Literature DB >> 21201077

Poly[aqua-[μ(3)-N'-(carboxy-meth-yl)ethyl-ene-diamine-N,N,N'-triacetato]samarium(III)].

Guo-Yong Zhou1, Gui-Rong Wu, Zhi-Yong Deng, Xing-Tian Chen.   

Abstract

In the title coordination polymer, [Sm(C(10)H(13)N(2)O(8))(H(2)O)](n), each samarium(III) centre is nine-coordinated by six O and two N atoms from three N'-(carboxy-meth-yl)ethyl-enediamine-N,N,N'-triacetate ligands and one O atom of a water mol-ecule, forming polymeric chains running parallel to the a axis. The packing is governed by inter-molecular O-H⋯O hydrogen-bonding inter-actions.

Entities:  

Year:  2008        PMID: 21201077      PMCID: PMC2959472          DOI: 10.1107/S1600536808031036

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the corresponding neodymium polymeric complex, see: Huang et al. (2008 ▶). For related literature, see: Dakanali et al. (2003 ▶); Kitaura et al. (2002 ▶); Rowsell et al. (2004 ▶).

Experimental

Crystal data

[Sm(C10H13N2O8)(H2O)] M = 457.60 Orthorhombic, a = 6.6506 (7) Å b = 14.7051 (16) Å c = 25.967 (3) Å V = 2539.5 (5) Å3 Z = 8 Mo Kα radiation μ = 4.68 mm−1 T = 296 (2) K 0.23 × 0.19 × 0.18 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.355, T max = 0.433 13066 measured reflections 2637 independent reflections 2289 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.064 S = 1.03 2637 reflections 206 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.94 e Å−3 Δρmin = −1.21 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I. DOI: 10.1107/S1600536808031036/rz2243sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031036/rz2243Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sm(C10H13N2O8)(H2O)]F(000) = 1784
Mr = 457.60Dx = 2.394 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 3600 reflections
a = 6.6506 (7) Åθ = 1.7–28.0°
b = 14.7051 (16) ŵ = 4.68 mm1
c = 25.967 (3) ÅT = 296 K
V = 2539.5 (5) Å3Block, colourless
Z = 80.23 × 0.19 × 0.18 mm
Bruker APEXII area-detector diffractometer2637 independent reflections
Radiation source: fine-focus sealed tube2289 reflections with I > 2σ(I)
graphiteRint = 0.035
φ and ω scanθmax = 26.5°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→5
Tmin = 0.355, Tmax = 0.433k = −16→18
13066 measured reflectionsl = −32→32
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.064H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0288P)2 + 6.2721P] where P = (Fo2 + 2Fc2)/3
2637 reflections(Δ/σ)max = 0.002
206 parametersΔρmax = 0.94 e Å3
3 restraintsΔρmin = −1.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Sm11.07590 (3)0.506856 (12)0.420681 (7)0.01387 (8)
C11.2133 (6)0.3523 (3)0.33453 (14)0.0168 (8)
C21.0904 (6)0.2870 (3)0.36651 (15)0.0186 (8)
H2A1.01700.24670.34370.022*
H2B1.18070.25000.38700.022*
C30.7461 (6)0.3440 (3)0.37554 (15)0.0197 (8)
H3A0.65430.37390.39910.024*
