| Literature DB >> 21200862 |
Simona Margutti, Dieter Schollmeyer, Stefan Laufer.
Abstract
The crystal structure of the title compound, C(16)H(16)FN(2)O(2) (+)·I(-), was determined as part of a study of the biological activity of isoxazolone derivatives as p38 mitogen-activated protein kinase (MAPK) inhibitors. The X-ray crystal structure of 4-[4-(4-fluoro-phenyl)-2-methyl-5-oxo-2,5-dihydro-isoxazol-3-yl]-1-methyl-pyridinium iodide showed the presence of the regioisomer 4-[3-(4-fluoro-phenyl)-2-methyl-5-oxo-2,5-dihydro-isoxazol-4-yl]-1-methyl-pyridinium iodide. The synthesis of the former compound was achieved by reacting 4-(4-fluoro-phenyl)-3-(4-pyridyl)isoxazol-5(2H)-one after treatment with Et(3)N in dimethyl-formamide, with iodo-methane. The unexpected formation of the regioisomer could be explained by a rearrangement occurring via aziridine of the isoxazolone compound. The regioisomers have site occupancies of 0.632 (4)/0.368 (4). The two six members rings make a dihedral angle of 66.8 (2)°.Entities:
Year: 2007 PMID: 21200862 PMCID: PMC2915348 DOI: 10.1107/S1600536807055985
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H12FN2O2+·I– | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6868 reflections |
| θ = 2.7–28.3º | |
| µ = 2.05 mm−1 | |
| β = 96.8828 (14)º | Block, brown |
| 0.52 × 0.20 × 0.08 mm | |
| Bruker APEXII CCD diffractometer | 3369 reflections with |
| Monochromator: graphite | |
| θmax = 28.4º | |
| CCD scan | θmin = 2.0º |
| Absorption correction: multi-scan(APEX2; Bruker, 2006) | |
| 27681 measured reflections | |
| 3897 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 3897 reflections | Δρmax = 1.60 e Å−3 |
| 188 parameters | Δρmin = −0.51 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| F1A | 1.0107 (3) | 0.20467 (16) | 1.6192 (4) | 0.0292 (4) | 0.632 (4) |
| F1B | 0.3217 (5) | 0.1835 (3) | 0.8219 (7) | 0.0292 (4) | 0.368 (4) |
| C1 | 0.9450 (4) | 0.08719 (19) | 0.9398 (5) | 0.0327 (7) | |
| C2 | 0.8322 (4) | 0.07466 (19) | 0.8261 (5) | 0.0333 (7) | |
| N3 | 0.8565 (3) | 0.0373 (2) | 0.6894 (5) | 0.0458 (9) | |
| O4 | 0.9887 (3) | 0.02271 (16) | 0.7079 (4) | 0.0439 (7) | |
| C5 | 1.0475 (4) | 0.0546 (2) | 0.8619 (6) | 0.0384 (8) | |
| C6 | 0.7766 (4) | 0.0089 (2) | 0.5375 (6) | 0.0408 (9) | |
| H6A | 0.8320 | −0.0168 | 0.4667 | 0.061* | |
