Literature DB >> 21200851

5-Hydr-oxy-7-meth-oxy-4H-chromen-4-one.

Iván Brito, Jorge Bórquez, Luis Alberto Loyola, Matías López-Rodríguez.   

Abstract

The mol-ecular conformation of the title compound, C(10)H(8)O(4), isolated from Laretia acualis, is stabilized by a strong intra-molecular hydrogen bond between the hydroxyl and carbonyl groups. The crystal packing shows π-π stacking inter-actions. The chromene (4H-1-benzopyran-4-one) unit is essentially planar.

Entities:  

Year:  2007        PMID: 21200851      PMCID: PMC2915337          DOI: 10.1107/S1600536807066494

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Gabor (1988 ▶); Valenti et al. (1993 ▶, 1998 ▶); Vasconcelos et al. (1998 ▶); Bernstein et al. (1995 ▶); Wickens (1995 ▶); Wallet & Cody (1995 ▶).

Experimental

Crystal data

C10H8O4 M = 192.16 Monoclinic, a = 9.7551 (3) Å b = 11.7512 (9) Å c = 7.5211 (7) Å β = 95.094 (4)° V = 858.77 (11) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 298 (2) K 0.19 × 0.10 × 0.08 mm

Data collection

Nonius KappaCCD area-detector diffractometer Absorption correction: none 1504 measured reflections 1504 independent reflections 1393 reflections with I > 2σ(I)

