| Literature DB >> 21200850 |
Ghulam Qadeer, Nasim Hasan Rama, Javeed Akhtar, Mohammad Azad Malik, Madeleine Helliwell.
Abstract
The title compound, C(20)H(23)N(3)O(4)S, is an important biologically active heterocyclic compound. The five-membered ring is oriented with respect to the six-membered rings at dihedral angles of 78.60 (3) (trimethoxyphenyl ring) and 71.57 (3)° (methoxyphenyl ring). In the crystal structure, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into infinite chains along the c axis.Entities:
Year: 2007 PMID: 21200850 PMCID: PMC2924210 DOI: 10.1107/S1600536807066433
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H23N3O4S | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 491(1) K |
| Mo | |
| Cell parameters from 5348 reflections | |
| θ = 2.4–26.4° | |
| α = 91.733 (1)° | µ = 0.19 mm−1 |
| β = 92.955 (1)° | |
| γ = 104.075 (1)° | Rectangular, colourless |
| 0.55 × 0.35 × 0.30 mm |
| Bruker SMART CCD area-detector diffractometer | 4149 independent reflections |
| Radiation source: fine-focus sealed tube | 3689 reflections with |
| graphite | |
| ω and φ scans | θmax = 26.4°, θmin = 1.8° |
| Absorption correction: integration ( | |
| 8266 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4149 reflections | (Δ/σ)max = 0.001 |
| 261 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 1.22156 (4) | 0.29397 (4) | 1.24108 (3) | 0.02234 (11) | |
| O1 | 0.73558 (18) | 0.35378 (12) | 0.44984 (10) | 0.0440 (3) | |
| O2 | 0.73876 (11) | 0.15824 (11) | 0.30066 (8) | 0.0224 (2) | |
| O3 | 0.76675 (13) | −0.07402 (10) | 0.37013 (8) | 0.0262 (2) | |
| O4 | 1.16300 (12) | 0.44582 (10) | 0.89915 (9) | 0.0260 (2) | |
| N1 | 0.87413 (14) | 0.11839 (12) | 1.02120 (9) | 0.0201 (3) | |
| N2 | 0.94616 (14) | 0.15655 (12) | 1.12957 (10) | 0.0193 (2) | |
| H2N | 0.8869 (19) | 0.1498 (17) | 1.1889 (15) | 0.022 (4)* | |
| N3 | 1.12777 (13) | 0.22471 (11) | 1.01432 (9) | 0.0177 (2) | |
| C1 | 0.98802 (16) | 0.16129 (14) | 0.95339 (11) | 0.0187 (3) | |
| C2 | 1.09805 (17) | 0.22420 (14) | 1.12896 (11) | 0.0185 (3) | |
| C3 | 0.97520 (16) | 0.15040 (14) | 0.82582 (11) | 0.0210 (3) | |
| H3A | 1.0517 | 0.1012 | 0.7992 | 0.025* | |
| H3B | 1.0058 | 0.2393 | 0.7958 | 0.025* | |
| C4 | 0.80733 (17) | 0.08197 (15) | 0.77691 (11) | 0.0213 (3) | |
| H4A | 0.7863 | −0.0128 | 0.7904 | 0.026* | |
| H4B | 0.7277 | 0.1174 | 0.8169 | 0.026* | |