| H6B | 0.7337 | 0.0435 | 0.4623 | 0.061* | |
| H6C | 0.7100 | −0.0191 | 0.5806 | 0.061* | |
| O7 | 1.1646 (3) | 0.04901 (16) | 0.8994 (5) | 0.0489 (8) | |
| C8 | 0.9607 (4) | 0.12052 (18) | 1.1149 (5) | 0.0332 (8) | |
| C9 | 0.8538 (4) | 0.1315 (2) | 1.2097 (6) | 0.0359 (8) | |
| H9 | 0.7687 | 0.1187 | 1.1584 | 0.043* | |
| C10 | 0.8700 (4) | 0.1609 (2) | 1.3781 (6) | 0.0399 (9) | |
| H10 | 0.7969 | 0.1691 | 1.4412 | 0.048* | |
| C11A | 0.9937 (5) | 0.1776 (2) | 1.4501 (6) | 0.0462 (9) | 0.632 (4) |
| N11B | 0.9937 (5) | 0.1776 (2) | 1.4501 (6) | 0.0462 (9) | 0.368 (4) |
| H11B | 1.0046 | 0.1958 | 1.5571 | 0.055* | 0.368 (4) |
| C12 | 1.1020 (4) | 0.1672 (2) | 1.3625 (6) | 0.0458 (10) | |
| H12 | 1.1868 | 0.1795 | 1.4162 | 0.055* | |
| C13 | 1.0846 (4) | 0.1386 (2) | 1.1952 (6) | 0.0413 (9) | |
| H13 | 1.1586 | 0.1310 | 1.1333 | 0.050* | |
| C15 | 0.6988 (4) | 0.10094 (19) | 0.8287 (5) | 0.0312 (7) | |
| C16 | 0.5906 (4) | 0.06123 (19) | 0.8311 (5) | 0.0336 (7) | |
| H16 | 0.6003 | 0.0153 | 0.8348 | 0.040* | |
| C17 | 0.4681 (4) | 0.0892 (2) | 0.8282 (5) | 0.0352 (8) | |
| H17 | 0.3932 | 0.0623 | 0.8308 | 0.042* | |
| N18A | 0.4542 (3) | 0.15364 (17) | 0.8217 (4) | 0.0292 (4) | 0.632 (4) |
| H18A | 0.3753 | 0.1705 | 0.8193 | 0.035* | 0.632 (4) |
| C18B | 0.4542 (3) | 0.15364 (17) | 0.8217 (4) | 0.0292 (4) | 0.368 (4) |
| C19 | 0.5569 (4) | 0.1931 (2) | 0.8188 (6) | 0.0364 (8) | |
| H19 | 0.5441 | 0.2388 | 0.8156 | 0.044* | |
| C20 | 0.6822 (4) | 0.16808 (19) | 0.8204 (5) | 0.0354 (8) | |
| H20 | 0.7552 | 0.1961 | 0.8160 | 0.042* | |
| I1 | 0.47781 (2) | 0.126317 (12) | 0.31747 (3) | 0.03385 (11) |
| F1A | 0.0284 (10) | 0.0371 (11) | 0.0211 (9) | 0.0016 (8) | −0.0013 (7) | −0.0038 (8) |
| F1B | 0.0284 (10) | 0.0371 (11) | 0.0211 (9) | 0.0016 (8) | −0.0013 (7) | −0.0038 (8) |
| C1 | 0.0289 (17) | 0.0352 (19) | 0.0353 (18) | 0.0032 (14) | 0.0087 (14) | 0.0040 (14) |
| C2 | 0.0329 (18) | 0.0339 (19) | 0.0339 (18) | 0.0020 (14) | 0.0065 (14) | 0.0026 (14) |
| N3 | 0.0312 (17) | 0.061 (2) | 0.045 (2) | 0.0125 (16) | 0.0037 (15) | −0.0117 (17) |
| O4 | 0.0336 (14) | 0.0525 (18) | 0.0474 (17) | 0.0086 (13) | 0.0122 (12) | −0.0064 (14) |
| C5 | 0.0325 (19) | 0.038 (2) | 0.045 (2) | 0.0013 (16) | 0.0092 (16) | 0.0042 (16) |
| C6 | 0.040 (2) | 0.042 (2) | 0.042 (2) | 0.0019 (17) | 0.0108 (17) | −0.0077 (17) |
