600 |
| N2—C12 | 1.4620 (18) | C10—H10B | 0.9600 |
| N2—C16 | 1.466 (2) | C10—H10C | 0.9600 |
| N2—C13 | 1.4609 (18) | C11—H11A | 0.9700 |
| C1—C17 | 1.519 (2) | C11—H11B | 0.9700 |
| C1—C2 | 1.531 (2) | C12—H12A | 0.9700 |
| C3—C4 | 1.5300 (18) | C12—H12B | 0.9700 |
| C3—C8 | 1.5299 (19) | C13—H13A | 0.9700 |
| C4—C5 | 1.520 (2) | C13—H13B | 0.9700 |
| C5—C6 | 1.527 (2) | C14—H14A | 0.9700 |
| C6—C9 | 1.522 (2) | C14—H14B | 0.9700 |
| C6—C7 | 1.526 (2) | C15—H15A | 0.9700 |
| C7—C8 | 1.5237 (19) | C15—H15B | 0.9700 |
| C9—C10 | 1.513 (3) | C16—H16A | 0.9700 |
| C11—C12 | 1.5314 (18) | C16—H16B | 0.9700 |
| C13—C14 | 1.504 (2) | C17—H17A | 0.9600 |
| C15—C16 | 1.501 (2) | C17—H17B | 0.9600 |
| C4—H4A | 0.9700 | C17—H17C | 0.9600 |
| C4—H4B | 0.9700 | ||
| C1—S1—C3 | 94.89 (6) | C8—C7—H7B | 109.00 |
| C14—O2—C15 | 110.20 (12) | H7A—C7—H7B | 108.00 |
| C1—O3—H3 | 109.00 | C3—C8—H8A | 109.00 |
| C2—N1—C3 | 120.17 (12) | C3—C8—H8B | 109.00 |
| C3—N1—C11 | 121.19 (12) | C7—C8—H8A | 109.00 |
| C2—N1—C11 | 118.47 (11) | C7—C8—H8B | 109.00 |
| C12—N2—C13 | 113.18 (12) | H8A—C8—H8B | 108.00 |
| C13—N2—C16 | 109.95 (11) | C6—C9—H9A | 109.00 |
| C12—N2—C16 | 113.51 (11) | C6—C9—H9B | 109.00 |
| S1—C1—C2 | 104.46 (10) | C10—C9—H9A | 109.00 |
| S1—C1—C17 | 113.16 (10) | C10—C9—H9B | 109.00 |
| O3—C1—C2 | 112.49 (11) | H9A—C9—H9B | 108.00 |
| O3—C1—C17 | 106.76 (13) | C9—C10—H10A | 109.00 |
| C2—C1—C17 | 109.29 (12) | C9—C10—H10B | 109.00 |
| S1—C1—O3 | 110.80 (9) | C9—C10—H10C | 109.00 |
| O1—C2—N1 | 124.16 (14) | H10A—C10—H10B | 109.00 |
| N1—C2—C1 | 113.68 (11) | H10A—C10—H10C | 109.00 |
| O1—C2—C1 | 122.14 (14) | H10B—C10—H10C | 109.00 |
| S1—C3—N1 | 103.71 (10) | N1—C11—H11A | 109.00 |
| S1—C3—C4 | 110.66 (10) | N1—C11—H11B | 109.00 |
| N1—C3—C4 | 111.72 (10) | C12—C11—H11A | 109.00 |
| N1—C3—C8 | 111.49 (10) | C12—C11—H11B | 109.00 |
| S1—C3—C8 | 109.19 (9) | H11A—C11—H11B | 108.00 |
| C4—C3—C8 | 109.91 (12) | N2—C12—H12A | 108.00 |
| C3—C4—C5 | 111.93 (11) | N2—C12—H12B | 108.00 |
| C4—C5—C6 | 113.29 (12) | C11—C12—H12A | 108.00 |
| C5—C6—C7 | 109.26 (13) | C11—C12—H12B | 108.00 |
| C5—C6—C9 | 110.96 (12) | H12A—C12—H12B | 107.00 |
| C7—C6—C9 | 112.66 (12) | N2—C13—H13A | 110.00 |
| C6—C7—C8 | 111.36 (11) | N2—C13—H13B | 110.00 |
| C3—C8—C7 | 112.03 (11) | C14—C13—H13A | 110.00 |
| C6—C9—C10 | 114.58 (14) | C14—C13—H13B | 110.00 |
| N1—C11—C12 | 111.58 (11) | H13A—C13—H13B | 108.00 |
| N2—C12—C11 | 115.86 (11) | O2—C14—H14A | 109.00 |
| N2—C13—C14 | 109.49 (13) | O2—C14—H14B | 109.00 |
| O2—C14—C13 | 111.30 (12) | C13—C14—H14A | 109.00 |
| O2—C15—C16 | 111.43 (14) | C13—C14—H14B | 109.00 |
