| Literature DB >> 21200733 |
Abstract
In the title compound, C(18)H(9)Cl(3)N(6)O(3), all bond lengths and angles are normal. The dihedral angles between the benzene ring and the three pyrazine rings are 72.67 (2), 60.73 (3) and 77.74 (2)°. The crystal packing is stabilized by van der Waals forces and by a weak π-π stacking inter-action between pyrazine rings, with a centroid-centroid distance of 3.487 (2) Å.Entities:
Year: 2007 PMID: 21200733 PMCID: PMC2915235 DOI: 10.1107/S160053680706360X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H9Cl3N6O3 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1699 reflections | |
| θ = 2.8–23.1º | |
| µ = 0.51 mm−1 | |
| α = 72.768 (3)º | |
| β = 68.308 (3)º | Prism, colorless |
| γ = 69.342 (3)º | 0.58 × 0.31 × 0.30 mm |
| Bruker SMART CCD area-detector diffractometer | 3375 independent reflections |
| Radiation source: fine-focus sealed tube | 2797 reflections with |
| Monochromator: graphite | |
| θmax = 25.0º | |
| φ and ω scans | θmin = 2.0º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 2004) | |
| 4925 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 3375 reflections | Δρmax = 0.22 e Å−3 |
| 271 parameters | Δρmin = −0.39 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.04661 (7) | 0.67966 (7) | 0.44208 (6) | 0.0642 (2) | |
| Cl2 | 0.43548 (9) | 1.27994 (7) | −0.59901 (7) | 0.0772 (2) | |
| Cl3 | 0.32169 (10) | 1.47146 (8) | 0.07383 (9) | 0.0893 (3) | |
| O1 | 0.43622 (16) | 0.85408 (15) | 0.05573 (15) | 0.0530 (4) | |
| O2 | 0.1867 (2) | 0.93858 (16) | −0.27062 (15) | 0.0616 (4) | |
| O3 | −0.01216 (16) | 1.23869 (14) | 0.03280 (16) | 0.0513 (4) | |
| N1 | −0.1102 (3) | 1.4653 (2) | 0.2505 (2) | 0.0743 (6) | |
| N2 | 0.4938 (2) | 0.6220 (2) | 0.3517 (2) | 0.0701 (6) | |
| N3 | 0.2331 (3) | 1.0283 (2) | −0.6181 (2) | 0.0672 (6) | |
| N4 | 0.1437 (2) | 1.34503 (17) | 0.05891 (17) | 0.0469 (4) | |
| N5 | 0.3057 (2) | 1.09657 (17) | −0.42807 (17) | 0.0459 (4) | |
| N6 | 0.25692 (18) | 0.76867 (16) | 0.23874 (16) | 0.0409 (4) | |
| C1 | 0.0239 (4) | 1.4929 (3) | 0.2147 (3) | 0.0718 (8) | |
| H1B | 0.0338 | 1.5541 | 0.2539 | 0.086* | |
| C2 | 0.3070 (3) | 1.1226 (3) | −0.6499 (2) | 0.0600 (6) | |
| H2B | 0.3358 | 1.1674 | −0.7377 | 0.072* | |
| C3 | −0.1181 (3) | 1.3782 (3) | 0.1916 (2) | 0.0610 (6) | |
| H3B | −0.2104 | 1.3560 | 0.2147 | 0.073* | |
| C4 | 0.5191 (3) | 0.7021 (3) | 0.2337 (2) | 0.0626 (7) | |
| H4B | 0.6188 | 0.7094 | 0.1867 | 0.075* | |