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.115 S = 1.08 1504 reflections 131 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.17 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: DENZO–SMN (Otwinowski & Minor, 1997 ▶); data reduction: DENZO–SMN; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807066494/bt2661sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807066494/bt2661Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H8O4F000 = 400
Mr = 192.16Dx = 1.486 Mg m3
Monoclinic, P21/cMelting point: 374 K
Hall symbol: -P 2ybcMo Kα radiation λ = 0.71073 Å
a = 9.7551 (3) ÅCell parameters from 1504 reflections
b = 11.7512 (9) Åθ = 3.0–25.0º
c = 7.5211 (7) ŵ = 0.12 mm1
β = 95.094 (4)ºT = 298 (2) K
V = 858.77 (11) Å3Prismatic, colourless
Z = 40.19 × 0.10 × 0.08 mm
Nonius KappaCCD area-detector diffractometer1393 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0
Monochromator: graphiteθmax = 25.3º
φ scans, and ω scans with κ offsetsθmin = 3.2º
Absorption correction: noneh = −11→11
1504 measured reflectionsk = −14→0
1504 independent reflectionsl = 0→9
Refinement on F2H atoms treated by a mixture of independent and constrained refinement
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.06P)2 + 0.1521P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.041(Δ/σ)max < 0.001
wR(F2) = 0.115Δρmax = 0.15 e Å3
S = 1.08Δρmin = −0.17 e Å3
1504 reflectionsExtinction correction: none
131 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.70907 (10)0.05272 (8)0.30079 (14)0.0533 (3)
O20.96609 (11)0.31131 (10)0.18700 (17)0.0649 (4)
O30.77689 (13)0.45485 (9)0.25771 (16)0.0629 (4)
H90.855 (3)0.422 (2)0.219 (3)0.098 (7)*
O40.36201 (10)0.31332 (9)0.43512 (14)0.0558 (3)
C10.27108 (16)0.22189 (16)0.4674 (2)0.0633 (5)
H1A0.18560.25210.50060.095*
H1B0.31210.1750.56220.095*
H1C0.25440.1770.36090.095*
C20.83521 (16)0.03322 (13)0.2464 (2)0.0586 (4)
H20.8626−0.0420.2350.07*
C30.92292 (15)0.11442 (14)0.2080 (2)0.0568 (4)
H31.00840.09460.17150.068*
C40.88700 (14)0.23206 (12)0.22245 (19)0.0460 (4)
C4A0.75193 (13)0.25315 (10)0.27872 (16)0.0384 (3)
C50.69920 (14)0.36468 (11)0.29717 (17)0.0427 (3)
C60.57034 (15)0.38106 (12)0.35134 (17)0.0460 (4)
H60.53720.45450.36450.055*
C70.48861 (13)0.28748 (12)0.38688 (16)0.0419 (3)
C80.53533 (13)0.17729 (11)0.37016 (17)0.0419 (3)
H80.48080.11520.3940.05*
C8A0.66641 (13)0.16281 (11)0.31662 (17)0.0391 (3)
U11U22U33U12U13U23
O10.0439 (6)0.0339 (5)0.0831 (7)0.0016 (4)0.0111 (5)−0.0009 (4)
O20.0439 (6)0.0602 (7)0.0922 (8)−0.0118 (5)0.0150 (5)0.0044 (6)
O30.0628 (8)0.0378 (6)0.0895 (8)−0.0086 (5)0.0146 (6)0.0063 (5)
O40.0431 (6)0.0615 (7)0.0646 (6)0.0096 (5)0.0145 (5)−0.0015 (5)
C10.0409 (8)0.0829 (12)0.0677 (10)−0.0004 (8)0.0138 (7)0.0061 (8)
C20.0456 (8)0.0432 (8)0.0876 (11)0.0098 (6)0.0105 (7)−0.0038 (7)
C30.0376 (8)0.0554 (9)0.0779 (10)0.0068 (7)0.0087 (7)−0.0033 (7)
C40.0357 (7)0.0483 (8)0.0536 (8)−0.0036 (6)0.0015 (5)0.0015 (6)
C4A0.0353 (7)0.0387 (7)0.0405 (6)−0.0017 (5)−0.0012 (5)0.0006 (5)
C50.0458 (8)0.0357 (7)0.0458 (7)−0.0036 (6)0.0001 (5)0.0023 (5)
C60.0501 (8)0.0372 (7)0.0502 (7)0.0085 (6)0.0026 (6)−0.0011 (5)
C70.0376 (7)0.0504 (8)0.0374 (6)0.0040 (6)0.0020 (5)−0.0012 (5)
C80.0380 (7)0.0408 (7)0.0470 (7)−0.0039 (5)0.0043 (5)0.0015 (5)
C8A0.0377 (7)0.0347 (7)0.0443 (7)0.0007 (5)0.0002 (5)−0.0007 (5)
O1—C21.3503 (18)C3—C41.433 (2)
O1—C8A1.3674 (15)C3—H30.93
O2—C41.2531 (17)C4—C4A1.4407 (19)
O3—C51.3510 (16)C4A—C8A1.3952 (18)
O3—H90.92 (2)C4A—C51.4192 (18)
O4—C71.3522 (16)C5—C61.369 (2)
O4—C11.428 (2)C6—C71.398 (2)
C1—H1A0.96C6—H60.93
C1—H1B0.96C7—C81.3821 (19)
C1—H1C0.96C8—C8A1.3848 (18)
C2—C31.330 (2)C8—H80.93
C2—H20.93
C2—O1—C8A118.65 (11)C8A—C4A—C5117.02 (12)
C5—O3—H9103.8 (15)C8A—C4A—C4120.54 (12)
C7—O4—C1118.20 (12)C5—C4A—C4122.44 (12)
O4—C1—H1A109.5O3—C5—C6120.20 (12)
O4—C1—H1B109.5O3—C5—C4A119.18 (13)
H1A—C1—H1B109.5C6—C5—C4A120.62 (12)
O4—C1—H1C109.5C5—C6—C7120.04 (12)
H1A—C1—H1C109.5C5—C6—H6120
H1B—C1—H1C109.5C7—C6—H6120
C3—C2—O1124.40 (14)O4—C7—C8123.45 (13)
C3—C2—H2117.8O4—C7—C6115.13 (12)
O1—C2—H2117.8C8—C7—C6121.42 (12)
C2—C3—C4120.62 (14)C7—C8—C8A117.52 (12)
C2—C3—H3119.7C7—C8—H8121.2
C4—C3—H3119.7C8A—C8—H8121.2
O2—C4—C3122.79 (13)O1—C8A—C8115.95 (11)
O2—C4—C4A122.08 (13)O1—C8A—C4A120.66 (12)
C3—C4—C4A115.12 (12)C8—C8A—C4A123.38 (12)
C8A—O1—C2—C30.7 (2)C1—O4—C7—C8−1.15 (18)
O1—C2—C3—C4−0.1 (3)C1—O4—C7—C6177.84 (12)
C2—C3—C4—O2−179.70 (15)C5—C6—C7—O4−178.42 (11)
C2—C3—C4—C4A−0.5 (2)C5—C6—C7—C80.6 (2)
O2—C4—C4A—C8A179.81 (12)O4—C7—C8—C8A178.87 (11)
C3—C4—C4A—C8A0.59 (19)C6—C7—C8—C8A−0.05 (19)
O2—C4—C4A—C50.2 (2)C2—O1—C8A—C8179.00 (12)
C3—C4—C4A—C5−178.99 (12)C2—O1—C8A—C4A−0.52 (19)
C8A—C4A—C5—O3−178.38 (11)C7—C8—C8A—O1−179.75 (11)
C4—C4A—C5—O31.2 (2)C7—C8—C8A—C4A−0.24 (19)
C8A—C4A—C5—C60.52 (19)C5—C4A—C8A—O1179.50 (10)
C4—C4A—C5—C6−179.88 (11)C4—C4A—C8A—O1−0.11 (19)
O3—C5—C6—C7178.07 (11)C5—C4A—C8A—C80.02 (19)
C4A—C5—C6—C7−0.8 (2)C4—C4A—C8A—C8−179.59 (11)
D—H···AD—HH···AD···AD—H···A
O3—H9···O20.92 (3)1.72 (3)2.5901 (17)155 (2)
CgICgJCgI···CgJDihedral angleInterplanar distanceOffset
Cg1Cg2i3.6661 (8)1.393.5081.13
Cg2Cg1ii3.6660 (8)1.393.4871.06
Cg2Cg2i3.7930 (8)1.693.4711.50
Cg2Cg2ii3.7931 (8)1.693.4861.53
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H9⋯O20.92 (3)1.72 (3)2.5901 (17)155 (2)
Table 2

π–π interactions (Å,°)

Cg1 and Cg2 are the centroids of rings O1/C2–C4/C4A–C8A and C4A/C5–C8/C8A, respectively. The offset is defined as the distance between CgI and the perpendicular projection of CgJ on ring I.

CgICgJCgICgJDihedral angleInterplanar distanceOffset
Cg1Cg2i3.6661 (8)1.393.511.13
Cg2Cg1ii3.6660 (8)1.393.491.06
Cg2Cg2i3.7930 (8)1.693.471.50
Cg2Cg2ii3.7931 (8)1.693.491.53

Symmetry codes: (i) ; (ii) .

  3 in total

1.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

2.  Benzo-gamma-pyrone analogues of geiparvarin: synthesis and biological evaluation against B16 melanoma cells.

Authors:  P Valenti; P Da Re; A Rampa; P Montanari; M Carrara; L Cima
Journal:  Anticancer Drug Des       Date:  1993-10

3.  Synthesis of flavone-2'-carboxylic acid analogues as potential antitumor agents.

Authors:  P Valenti; A Bisi; A Rampa; S Gobbi; F Belluti; P Da Re; L Cima; M Carrara
Journal:  Anticancer Drug Des       Date:  1998-12
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.