| O7 | 0.0292 (14) | 0.0528 (18) | 0.067 (2) | 0.0032 (12) | 0.0151 (14) | 0.0009 (16) |
| C8 | 0.0303 (18) | 0.0346 (19) | 0.0349 (19) | −0.0006 (14) | 0.0047 (15) | 0.0048 (14) |
| C9 | 0.0286 (17) | 0.046 (2) | 0.0336 (19) | 0.0007 (15) | 0.0036 (15) | 0.0009 (15) |
| C10 | 0.037 (2) | 0.048 (2) | 0.035 (2) | 0.0035 (17) | 0.0049 (16) | −0.0002 (17) |
| C11A | 0.055 (2) | 0.043 (2) | 0.039 (2) | −0.0025 (18) | −0.0002 (18) | 0.0000 (17) |
| N11B | 0.055 (2) | 0.043 (2) | 0.039 (2) | −0.0025 (18) | −0.0002 (18) | 0.0000 (17) |
| C12 | 0.037 (2) | 0.050 (3) | 0.048 (2) | −0.0095 (18) | −0.0029 (18) | 0.0029 (19) |
| C13 | 0.0297 (19) | 0.048 (2) | 0.047 (2) | −0.0043 (16) | 0.0057 (17) | 0.0058 (18) |
| C15 | 0.0331 (17) | 0.0352 (18) | 0.0257 (16) | 0.0025 (14) | 0.0045 (13) | −0.0009 (14) |
| C16 | 0.0372 (19) | 0.0332 (18) | 0.0313 (17) | −0.0009 (15) | 0.0079 (15) | −0.0007 (14) |
| C17 | 0.0360 (19) | 0.038 (2) | 0.0323 (18) | −0.0024 (15) | 0.0063 (15) | −0.0016 (14) |
| N18A | 0.0284 (10) | 0.0371 (11) | 0.0211 (9) | 0.0016 (8) | −0.0013 (7) | −0.0038 (8) |
| C18B | 0.0284 (10) | 0.0371 (11) | 0.0211 (9) | 0.0016 (8) | −0.0013 (7) | −0.0038 (8) |
| C19 | 0.0344 (18) | 0.0363 (19) | 0.0381 (19) | 0.0028 (15) | 0.0025 (15) | 0.0013 (15) |
| C20 | 0.0318 (18) | 0.0329 (19) | 0.041 (2) | −0.0005 (14) | 0.0037 (15) | −0.0014 (15) |
| I1 | 0.03172 (15) | 0.03684 (16) | 0.03268 (16) | −0.00256 (9) | 0.00260 (10) | −0.00114 (9) |
| F1A—C11A | 1.376 (5) | C10—C11A | 1.365 (6) |
| C1—C2 | 1.378 (5) | C10—H10 | 0.9500 |
| C1—C5 | 1.431 (5) | C11A—C12 | 1.375 (7) |
| C1—C8 | 1.472 (5) | C12—C13 | 1.378 (7) |
| C2—N3 | 1.328 (5) | C12—H12 | 0.9500 |
| C2—C15 | 1.477 (5) | C13—H13 | 0.9500 |
| N3—O4 | 1.383 (4) | C15—C16 | 1.383 (5) |
| N3—C6 | 1.444 (6) | C15—C20 | 1.393 (6) |
| O4—C5 | 1.400 (5) | C16—C17 | 1.382 (5) |
| C5—O7 | 1.208 (5) | C16—H16 | 0.9500 |
| C6—H6A | 0.9800 | C17—N18A | 1.336 (6) |
| C6—H6B | 0.9800 | C17—H17 | 0.9500 |
| C6—H6C | 0.9800 | N18A—C19 | 1.334 (5) |
| C8—C13 | 1.392 (6) | N18A—H18A | 0.8800 |
| C8—C9 | 1.397 (6) | C19—C20 | 1.386 (5) |
| C9—C10 | 1.390 (6) | C19—H19 | 0.9500 |
| C9—H9 | 0.9500 | C20—H20 | 0.9500 |
| C2—C1—C5 | 105.4 (3) | C10—C11A—C12 | 122.8 (4) |
| C2—C1—C8 | 129.2 (3) | C10—C11A—F1A | 118.4 (4) |
| C5—C1—C8 | 125.1 (4) | C12—C11A—F1A | 118.8 (4) |
| N3—C2—C1 | 111.3 (3) | C11A—C12—C13 | 118.5 (4) |