H3B0.69180.28430.36780.024*
C40.7586 (6)0.3985 (3)0.32648 (14)0.0193 (8)
H4A0.85800.37130.30390.023*
H4B0.62970.39650.30900.023*
C50.9165 (6)0.5334 (3)0.29164 (15)0.0186 (8)
H5A0.81890.54860.26520.022*
H5B1.00970.48930.27740.022*
C61.0293 (6)0.6179 (3)0.30788 (15)0.0178 (8)
C70.6310 (6)0.5491 (3)0.34790 (15)0.0199 (9)
H7A0.51630.52050.33150.024*
H7B0.64670.60910.33290.024*
C80.5880 (6)0.5592 (3)0.40475 (15)0.0166 (8)
C90.9173 (6)0.2796 (3)0.44879 (15)0.0194 (9)
H9A1.02770.23690.45220.023*
H9B0.79420.24470.44580.023*
C100.9064 (6)0.3372 (3)0.49695 (15)0.0173 (8)
N10.9459 (5)0.3332 (2)0.40114 (12)0.0164 (7)
N20.8138 (5)0.4946 (2)0.33643 (12)0.0173 (7)
O11.2293 (4)0.43367 (18)0.34962 (10)0.0207 (6)
O21.2980 (5)0.32419 (18)0.29435 (10)0.0235 (7)
O31.0724 (4)0.63138 (19)0.35307 (11)0.0232 (7)
O41.0758 (5)0.6717 (2)0.27029 (11)0.0292 (7)
H41.11820.71990.28190.044*
O50.9074 (4)0.42346 (18)0.49227 (10)0.0203 (6)
O60.7369 (4)0.5605 (2)0.43483 (10)0.0233 (6)
O70.4107 (4)0.57144 (19)0.41872 (11)0.0211 (6)
O80.9000 (5)0.2985 (2)0.53938 (11)0.0294 (7)
O1W1.3250 (5)0.3977 (2)0.46232 (11)0.0271 (7)
H2W1.350 (8)0.3428 (10)0.4613 (15)0.041*
H1W1.348 (8)0.412 (3)0.4922 (7)0.041*
U11U22U33U12U13U23
Sm10.01036 (12)0.01782 (12)0.01343 (12)0.00028 (8)0.00067 (7)−0.00100 (8)
C10.0145 (19)0.021 (2)0.0153 (18)0.0028 (16)0.0001 (15)−0.0005 (15)
C20.019 (2)0.0179 (19)0.019 (2)0.0032 (17)0.0014 (16)0.0000 (16)
C30.016 (2)0.0196 (19)0.023 (2)−0.0039 (17)−0.0008 (18)−0.0007 (16)
C40.017 (2)0.022 (2)0.0197 (19)−0.0027 (16)−0.0040 (17)−0.0026 (15)
C50.019 (2)0.022 (2)0.0152 (19)−0.0017 (17)−0.0002 (16)−0.0008 (16)
C60.0142 (19)0.018 (2)0.021 (2)0.0000 (16)0.0007 (16)0.0010 (16)
C70.016 (2)0.026 (2)0.018 (2)0.0035 (17)0.0008 (16)0.0034 (17)
C80.014 (2)0.0157 (18)0.020 (2)−0.0015 (15)0.0019 (16)−0.0007 (15)
C90.025 (2)0.017 (2)0.016 (2)0.0001 (17)0.0005 (17)0.0022 (15)
C100.0102 (19)0.024 (2)0.0176 (19)−0.0010 (16)0.0031 (15)0.0005 (16)
N10.0181 (18)0.0169 (16)0.0143 (16)0.0004 (14)0.0019 (13)0.0000 (13)
N20.0138 (16)0.0193 (17)0.0187 (16)0.0011 (14)0.0008 (13)0.0005 (14)
O10.0174 (15)0.0206 (14)0.0242 (14)−0.0011 (12)0.0052 (12)−0.0055 (12)
O20.0319 (18)0.0201 (14)0.0186 (14)0.0006 (13)0.0078 (12)−0.0020 (12)
O30.0277 (17)0.0257 (16)0.0163 (14)−0.0039 (13)−0.0037 (12)0.0008 (12)
O40.046 (2)0.0227 (16)0.0190 (15)−0.0149 (15)0.0017 (14)0.0007 (12)
O50.0218 (16)0.0184 (14)0.0209 (15)−0.0051 (12)0.0034 (12)−0.0039 (11)
O60.0133 (14)0.0355 (17)0.0211 (14)0.0051 (13)−0.0039 (12)−0.0038 (12)
O70.0115 (14)0.0224 (15)0.0295 (16)−0.0004 (11)0.0016 (12)−0.0047 (12)
O80.0337 (19)0.0355 (18)0.0189 (15)0.0007 (15)0.0027 (13)0.0061 (13)
O1W0.0303 (18)0.0290 (17)0.0221 (16)0.0045 (15)−0.0043 (14)0.0029 (13)
Sm1—O12.367 (3)C5—C61.512 (5)
Sm1—O62.416 (3)C5—H5A0.9700
Sm1—O7i2.421 (3)C5—H5B0.9700