| C5 | 0.78916 (16) | 0.10143 (14) | 0.64979 (11) | 0.0198 (3) | |
| C6 | 0.77190 (19) | 0.22128 (15) | 0.61242 (12) | 0.0268 (3) | |
| H6 | 0.7712 | 0.2900 | 0.6667 | 0.032* | |
| C7 | 0.75566 (19) | 0.24094 (16) | 0.49577 (13) | 0.0267 (3) | |
| C8 | 0.75539 (16) | 0.13938 (14) | 0.41670 (11) | 0.0201 (3) | |
| C9 | 0.77218 (16) | 0.01948 (14) | 0.45455 (11) | 0.0193 (3) | |
| C10 | 0.79036 (16) | 0.00040 (14) | 0.57146 (12) | 0.0199 (3) | |
| H10 | 0.8035 | −0.0812 | 0.5972 | 0.024* | |
| C11 | 0.7409 (4) | 0.4614 (2) | 0.52929 (18) | 0.0692 (8) | |
| H11A | 0.6571 | 0.4357 | 0.5834 | 0.104* | |
| H11B | 0.7236 | 0.5364 | 0.4873 | 0.104* | |
| H11C | 0.8457 | 0.4857 | 0.5714 | 0.104* | |
| C12 | 0.57722 (19) | 0.1091 (2) | 0.25334 (14) | 0.0394 (4) | |
| H12A | 0.5360 | 0.0190 | 0.2762 | 0.059* | |
| H12B | 0.5757 | 0.1105 | 0.1695 | 0.059* | |
| H12C | 0.5100 | 0.1642 | 0.2820 | 0.059* | |
| C13 | 0.7628 (2) | −0.20286 (16) | 0.40713 (14) | 0.0354 (4) | |
| H13A | 0.8643 | −0.2026 | 0.4488 | 0.053* | |
| H13B | 0.7465 | −0.2639 | 0.3403 | 0.053* | |
| H13C | 0.6748 | −0.2303 | 0.4577 | 0.053* | |
| C14 | 1.27708 (16) | 0.28093 (14) | 0.96606 (11) | 0.0185 (3) | |
| C15 | 1.29400 (17) | 0.39505 (14) | 0.90645 (11) | 0.0207 (3) | |
| C16 | 1.43893 (18) | 0.44820 (15) | 0.85927 (12) | 0.0258 (3) | |
| H16 | 1.4522 | 0.5250 | 0.8167 | 0.031* | |
| C17 | 1.56401 (18) | 0.38788 (17) | 0.87504 (13) | 0.0302 (4) | |
| H17 | 1.6636 | 0.4252 | 0.8440 | 0.036* | |
| C18 | 1.54665 (18) | 0.27456 (17) | 0.93495 (13) | 0.0294 (3) | |
| H18 | 1.6336 | 0.2347 | 0.9453 | 0.035* | |
| C19 | 1.40069 (17) | 0.21988 (15) | 0.97969 (12) | 0.0237 (3) | |
| H19 | 1.3861 | 0.1409 | 1.0194 | 0.028* | |
| C20 | 1.1700 (2) | 0.55440 (16) | 0.82719 (16) | 0.0380 (4) | |
| H20A | 1.2536 | 0.6296 | 0.8585 | 0.057* | |
| H20B | 1.0666 | 0.5774 | 0.8240 | 0.057* | |
| H20C | 1.1947 | 0.5305 | 0.7498 | 0.057* |
| S1 | 0.02592 (19) | 0.0233 (2) | 0.01559 (18) | 0.00255 (14) | −0.00210 (13) | 0.00064 (13) |
| O1 | 0.0882 (10) | 0.0284 (7) | 0.0253 (6) | 0.0323 (7) | 0.0050 (6) | 0.0065 (5) |
| O2 | 0.0211 (5) | 0.0317 (6) | 0.0138 (5) | 0.0047 (4) | 0.0009 (4) | 0.0054 (4) |
| O3 | 0.0389 (6) | 0.0217 (6) | 0.0171 (5) | 0.0057 (5) | 0.0037 (4) | −0.0024 (4) |
| O4 | 0.0298 (5) | 0.0184 (5) | 0.0309 (6) | 0.0082 (4) | −0.0018 (4) | 0.0057 (4) |
| N1 | 0.0227 (6) | 0.0228 (6) | 0.0144 (5) | 0.0052 (5) | −0.0009 (4) | 0.0003 (5) |