| C5 | 0.1484 (3) | 1.4320 (2) | 0.1203 (2) | 0.0542 (6) | |
| C6 | 0.1940 (3) | 0.9688 (3) | −0.4911 (2) | 0.0602 (6) | |
| H6B | 0.1415 | 0.9025 | −0.4643 | 0.072* | |
| C7 | 0.3414 (2) | 1.1549 (2) | −0.5553 (2) | 0.0488 (5) | |
| C8 | 0.2308 (3) | 1.0047 (2) | −0.3975 (2) | 0.0470 (5) | |
| C9 | 0.3493 (3) | 0.6156 (2) | 0.4159 (2) | 0.0540 (6) | |
| H9A | 0.3264 | 0.5614 | 0.5000 | 0.065* | |
| C10 | 0.2025 (3) | 0.9832 (2) | −0.1693 (2) | 0.0467 (5) | |
| C11 | 0.3125 (2) | 0.8988 (2) | −0.1081 (2) | 0.0467 (5) | |
| H11A | 0.3812 | 0.8202 | −0.1386 | 0.056* | |
| C12 | 0.2348 (2) | 0.68880 (19) | 0.3581 (2) | 0.0407 (5) | |
| C13 | 0.3169 (2) | 0.9348 (2) | −0.0002 (2) | 0.0421 (5) | |
| C14 | 0.0097 (2) | 1.3191 (2) | 0.0952 (2) | 0.0440 (5) | |
| C15 | 0.1076 (2) | 1.12977 (19) | −0.0168 (2) | 0.0403 (5) | |
| C16 | 0.2156 (2) | 1.0492 (2) | 0.0488 (2) | 0.0409 (4) | |
| H16A | 0.2196 | 1.0713 | 0.1226 | 0.049* | |
| C17 | 0.0996 (2) | 1.0992 (2) | −0.1265 (2) | 0.0444 (5) | |
| H17A | 0.0268 | 1.1553 | −0.1699 | 0.053* | |
| C18 | 0.3995 (2) | 0.77556 (19) | 0.1787 (2) | 0.0419 (5) |
| Cl1 | 0.0539 (3) | 0.0787 (4) | 0.0503 (4) | −0.0223 (3) | −0.0150 (3) | 0.0057 (3) |
| Cl2 | 0.1024 (5) | 0.0756 (4) | 0.0561 (4) | −0.0460 (4) | −0.0100 (4) | −0.0072 (3) |
| Cl3 | 0.0920 (5) | 0.0802 (5) | 0.1186 (7) | −0.0405 (4) | −0.0433 (5) | −0.0155 (4) |
| O1 | 0.0408 (8) | 0.0582 (9) | 0.0452 (9) | −0.0084 (7) | −0.0133 (7) | 0.0055 (7) |
| O2 | 0.0966 (13) | 0.0628 (10) | 0.0390 (9) | −0.0401 (9) | −0.0227 (8) | −0.0036 (7) |
| O3 | 0.0463 (8) | 0.0467 (8) | 0.0619 (10) | −0.0073 (6) | −0.0212 (7) | −0.0118 (7) |
| N1 | 0.0842 (17) | 0.0791 (15) | 0.0478 (13) | −0.0113 (13) | −0.0091 (11) | −0.0225 (11) |
| N2 | 0.0501 (12) | 0.0856 (15) | 0.0539 (13) | −0.0002 (10) | −0.0244 (10) | 0.0053 (11) |
| N3 | 0.0846 (15) | 0.0855 (15) | 0.0436 (12) | −0.0288 (12) | −0.0243 (11) | −0.0158 (11) |
| N4 | 0.0521 (10) | 0.0416 (9) | 0.0439 (10) | −0.0120 (8) | −0.0150 (8) | −0.0040 (8) |
| N5 | 0.0531 (10) | 0.0477 (10) | 0.0367 (10) | −0.0103 (8) | −0.0156 (8) | −0.0090 (8) |
| N6 | 0.0451 (10) | 0.0397 (9) | 0.0361 (9) | −0.0061 (7) | −0.0174 (8) | −0.0044 (7) |
| C1 | 0.105 (2) | 0.0596 (15) | 0.0553 (16) | −0.0137 (15) | −0.0331 (16) | −0.0168 (13) |
| C2 | 0.0684 (15) | 0.0727 (16) | 0.0363 (12) | −0.0164 (13) | −0.0167 (11) | −0.0086 (11) |
| C3 | 0.0580 (14) | 0.0666 (15) | 0.0427 (13) | −0.0117 (12) | −0.0069 (11) | −0.0049 (12) |
