Literature DB >> 21201129

2,3,4,5,6-Penta-bromo-phenol.

Richard Betz1, Peter Klüfers, Peter Mayer.   

Abstract

The title compound, C(6)HBr(5)O, is the perbrominated derivative of phenol. The mol-ecule shows non-crystallographic mirror symmetry. Bond lengths between the C and Br atoms are normal. In the crystal structure, O-H⋯O hydrogen bonds connect the mol-ecules into infinite strands. Dispersive BrBr contacts are observed. No significant π-π stacking is obvious.

Entities:  

Year:  2008        PMID: 21201129      PMCID: PMC2959417          DOI: 10.1107/S1600536808028602

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the perfluorinated derivative of phenol, see: Das et al. (2006 ▶); Gdaniec (2007 ▶). For the structure of 2,3,4,5,6-penta­chloro­phenol, see: Sakurai (1962 ▶).

Experimental

Crystal data

C6HBr5O M = 488.57 Monoclinic, a = 32.3058 (15) Å b = 3.9957 (2) Å c = 16.1887 (8) Å β = 112.118 (3)° V = 1935.93 (17) Å3 Z = 8 Mo Kα radiation μ = 20.70 mm−1 T = 200 (2) K 0.28 × 0.08 × 0.05 mm

Data collection

Nonius Kappa CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2001 ▶) T min = 0.062, T max = 0.355 13465 measured reflections 2219 independent reflections 1930 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.074 S = 1.03 2219 reflections 111 parameters H-atom parameters constrained Δρmax = 0.88 e Å−3 Δρmin = −1.02 e Å−3 Data collection: COLLECT (Nonius, 2004 ▶); cell refinement: SCALEPACK (Otwinowski & Minor 1997 ▶); data reduction: DENZO (Otwinowski & Minor 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808028602/rk2109sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808028602/rk2109Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6HBr5OF(000) = 1760
Mr = 488.57Dx = 3.353 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 8265 reflections
a = 32.3058 (15) Åθ = 3.1–27.5°
b = 3.9957 (2) ŵ = 20.70 mm1
c = 16.1887 (8) ÅT = 200 K
β = 112.118 (3)°Rod, colourless
V = 1935.93 (17) Å30.28 × 0.08 × 0.05 mm
Z = 8
Nonius Kappa CCD diffractometer2219 independent reflections
Radiation source: Rotating anode1930 reflections with I > 2σ(I)
MONTEL, graded multilayered X-ray opticsRint = 0.054
Rotation images; thick slices scansθmax = 27.6°, θmin = 3.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 2001)h = −41→41
Tmin = 0.062, Tmax = 0.355k = −4→5
13465 measured reflectionsl = −21→21
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: FullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.075w = 1/[σ2(Fo2) + (0.0374P)2 + 5.8817P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
2219 reflectionsΔρmax = 0.88 e Å3
111 parametersΔρmin = −1.02 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00087 (8)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.204848 (13)0.51248 (10)0.41077 (2)0.03029 (14)
Br20.096769 (13)0.38703 (10)0.36125 (2)0.02821 (13)
Br30.024427 (13)0.61492 (11)0.16493 (3)0.03106 (14)
Br40.060474 (12)0.97946 (11)0.02144 (2)0.02709 (13)
Br50.169251 (13)1.09979 (10)0.07733 (2)0.02651 (13)
O10.22213 (8)0.8423 (7)0.26447 (18)0.0289 (6)
H10.22710.96430.22700.043*