| N2—C16—C15 | 109.68 (12) | H14A—C14—H14B | 108.00 |
| C3—C4—H4A | 109.00 | O2—C15—H15A | 109.00 |
| C3—C4—H4B | 109.00 | O2—C15—H15B | 109.00 |
| C5—C4—H4A | 109.00 | C16—C15—H15A | 109.00 |
| C5—C4—H4B | 109.00 | C16—C15—H15B | 109.00 |
| H4A—C4—H4B | 108.00 | H15A—C15—H15B | 108.00 |
| C4—C5—H5A | 109.00 | N2—C16—H16A | 110.00 |
| C4—C5—H5B | 109.00 | N2—C16—H16B | 110.00 |
| C6—C5—H5A | 109.00 | C15—C16—H16A | 110.00 |
| C6—C5—H5B | 109.00 | C15—C16—H16B | 110.00 |
| H5A—C5—H5B | 108.00 | H16A—C16—H16B | 108.00 |
| C5—C6—H6 | 108.00 | C1—C17—H17A | 109.00 |
| C7—C6—H6 | 108.00 | C1—C17—H17B | 109.00 |
| C9—C6—H6 | 108.00 | C1—C17—H17C | 109.00 |
| C6—C7—H7A | 109.00 | H17A—C17—H17B | 109.00 |
| C6—C7—H7B | 109.00 | H17A—C17—H17C | 110.00 |
| C8—C7—H7A | 109.00 | H17B—C17—H17C | 109.00 |
| C3—S1—C1—O3 | −137.43 (10) | C12—N2—C16—C15 | −175.82 (11) |
| C3—S1—C1—C2 | −16.07 (9) | C17—C1—C2—O1 | 70.12 (17) |
| C3—S1—C1—C17 | 102.70 (12) | C17—C1—C2—N1 | −108.05 (14) |
| C1—S1—C3—N1 | 14.83 (9) | S1—C1—C2—N1 | 13.31 (13) |
| C1—S1—C3—C4 | −105.10 (10) | S1—C1—C2—O1 | −168.51 (11) |
| C1—S1—C3—C8 | 133.79 (9) | O3—C1—C2—N1 | 133.56 (12) |
| C14—O2—C15—C16 | 58.82 (17) | O3—C1—C2—O1 | −48.27 (17) |
| C15—O2—C14—C13 | −59.22 (17) | C4—C3—C8—C7 | −55.31 (15) |
| C11—N1—C3—C4 | −65.77 (16) | N1—C3—C8—C7 | −179.75 (12) |
| C2—N1—C11—C12 | 81.87 (15) | S1—C3—C4—C5 | −67.62 (15) |
| C11—N1—C2—O1 | −5.22 (19) | N1—C3—C4—C5 | 177.37 (13) |
| C3—N1—C2—C1 | −2.34 (16) | S1—C3—C8—C7 | 66.25 (13) |
| C2—N1—C3—C4 | 109.35 (14) | C8—C3—C4—C5 | 53.06 (16) |
| C3—N1—C11—C12 | −102.93 (14) | C3—C4—C5—C6 | −54.41 (18) |
| C11—N1—C3—C8 | 57.65 (15) | C4—C5—C6—C7 | 54.72 (17) |
| C11—N1—C2—C1 | 172.91 (10) | C4—C5—C6—C9 | 179.53 (13) |
| C3—N1—C2—O1 | 179.53 (12) | C5—C6—C7—C8 | −55.82 (16) |
| C11—N1—C3—S1 | 175.01 (9) | C5—C6—C9—C10 | 174.32 (15) |
| C2—N1—C3—C8 | −127.23 (13) | C7—C6—C9—C10 | −62.8 (2) |
| C2—N1—C3—S1 | −9.86 (13) | C9—C6—C7—C8 | −179.64 (13) |
| C13—N2—C16—C15 | 56.27 (14) | C6—C7—C8—C3 | 57.90 (17) |
| C12—N2—C13—C14 | 175.30 (11) | N1—C11—C12—N2 | −170.62 (12) |
| C16—N2—C13—C14 | −56.60 (14) | N2—C13—C14—O2 | 58.47 (16) |
| C13—N2—C12—C11 | 71.56 (15) | O2—C15—C16—N2 | −57.46 (16) |
| C16—N2—C12—C11 | −54.67 (16) |
| H··· | ||||
| O3—H3···N2i | 0.82 | 1.99 | 2.7994 (14) | 171 |
| C9—H9A···O2ii | 0.97 | 2.57 | 3.418 (2) | 146 |
| C15—H15B···O1iii | 0.97 | 2.55 | 3.249 (2) | 129 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯N2i | 0.82 | 1.99 | 2.7994 (14) | 171 |
| C9—H9 | 0.97 | 2.57 | 3.418 (2) | 146 |
| C15—H15 | 0.97 | 2.55 | 3.249 (2) | 129 |
Symmetry codes: (i) ; (ii) ; (iii) .