| C4 | 0.0421 (12) | 0.0782 (16) | 0.0521 (15) | −0.0057 (11) | −0.0173 (11) | 0.0003 (12) |
| C5 | 0.0693 (15) | 0.0441 (12) | 0.0515 (14) | −0.0153 (11) | −0.0271 (12) | −0.0008 (10) |
| C6 | 0.0758 (16) | 0.0650 (14) | 0.0508 (15) | −0.0256 (13) | −0.0228 (12) | −0.0137 (12) |
| C7 | 0.0502 (12) | 0.0509 (12) | 0.0394 (12) | −0.0091 (10) | −0.0103 (9) | −0.0097 (10) |
| C8 | 0.0562 (12) | 0.0474 (12) | 0.0385 (12) | −0.0122 (10) | −0.0172 (10) | −0.0080 (9) |
| C9 | 0.0569 (14) | 0.0536 (12) | 0.0395 (12) | −0.0016 (10) | −0.0201 (10) | −0.0010 (10) |
| C10 | 0.0627 (13) | 0.0500 (12) | 0.0312 (11) | −0.0271 (10) | −0.0145 (10) | 0.0016 (9) |
| C11 | 0.0499 (12) | 0.0434 (11) | 0.0393 (12) | −0.0156 (9) | −0.0046 (9) | −0.0049 (9) |
| C12 | 0.0454 (11) | 0.0378 (10) | 0.0363 (11) | −0.0049 (8) | −0.0156 (9) | −0.0067 (8) |
| C13 | 0.0395 (10) | 0.0442 (11) | 0.0357 (11) | −0.0132 (8) | −0.0114 (9) | 0.0045 (9) |
| C14 | 0.0487 (12) | 0.0385 (10) | 0.0361 (11) | −0.0070 (9) | −0.0142 (9) | 0.0012 (8) |
| C15 | 0.0423 (11) | 0.0369 (10) | 0.0390 (11) | −0.0141 (8) | −0.0114 (9) | −0.0004 (8) |
| C16 | 0.0450 (11) | 0.0460 (11) | 0.0325 (10) | −0.0157 (9) | −0.0140 (9) | −0.0017 (8) |
| C17 | 0.0537 (12) | 0.0446 (11) | 0.0379 (11) | −0.0208 (10) | −0.0214 (10) | 0.0070 (9) |
| C18 | 0.0429 (11) | 0.0400 (10) | 0.0395 (11) | −0.0049 (8) | −0.0158 (9) | −0.0060 (9) |
| Cl1—C12 | 1.735 (2) | C1—C5 | 1.371 (4) |
| Cl2—C7 | 1.728 (2) | C1—H1B | 0.9300 |
| Cl3—C5 | 1.729 (3) | C2—C7 | 1.367 (3) |
| O1—C18 | 1.360 (2) | C2—H2B | 0.9300 |
| O1—C13 | 1.402 (2) | C3—C14 | 1.390 (3) |
| O2—C8 | 1.351 (3) | C3—H3B | 0.9300 |
| O2—C10 | 1.411 (3) | C4—C18 | 1.386 (3) |
| O3—C14 | 1.357 (3) | C4—H4B | 0.9300 |
| O3—C15 | 1.396 (2) | C6—C8 | 1.394 (3) |
| N1—C3 | 1.317 (3) | C6—H6B | 0.9300 |
| N1—C1 | 1.323 (4) | C9—C12 | 1.364 (3) |
| N2—C4 | 1.319 (3) | C9—H9A | 0.9300 |
| N2—C9 | 1.330 (3) | C10—C17 | 1.369 (3) |
| N3—C2 | 1.326 (3) | C10—C11 | 1.377 (3) |
| N3—C6 | 1.326 (3) | C11—C13 | 1.374 (3) |
| N4—C14 | 1.312 (3) | C11—H11A | 0.9300 |
| N4—C5 | 1.320 (3) | C13—C16 | 1.377 (3) |
| N5—C8 | 1.312 (3) | C15—C17 | 1.379 (3) |
| N5—C7 | 1.325 (3) | C15—C16 | 1.382 (3) |
| N6—C18 | 1.310 (3) | C16—H16A | 0.9300 |
| N6—C12 | 1.328 (2) | C17—H17A | 0.9300 |
| C18—O1—C13 | 118.64 (15) | O2—C8—C6 | 116.6 (2) |
| C8—O2—C10 | 118.93 (16) | N2—C9—C12 | 119.8 (2) |
| C14—O3—C15 | 121.38 (16) | N2—C9—H9A | 120.1 |