C10.17732 (11)0.7978 (9)0.2394 (2)0.0213 (7)
C20.16196 (12)0.6421 (9)0.2996 (2)0.0216 (7)
C30.11662 (12)0.5889 (9)0.2773 (2)0.0211 (7)
C40.08601 (11)0.6883 (9)0.1945 (2)0.0213 (7)
C50.10107 (12)0.8416 (8)0.1339 (2)0.0209 (7)
C60.14663 (12)0.8957 (8)0.1567 (2)0.0197 (7)
U11U22U33U12U13U23
Br10.0248 (2)0.0387 (3)0.0229 (2)0.00504 (16)0.00385 (16)0.00541 (16)
Br20.0300 (2)0.0331 (2)0.0244 (2)−0.00243 (15)0.01352 (16)0.00349 (14)
Br30.0171 (2)0.0443 (3)0.0318 (2)−0.00324 (15)0.00924 (16)0.00412 (16)
Br40.0201 (2)0.0377 (2)0.0212 (2)0.00309 (15)0.00524 (15)0.00423 (14)
Br50.0238 (2)0.0331 (2)0.0255 (2)−0.00301 (14)0.01252 (16)0.00230 (14)
O10.0160 (12)0.0393 (16)0.0315 (14)0.0005 (11)0.0091 (11)0.0025 (12)
C10.0146 (16)0.0222 (16)0.0260 (17)−0.0013 (14)0.0066 (13)−0.0031 (14)
C20.0188 (18)0.0236 (18)0.0201 (16)0.0003 (14)0.0048 (13)−0.0015 (13)
C30.0237 (19)0.0211 (16)0.0208 (17)−0.0001 (13)0.0110 (14)−0.0028 (13)
C40.0146 (16)0.0261 (17)0.0244 (17)−0.0029 (14)0.0087 (13)−0.0038 (14)
C50.0196 (17)0.0237 (17)0.0184 (15)−0.0001 (14)0.0061 (13)−0.0027 (13)
C60.0213 (17)0.0215 (17)0.0207 (16)−0.0026 (14)0.0129 (13)−0.0009 (13)
Br1—C21.884 (3)C1—C61.389 (5)
Br2—C31.888 (4)C1—C21.395 (5)
Br3—C41.886 (3)C2—C31.387 (5)
Br4—C51.882 (3)C3—C41.391 (5)
Br5—C61.886 (4)C4—C51.390 (5)
O1—C11.360 (4)C5—C61.393 (5)
O1—H10.8400
C1—O1—H1109.5C5—C4—C3119.7 (3)
O1—C1—C6122.9 (3)C5—C4—Br3120.4 (2)
O1—C1—C2117.9 (3)C3—C4—Br3120.0 (3)
C6—C1—C2119.1 (3)C4—C5—C6119.8 (3)
C3—C2—C1120.3 (3)C4—C5—Br4120.7 (3)
C3—C2—Br1122.1 (3)C6—C5—Br4119.5 (3)
C1—C2—Br1117.6 (3)C1—C6—C5120.7 (3)
C2—C3—C4120.4 (3)C1—C6—Br5117.4 (3)
C2—C3—Br2119.3 (3)C5—C6—Br5121.9 (3)
C4—C3—Br2120.3 (3)
O1—C1—C2—C3−179.7 (3)C3—C4—C5—C6−0.2 (5)
C6—C1—C2—C3−0.6 (5)Br3—C4—C5—C6179.7 (3)
O1—C1—C2—Br10.7 (4)C3—C4—C5—Br4−179.9 (3)
C6—C1—C2—Br1179.8 (3)Br3—C4—C5—Br40.1 (4)
C1—C2—C3—C40.4 (5)O1—C1—C6—C5179.4 (3)
Br1—C2—C3—C4180.0 (3)C2—C1—C6—C50.4 (5)
C1—C2—C3—Br2−178.5 (3)O1—C1—C6—Br5−0.2 (5)
Br1—C2—C3—Br21.1 (4)C2—C1—C6—Br5−179.2 (3)
C2—C3—C4—C50.0 (5)C4—C5—C6—C10.0 (5)
Br2—C3—C4—C5178.9 (3)Br4—C5—C6—C1179.7 (3)
C2—C3—C4—Br3−179.9 (3)C4—C5—C6—Br5179.6 (3)
Br2—C3—C4—Br3−1.1 (4)Br4—C5—C6—Br5−0.7 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···O1i0.842.192.844 (4)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O1i0.842.192.844 (4)134

Symmetry code: (i) .

  2 in total

1.  Synthon evolution and unit cell evolution during crystallisation. A study of symmetry-independent molecules (Z' > 1) in crystals of some hydroxy compounds.

Authors:  Dinabandhu Das; Rahul Banerjee; Raju Mondal; Judith A K Howard; Roland Boese; Gautam R Desiraju
Journal:  Chem Commun (Camb)       Date:  2005-12-20       Impact factor: 6.222

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total
  1 in total

1.  Anomalous halogen bonds in the crystal structures of 1,2,3-tri-bromo-5-nitro-benzene and 1,3-di-bromo-2-iodo-5-nitro-benzene.

Authors:  José A Romero; Gerardo Aguirre Hernández; Sylvain Bernès
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-07-22
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.