Sm1—O5ii2.484 (3)C6—O31.224 (5)
Sm1—O52.493 (3)C6—O41.294 (5)
Sm1—O32.537 (3)C7—N21.486 (5)
Sm1—O1W2.548 (3)C7—C81.511 (5)
Sm1—N12.744 (3)C7—H7A0.9700
Sm1—N22.803 (3)C7—H7B0.9700
C1—O21.256 (4)C8—O71.247 (5)
C1—O11.263 (5)C8—O61.261 (5)
C1—C21.510 (5)C9—N11.479 (5)
C2—N11.481 (5)C9—C101.512 (5)
C2—H2A0.9700C9—H9A0.9700
C2—H2B0.9700C9—H9B0.9700
C3—N11.494 (5)C10—O81.241 (5)
C3—C41.507 (5)C10—O51.274 (5)
C3—H3A0.9700O4—H40.8200
C3—H3B0.9700O5—Sm1ii2.484 (3)
C4—N21.483 (5)O7—Sm1iii2.421 (3)
C4—H4A0.9700O1W—H2W0.823 (10)
C4—H4B0.9700O1W—H1W0.820 (10)
C5—N21.464 (5)
O1—Sm1—O6131.98 (9)N2—C4—H4B109.2
O1—Sm1—O7i76.45 (9)C3—C4—H4B109.2
O6—Sm1—O7i137.16 (10)H4A—C4—H4B107.9
O1—Sm1—O5ii151.34 (10)N2—C5—C6109.3 (3)
O6—Sm1—O5ii76.64 (9)N2—C5—H5A109.8
O7i—Sm1—O5ii79.40 (9)C6—C5—H5A109.8
O1—Sm1—O5123.46 (9)N2—C5—H5B109.8
O6—Sm1—O568.14 (9)C6—C5—H5B109.8
O7i—Sm1—O5128.46 (9)H5A—C5—H5B108.3
O5ii—Sm1—O562.91 (10)O3—C6—O4124.6 (4)
O1—Sm1—O378.03 (9)O3—C6—C5121.1 (4)
O6—Sm1—O382.03 (9)O4—C6—C5114.2 (3)
O7i—Sm1—O373.18 (9)N2—C7—C8113.8 (3)
O5ii—Sm1—O3109.41 (9)N2—C7—H7A108.8
O5—Sm1—O3150.11 (9)C8—C7—H7A108.8
O1—Sm1—O1W76.36 (9)N2—C7—H7B108.8
O6—Sm1—O1W138.39 (10)C8—C7—H7B108.8
O7i—Sm1—O1W70.02 (10)H7A—C7—H7B107.7
O5ii—Sm1—O1W81.07 (10)O7—C8—O6124.1 (4)
O5—Sm1—O1W70.48 (10)O7—C8—C7118.5 (3)
O3—Sm1—O1W138.98 (10)O6—C8—C7117.2 (3)
O1—Sm1—N164.43 (9)N1—C9—C10113.6 (3)
O6—Sm1—N192.16 (10)N1—C9—H9A108.9
O7i—Sm1—N1130.62 (9)C10—C9—H9A108.9
O5ii—Sm1—N1124.49 (9)N1—C9—H9B108.9
O5—Sm1—N162.50 (9)C10—C9—H9B108.9
O3—Sm1—N1122.76 (9)H9A—C9—H9B107.7
O1W—Sm1—N172.34 (10)O8—C10—O5122.8 (4)
O1—Sm1—N268.30 (10)O8—C10—C9118.6 (4)
O6—Sm1—N263.86 (9)O5—C10—C9118.6 (3)
O7i—Sm1—N2125.50 (9)C9—N1—C2110.3 (3)
O5ii—Sm1—N2139.87 (9)C9—N1—C3108.3 (3)
O5—Sm1—N2105.71 (9)C2—N1—C3110.8 (3)
O3—Sm1—N260.04 (9)C9—N1—Sm1112.4 (2)
O1W—Sm1—N2134.02 (10)C2—N1—Sm1109.5 (2)
N1—Sm1—N266.42 (9)C3—N1—Sm1105.3 (2)
O2—C1—O1122.1 (4)C5—N2—C4110.4 (3)
O2—C1—C2119.3 (3)C5—N2—C7109.3 (3)
O1—C1—C2118.5 (3)C4—N2—C7110.2 (3)
N1—C2—C1113.2 (3)C5—N2—Sm1107.8 (2)
N1—C2—H2A108.9C4—N2—Sm1110.6 (2)
C1—C2—H2A108.9C7—N2—Sm1108.5 (2)
N1—C2—H2B108.9C1—O1—Sm1129.5 (2)
C1—C2—H2B108.9C6—O3—Sm1123.3 (3)
H2A—C2—H2B107.8C6—O4—H4109.5
N1—C3—C4112.6 (3)C10—O5—Sm1ii108.9 (2)
N1—C3—H3A109.1C10—O5—Sm1124.3 (2)
C4—C3—H3A109.1Sm1ii—O5—Sm1117.09 (10)
N1—C3—H3B109.1C8—O6—Sm1129.3 (2)
C4—C3—H3B109.1C8—O7—Sm1iii145.0 (3)
H3A—C3—H3B107.8Sm1—O1W—H2W137 (3)
N2—C4—C3111.9 (3)Sm1—O1W—H1W111 (3)
N2—C4—H4A109.2H2W—O1W—H1W104 (4)
C3—C4—H4A109.2
D—H···AD—HH···AD···AD—H···A
O4—H4···O2iv0.821.662.474 (4)170.
O1W—H1W···O6ii0.82 (1)2.02 (2)2.771 (4)153.(2)
O1W—H2W···O8v0.82 (1)2.10 (2)2.928 (4)177.(2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O2i0.821.662.474 (4)170
O1W—H1W⋯O6ii0.820 (10)2.02 (2)2.771 (4)152.8 (18)
O1W—H2W⋯O8iii0.823 (10)2.10 (2)2.928 (4)177.1 (15)