| N3—C2—C15 | 118.9 (3) | C11A—C12—H12 | 120.8 |
| C1—C2—C15 | 129.6 (4) | C13—C12—H12 | 120.8 |
| C2—N3—O4 | 108.8 (3) | C12—C13—C8 | 121.3 (4) |
| C2—N3—C6 | 134.4 (4) | C12—C13—H13 | 119.4 |
| O4—N3—C6 | 116.8 (3) | C8—C13—H13 | 119.4 |
| N3—O4—C5 | 107.6 (3) | C16—C15—C20 | 119.5 (3) |
| O7—C5—O4 | 117.8 (4) | C16—C15—C2 | 122.2 (4) |
| O7—C5—C1 | 135.3 (4) | C20—C15—C2 | 118.1 (3) |
| O4—C5—C1 | 106.9 (3) | C17—C16—C15 | 119.1 (4) |
| N3—C6—H6A | 109.5 | C17—C16—H16 | 120.4 |
| N3—C6—H6B | 109.5 | C15—C16—H16 | 120.4 |
| H6A—C6—H6B | 109.5 | N18A—C17—C16 | 120.5 (4) |
| N3—C6—H6C | 109.5 | N18A—C17—H17 | 119.7 |
| H6A—C6—H6C | 109.5 | C16—C17—H17 | 119.7 |
| H6B—C6—H6C | 109.5 | C19—N18A—C17 | 121.6 (3) |
| C13—C8—C9 | 118.2 (4) | C19—N18A—H18A | 119.2 |
| C13—C8—C1 | 120.4 (4) | C17—N18A—H18A | 119.2 |
| C9—C8—C1 | 121.3 (4) | N18A—C19—C20 | 120.7 (4) |
| C10—C9—C8 | 121.1 (4) | N18A—C19—H19 | 119.6 |
| C10—C9—H9 | 119.5 | C20—C19—H19 | 119.6 |
| C8—C9—H9 | 119.5 | C19—C20—C15 | 118.5 (4) |
| C11A—C10—C9 | 118.2 (4) | C19—C20—H20 | 120.7 |
| C11A—C10—H10 | 120.9 | C15—C20—H20 | 120.7 |
| C9—C10—H10 | 120.9 | ||
| C5—C1—C2—N3 | 0.7 (5) | C1—C8—C9—C10 | 177.6 (4) |
| C8—C1—C2—N3 | −173.3 (4) | C8—C9—C10—C11A | −1.2 (6) |
| C5—C1—C2—C15 | −173.3 (4) | C9—C10—C11A—C12 | 0.7 (7) |
| C8—C1—C2—C15 | 12.7 (7) | C9—C10—C11A—F1A | −177.8 (4) |
| C1—C2—N3—O4 | 0.6 (5) | C10—C11A—C12—C13 | −0.1 (7) |
| C15—C2—N3—O4 | 175.3 (3) | F1A—C11A—C12—C13 | 178.4 (4) |
| C1—C2—N3—C6 | 178.3 (5) | C11A—C12—C13—C8 | 0.2 (7) |
| C15—C2—N3—C6 | −7.0 (8) | C9—C8—C13—C12 | −0.7 (6) |
| C2—N3—O4—C5 | −1.7 (5) | C1—C8—C13—C12 | −177.1 (4) |
| C6—N3—O4—C5 | −179.9 (4) | N3—C2—C15—C16 | 60.6 (5) |
| N3—O4—C5—O7 | −178.4 (4) | C1—C2—C15—C16 | −125.8 (5) |
| N3—O4—C5—C1 | 2.1 (4) | N3—C2—C15—C20 | −116.6 (4) |
| C2—C1—C5—O7 | 178.9 (5) | C1—C2—C15—C20 | 57.0 (6) |
| C8—C1—C5—O7 | −6.8 (8) | C20—C15—C16—C17 | −1.0 (5) |
| C2—C1—C5—O4 | −1.7 (4) | C2—C15—C16—C17 | −178.1 (3) |
| C8—C1—C5—O4 | 172.6 (3) | C15—C16—C17—N18A | 0.5 (5) |
| C2—C1—C8—C13 | −168.6 (4) | C16—C17—N18A—C19 | −0.4 (5) |
| C5—C1—C8—C13 | 18.5 (6) | C17—N18A—C19—C20 | 0.7 (6) |
| C2—C1—C8—C9 | 15.1 (6) | N18A—C19—C20—C15 | −1.2 (6) |
| C5—C1—C8—C9 | −157.8 (4) | C16—C15—C20—C19 | 1.4 (6) |
| C13—C8—C9—C10 | 1.3 (6) | C2—C15—C20—C19 | 178.6 (4) |