| N2 | 0.0222 (6) | 0.0225 (6) | 0.0127 (5) | 0.0041 (5) | 0.0015 (5) | 0.0018 (5) |
| N3 | 0.0208 (6) | 0.0175 (6) | 0.0142 (5) | 0.0037 (5) | 0.0006 (4) | 0.0023 (4) |
| C1 | 0.0221 (7) | 0.0161 (7) | 0.0176 (7) | 0.0044 (5) | −0.0002 (5) | 0.0017 (5) |
| C2 | 0.0246 (7) | 0.0165 (7) | 0.0161 (6) | 0.0077 (5) | 0.0013 (5) | 0.0033 (5) |
| C3 | 0.0243 (7) | 0.0221 (7) | 0.0159 (6) | 0.0042 (6) | 0.0014 (5) | 0.0018 (5) |
| C4 | 0.0248 (7) | 0.0220 (7) | 0.0160 (6) | 0.0037 (6) | 0.0008 (5) | 0.0010 (5) |
| C5 | 0.0194 (7) | 0.0230 (7) | 0.0161 (6) | 0.0037 (5) | 0.0004 (5) | 0.0012 (5) |
| C6 | 0.0397 (9) | 0.0234 (8) | 0.0189 (7) | 0.0115 (7) | 0.0018 (6) | −0.0031 (6) |
| C7 | 0.0382 (8) | 0.0227 (8) | 0.0226 (7) | 0.0131 (6) | 0.0026 (6) | 0.0051 (6) |
| C8 | 0.0208 (7) | 0.0267 (8) | 0.0134 (6) | 0.0068 (6) | 0.0013 (5) | 0.0031 (5) |
| C9 | 0.0193 (6) | 0.0211 (7) | 0.0165 (6) | 0.0031 (5) | 0.0023 (5) | −0.0021 (5) |
| C10 | 0.0225 (7) | 0.0186 (7) | 0.0183 (7) | 0.0044 (5) | 0.0008 (5) | 0.0023 (5) |
| C11 | 0.152 (3) | 0.0320 (11) | 0.0399 (11) | 0.0512 (15) | 0.0137 (13) | 0.0079 (9) |
| C12 | 0.0228 (8) | 0.0672 (13) | 0.0262 (8) | 0.0064 (8) | −0.0028 (6) | 0.0151 (8) |
| C13 | 0.0555 (11) | 0.0198 (8) | 0.0284 (8) | 0.0029 (7) | 0.0116 (7) | −0.0035 (6) |
| C14 | 0.0196 (6) | 0.0197 (7) | 0.0151 (6) | 0.0027 (5) | 0.0008 (5) | −0.0015 (5) |
| C15 | 0.0243 (7) | 0.0188 (7) | 0.0175 (6) | 0.0032 (6) | −0.0008 (5) | −0.0016 (5) |
| C16 | 0.0319 (8) | 0.0233 (8) | 0.0178 (7) | −0.0023 (6) | 0.0035 (6) | 0.0003 (6) |
| C17 | 0.0237 (7) | 0.0374 (9) | 0.0245 (7) | −0.0022 (6) | 0.0072 (6) | −0.0076 (7) |
| C18 | 0.0233 (7) | 0.0361 (9) | 0.0300 (8) | 0.0113 (7) | 0.0006 (6) | −0.0083 (7) |
| C19 | 0.0280 (7) | 0.0219 (8) | 0.0218 (7) | 0.0084 (6) | −0.0006 (6) | −0.0015 (6) |
| C20 | 0.0477 (10) | 0.0211 (8) | 0.0438 (10) | 0.0067 (7) | −0.0093 (8) | 0.0116 (7) |
| S1—C2 | 1.6775 (14) | C7—C8 | 1.393 (2) |
| O1—C7 | 1.3650 (18) | C8—C9 | 1.390 (2) |
| O1—C11 | 1.435 (2) | C9—C10 | 1.3944 (19) |
| O2—C8 | 1.3826 (15) | C10—H10 | 0.9500 |
| O2—C12 | 1.4397 (18) | C11—H11A | 0.9800 |
| O3—C9 | 1.3647 (17) | C11—H11B | 0.9800 |
| O3—C13 | 1.4309 (19) | C11—H11C | 0.9800 |
| O4—C15 | 1.3642 (17) | C12—H12A | 0.9800 |
| O4—C20 | 1.4324 (18) | C12—H12B | 0.9800 |
| N1—C1 | 1.2987 (19) | C12—H12C | 0.9800 |
