| Literature DB >> 21200790 |
Abstract
A redetermination of the crystal structure of the title compound, C(6)H(16)N(2) (2+)·2Cl(-), was undertaken. All atomic coordinates including those of the H atoms were refined freely. The cation is located on a centre of symmetry. Important for the crystal structure are wavy hydrogen-bonded layers that are formed by ammonium groups and chloride anions, giving hydrogen-bonded rings.Entities:
Year: 2007 PMID: 21200790 PMCID: PMC2915284 DOI: 10.1107/S1600536807064793
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H16N22+·2Cl– | |
| Monoclinic, | Mo |
| Cell parameters from 1610 reflections | |
| θ = 4.8–17.4º | |
| µ = 0.60 mm−1 | |
| β = 99.824 (18)º | |
| Block, colourless | |
| 0.30 × 0.24 × 0.20 mm |
| Stoe STADI CCD diffractometer | 1562 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 32.5º |
| θmin = 4.3º | |
| ω scans | |
| Absorption correction: none | |
| 13502 measured reflections | |
| 1766 independent reflections |
| Refinement on | Hydrogen site location: difference Fourier map |
| Least-squares matrix: full | All H-atom parameters refined |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.41 e Å−3 | |
| 1766 reflections | Δρmin = −0.28 e Å−3 |
| 79 parameters | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.174 (6) |
| Secondary atom site location: difference Fourier map |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.46825 (6) | 0.15413 (2) | 0.46296 (5) | 0.03915 (12) | |
| N1 | 0.5260 (2) | 0.34260 (8) | 0.24820 (19) | 0.0338 (2) | |
| H1 | 0.522 (3) | 0.2870 (13) | 0.316 (3) | 0.051 (5)* | |
| H2 | 0.642 (4) | 0.3377 (12) | 0.168 (3) | 0.057 (5)* | |
| H3 | 0.377 (4) | 0.3498 (12) | 0.163 (3) | 0.050 (5)* | |
| C1 | 0.6023 (3) | 0.50463 (8) | 0.3001 (2) | 0.0335 (3) | |
| H11 | 0.448 (3) | 0.5150 (11) | 0.198 (3) | 0.041 (4)* | |
| H12 | 0.738 (4) | 0.5022 (11) | 0.221 (3) | 0.043 (4)* | |
| C2 | 0.5751 (2) | 0.41590 (8) | 0.41008 (18) | 0.0281 (2) | |
| H21 | 0.726 (3) | 0.4018 (10) | 0.503 (2) | 0.029 (3)* | |
| C3 | 0.3565 (3) | 0.41864 (9) | 0.5386 (2) | 0.0358 (3) | |
| H31 | 0.203 (3) | 0.4276 (11) | 0.445 (3) | 0.042 (4)* | |
| H32 | 0.355 (3) | 0.3590 (11) | 0.613 (3) | 0.044 (4)* |
| Cl1 | 0.03850 (18) | 0.03987 (18) | 0.04168 (19) | −0.00250 (12) | 0.01427 (13) | 0.00190 (13) |
| N1 | 0.0361 (5) | 0.0330 (5) | 0.0350 (5) | −0.0006 (4) | 0.0137 (4) | −0.0018 (4) |
| C1 | 0.0416 (6) | 0.0331 (6) | 0.0301 (6) | −0.0022 (5) | 0.0179 (5) | 0.0026 (4) |
| C2 | 0.0275 (5) | 0.0315 (5) | 0.0267 (5) | 0.0006 (4) | 0.0082 (4) | 0.0021 (4) |
| C3 | 0.0394 (6) | 0.0341 (6) | 0.0390 (6) | −0.0078 (5) | 0.0211 (5) | −0.0008 (5) |
| N1—C2 | 1.4924 (16) | C2—C3 | 1.5201 (16) |
| C1—C2 | 1.5130 (17) | C2—H21 | 0.928 (15) |
| C1—C3i | 1.5259 (18) | C3—C1i | 1.5259 (18) |
| C1—H11 | 0.959 (17) | C3—H31 | 0.927 (17) |
| C1—H12 | 0.941 (19) | C3—H32 | 1.008 (17) |
| C2—N1—H1 | 110.2 (11) | N1—C2—C3 | 109.47 (10) |
| C2—N1—H2 | 114.4 (13) | N1—C2—C1 | 109.79 (10) |
| H1—N1—H2 | 105.8 (16) | C3—C2—C1 | 111.39 (10) |
| C2—N1—H3 | 111.6 (12) | N1—C2—H21 | 107.7 (9) |
| H1—N1—H3 | 107.8 (16) | C3—C2—H21 | 107.6 (9) |
| H2—N1—H3 | 106.8 (18) | C1—C2—H21 | 110.8 (9) |
| C2—C1—C3i | 110.91 (10) | C2—C3—C1i | 110.36 (10) |
| C2—C1—H11 | 108.6 (10) | C2—C3—H31 | 108.1 (11) |
| C3i—C1—H11 | 110.0 (10) | C1i—C3—H31 | 109.5 (10) |
| C2—C1—H12 | 110.8 (10) | C2—C3—H32 | 107.4 (10) |
| C3i—C1—H12 | 110.9 (10) | C1i—C3—H32 | 110.8 (10) |
| H11—C1—H12 | 105.6 (15) | H31—C3—H32 | 110.6 (15) |
| C3i—C1—C2—N1 | 178.07 (10) | N1—C2—C3—C1i | −177.94 (11) |
| C3i—C1—C2—C3 | 56.65 (16) | C1—C2—C3—C1i | −56.34 (16) |
| H··· | ||||
| N1—H3···Cl1ii | 0.88 (2) | 2.30 (2) | 3.1734 (15) | 170.3 (16) |
| N1—H2···Cl1iii | 0.86 (2) | 2.33 (2) | 3.1833 (13) | 171.9 (17) |
| N1—H1···Cl1 | 0.93 (2) | 2.23 (2) | 3.1584 (13) | 173.9 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H3⋯Cl1ii | 0.88 (2) | 2.30 (2) | 3.1734 (15) | 170.3 (16) |
| N1—H2⋯Cl1iii | 0.86 (2) | 2.33 (2) | 3.1833 (13) | 171.9 (17) |
| N1—H1⋯Cl1 | 0.93 (2) | 2.23 (2) | 3.1584 (13) | 173.9 (16) |
Symmetry codes: (ii) ; (iii) .