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Poly[aqua-[μ-N'-(carboxymethyl)ethylene-diamine--N,N,N'-triacetato]neodymium(III)].

Authors:  Xiao-Hui Huang; Xiao-Hong Xu; Wei-Bo Pan; Rong-Hua Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-23

3.  A pillared-layer coordination polymer network displaying hysteretic sorption: [Cu(2)(pzdc)(2)(dpyg)](n) (pzdc= pyrazine-2,3-dicarboxylate; dpyg=1,2-Di(4-pyridyl)glycol).

Authors:  Ryo Kitaura; Kentaro Fujimoto; Shin-Ichiro Noro; Mitsuru Kondo; Susumu Kitagawa
Journal:  Angew Chem Int Ed Engl       Date:  2002-01-04       Impact factor: 15.336

4.  Synthesis and spectroscopic and structural studies of a new cadmium(II)-citrate aqueous complex. Potential relevance to cadmium(II)-citrate speciation and links to cadmium toxicity.

Authors:  M Dakanali; E T Kefalas; C P Raptopoulou; A Terzis; T Mavromoustakos; A Salifoglou
Journal:  Inorg Chem       Date:  2003-04-21       Impact factor: 5.165

5.  Hydrogen sorption in functionalized metal-organic frameworks.

Authors:  Jesse L C Rowsell; Andrew R Millward; Kyo Sung Park; Omar M Yaghi
Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

  5 in total

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