| N1—N2 | 1.3861 (15) | C13—H13A | 0.9800 |
| N2—C2 | 1.3326 (19) | C13—H13B | 0.9800 |
| N2—H2N | 0.878 (17) | C13—H13C | 0.9800 |
| N3—C2 | 1.3778 (17) | C14—C19 | 1.3792 (19) |
| N3—C1 | 1.3789 (18) | C14—C15 | 1.389 (2) |
| N3—C14 | 1.4340 (18) | C15—C16 | 1.391 (2) |
| C1—C3 | 1.4892 (18) | C16—C17 | 1.388 (2) |
| C3—C4 | 1.5266 (19) | C16—H16 | 0.9500 |
| C3—H3A | 0.9900 | C17—C18 | 1.384 (2) |
| C3—H3B | 0.9900 | C17—H17 | 0.9500 |
| C4—C5 | 1.5122 (18) | C18—C19 | 1.389 (2) |
| C4—H4A | 0.9900 | C18—H18 | 0.9500 |
| C4—H4B | 0.9900 | C19—H19 | 0.9500 |
| C5—C10 | 1.3859 (19) | C20—H20A | 0.9800 |
| C5—C6 | 1.389 (2) | C20—H20B | 0.9800 |
| C6—C7 | 1.391 (2) | C20—H20C | 0.9800 |
| C6—H6 | 0.9500 | ||
| C7—O1—C11 | 116.44 (13) | C5—C10—H10 | 120.3 |
| C8—O2—C12 | 113.01 (11) | C9—C10—H10 | 120.3 |
| C9—O3—C13 | 116.17 (11) | O1—C11—H11A | 109.5 |
| C15—O4—C20 | 117.11 (12) | O1—C11—H11B | 109.5 |
| C1—N1—N2 | 103.56 (11) | H11A—C11—H11B | 109.5 |
| C2—N2—N1 | 113.78 (11) | O1—C11—H11C | 109.5 |
| C2—N2—H2N | 125.4 (11) | H11A—C11—H11C | 109.5 |
| N1—N2—H2N | 119.5 (11) | H11B—C11—H11C | 109.5 |
| C2—N3—C1 | 107.91 (12) | O2—C12—H12A | 109.5 |
| C2—N3—C14 | 126.41 (11) | O2—C12—H12B | 109.5 |
| C1—N3—C14 | 125.68 (11) | H12A—C12—H12B | 109.5 |
| N1—C1—N3 | 111.33 (12) | O2—C12—H12C | 109.5 |
| N1—C1—C3 | 126.51 (12) | H12A—C12—H12C | 109.5 |
| N3—C1—C3 | 122.13 (12) | H12B—C12—H12C | 109.5 |
| N2—C2—N3 | 103.34 (11) | O3—C13—H13A | 109.5 |
| N2—C2—S1 | 128.07 (11) | O3—C13—H13B | 109.5 |
| N3—C2—S1 | 128.58 (11) | H13A—C13—H13B | 109.5 |
| C1—C3—C4 | 112.98 (12) | O3—C13—H13C | 109.5 |
| C1—C3—H3A | 109.0 | H13A—C13—H13C | 109.5 |
| C4—C3—H3A | 109.0 | H13B—C13—H13C | 109.5 |
| C1—C3—H3B | 109.0 | C19—C14—C15 | 121.49 (13) |
| C4—C3—H3B | 109.0 | C19—C14—N3 | 119.04 (13) |
| H3A—C3—H3B | 107.8 | C15—C14—N3 | 119.47 (12) |
| C5—C4—C3 | 111.07 (12) | O4—C15—C14 | 115.78 (12) |
| C5—C4—H4A | 109.4 | O4—C15—C16 | 125.22 (13) |
| C3—C4—H4A | 109.4 | C14—C15—C16 | 118.99 (13) |
| C5—C4—H4B | 109.4 | C17—C16—C15 | 119.34 (14) |
| C3—C4—H4B | 109.4 | C17—C16—H16 | 120.3 |
| H4A—C4—H4B | 108.0 | C15—C16—H16 | 120.3 |
| C10—C5—C6 | 120.43 (13) | C18—C17—C16 | 121.38 (14) |
| C10—C5—C4 | 120.11 (13) | C18—C17—H17 | 119.3 |
| C6—C5—C4 | 119.45 (12) | C16—C17—H17 | 119.3 |
| C5—C6—C7 | 120.17 (13) | C17—C18—C19 | 119.21 (14) |
| C5—C6—H6 | 119.9 | C17—C18—H18 | 120.4 |
| C7—C6—H6 | 119.9 | C19—C18—H18 | 120.4 |
| O1—C7—C6 | 125.01 (14) | C14—C19—C18 | 119.55 (14) |
| O1—C7—C8 | 115.33 (13) | C14—C19—H19 | 120.2 |
| C6—C7—C8 | 119.65 (14) | C18—C19—H19 | 120.2 |
| O2—C8—C9 | 120.15 (12) | O4—C20—H20A | 109.5 |
| O2—C8—C7 | 119.89 (13) | O4—C20—H20B | 109.5 |
| C9—C8—C7 | 119.96 (12) | H20A—C20—H20B | 109.5 |
| O3—C9—C8 | 115.17 (12) | O4—C20—H20C | 109.5 |
| O3—C9—C10 | 124.48 (13) | H20A—C20—H20C | 109.5 |
| C8—C9—C10 | 120.34 (13) | H20B—C20—H20C | 109.5 |
| C5—C10—C9 | 119.45 (13) | ||
| C1—N1—N2—C2 | 1.85 (15) | C6—C7—C8—C9 | −0.4 (2) |
| N2—N1—C1—N3 | −0.12 (15) | C13—O3—C9—C8 | −172.13 (13) |
| N2—N1—C1—C3 | −178.15 (13) | C13—O3—C9—C10 | 6.8 (2) |
| C2—N3—C1—N1 | −1.52 (16) | O2—C8—C9—O3 | −1.54 (19) |
| C14—N3—C1—N1 | 178.47 (12) | C7—C8—C9—O3 | 178.61 (13) |
| C2—N3—C1—C3 | 176.61 (12) | O2—C8—C9—C10 | 179.45 (12) |
| C14—N3—C1—C3 | −3.4 (2) | C7—C8—C9—C10 | −0.4 (2) |
| N1—N2—C2—N3 | −2.71 (15) | C6—C5—C10—C9 | −0.7 (2) |
| N1—N2—C2—S1 | 176.30 (10) | C4—C5—C10—C9 | 179.49 (12) |
| C1—N3—C2—N2 | 2.48 (14) | O3—C9—C10—C5 | −177.96 (13) |
| C14—N3—C2—N2 | −177.52 (12) | C8—C9—C10—C5 | 1.0 (2) |
| C1—N3—C2—S1 | −176.53 (11) | C2—N3—C14—C19 | 72.32 (18) |
| C14—N3—C2—S1 | 3.5 (2) | C1—N3—C14—C19 | −107.68 (15) |
| N1—C1—C3—C4 | 0.6 (2) | C2—N3—C14—C15 | −107.91 (15) |
| N3—C1—C3—C4 | −177.23 (12) | C1—N3—C14—C15 | 72.09 (18) |
| C1—C3—C4—C5 | 166.39 (11) | C20—O4—C15—C14 | −172.91 (13) |
| C3—C4—C5—C10 | 104.08 (15) | C20—O4—C15—C16 | 6.9 (2) |
| C3—C4—C5—C6 | −75.69 (17) | C19—C14—C15—O4 | −179.94 (12) |
| C10—C5—C6—C7 | 0.0 (2) | N3—C14—C15—O4 | 0.29 (18) |
| C4—C5—C6—C7 | 179.76 (14) | C19—C14—C15—C16 | 0.2 (2) |
| C11—O1—C7—C6 | 3.6 (3) | N3—C14—C15—C16 | −179.52 (12) |
| C11—O1—C7—C8 | −177.92 (19) | O4—C15—C16—C17 | 178.73 (13) |
| C5—C6—C7—O1 | 178.94 (15) | C14—C15—C16—C17 | −1.5 (2) |
| C5—C6—C7—C8 | 0.6 (2) | C15—C16—C17—C18 | 1.2 (2) |
| C12—O2—C8—C9 | 82.37 (17) | C16—C17—C18—C19 | 0.3 (2) |
| C12—O2—C8—C7 | −97.78 (17) | C15—C14—C19—C18 | 1.3 (2) |
| O1—C7—C8—O2 | 1.3 (2) | N3—C14—C19—C18 | −178.96 (12) |
| C6—C7—C8—O2 | 179.79 (13) | C17—C18—C19—C14 | −1.5 (2) |
| O1—C7—C8—C9 | −178.88 (14) |
| H··· | ||||
| N2—H2N···O2i | 0.878 (17) | 1.890 (18) | 2.7558 (15) | 168.4 (15) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2N⋯O2i | 0.878 (17) | 1.890 (18) | 2.7558 (15) | 168.4 (15) |
Symmetry code: (i) .