| C3—N1—C1 | 117.2 (2) | C12—C9—H9A | 120.1 |
| C4—N2—C9 | 117.46 (19) | C17—C10—C11 | 122.6 (2) |
| C2—N3—C6 | 116.8 (2) | C17—C10—O2 | 119.58 (19) |
| C14—N4—C5 | 115.09 (19) | C11—C10—O2 | 117.48 (19) |
| C8—N5—C7 | 114.59 (18) | C13—C11—C10 | 117.54 (19) |
| C18—N6—C12 | 114.85 (16) | C13—C11—H11A | 121.2 |
| N1—C1—C5 | 120.6 (2) | C10—C11—H11A | 121.2 |
| N1—C1—H1B | 119.7 | N6—C12—C9 | 124.2 (2) |
| C5—C1—H1B | 119.7 | N6—C12—Cl1 | 116.16 (14) |
| N3—C2—C7 | 120.9 (2) | C9—C12—Cl1 | 119.64 (17) |
| N3—C2—H2B | 119.6 | C11—C13—C16 | 122.78 (18) |
| C7—C2—H2B | 119.6 | C11—C13—O1 | 117.27 (18) |
| N1—C3—C14 | 120.9 (2) | C16—C13—O1 | 119.85 (19) |
| N1—C3—H3B | 119.6 | N4—C14—O3 | 120.43 (19) |
| C14—C3—H3B | 119.6 | N4—C14—C3 | 122.7 (2) |
| N2—C4—C18 | 121.0 (2) | O3—C14—C3 | 116.8 (2) |
| N2—C4—H4B | 119.5 | C17—C15—C16 | 122.55 (19) |
| C18—C4—H4B | 119.5 | C17—C15—O3 | 115.06 (17) |
| N4—C5—C1 | 123.6 (2) | C16—C15—O3 | 121.97 (19) |
| N4—C5—Cl3 | 116.79 (18) | C13—C16—C15 | 116.97 (19) |
| C1—C5—Cl3 | 119.6 (2) | C13—C16—H16A | 121.5 |
| N3—C6—C8 | 120.7 (2) | C15—C16—H16A | 121.5 |
| N3—C6—H6B | 119.6 | C10—C17—C15 | 117.57 (19) |
| C8—C6—H6B | 119.6 | C10—C17—H17A | 121.2 |
| N5—C7—C2 | 124.0 (2) | C15—C17—H17A | 121.2 |
| N5—C7—Cl2 | 116.06 (17) | N6—C18—O1 | 120.19 (17) |
| C2—C7—Cl2 | 119.97 (18) | N6—C18—C4 | 122.7 (2) |
| N5—C8—O2 | 120.29 (18) | O1—C18—C4 | 117.13 (19) |
| N5—C8—C6 | 123.1 (2) | ||
| C3—N1—C1—C5 | −0.2 (4) | N2—C9—C12—Cl1 | 179.78 (19) |
| C6—N3—C2—C7 | 0.5 (4) | C10—C11—C13—C16 | 1.0 (3) |
| C1—N1—C3—C14 | −0.4 (4) | C10—C11—C13—O1 | −175.44 (17) |
| C9—N2—C4—C18 | −0.6 (4) | C18—O1—C13—C11 | −111.4 (2) |
| C14—N4—C5—C1 | −0.4 (3) | C18—O1—C13—C16 | 72.1 (2) |
| C14—N4—C5—Cl3 | −178.98 (14) | C5—N4—C14—O3 | 175.50 (17) |
| N1—C1—C5—N4 | 0.7 (4) | C5—N4—C14—C3 | −0.2 (3) |
| N1—C1—C5—Cl3 | 179.2 (2) | C15—O3—C14—N4 | 33.3 (3) |
| C2—N3—C6—C8 | −0.4 (4) | C15—O3—C14—C3 | −150.69 (19) |
| C8—N5—C7—C2 | −1.0 (3) | N1—C3—C14—N4 | 0.7 (3) |
| C8—N5—C7—Cl2 | 178.31 (15) | N1—C3—C14—O3 | −175.2 (2) |
| N3—C2—C7—N5 | 0.2 (4) | C14—O3—C15—C17 | −150.15 (18) |
| N3—C2—C7—Cl2 | −179.10 (19) | C14—O3—C15—C16 | 37.0 (3) |
| C7—N5—C8—O2 | −179.47 (19) | C11—C13—C16—C15 | −0.8 (3) |
| C7—N5—C8—C6 | 1.1 (3) | O1—C13—C16—C15 | 175.49 (16) |
| C10—O2—C8—N5 | 8.9 (3) | C17—C15—C16—C13 | −0.1 (3) |
| C10—O2—C8—C6 | −171.7 (2) | O3—C15—C16—C13 | 172.23 (17) |
| N3—C6—C8—N5 | −0.5 (4) | C11—C10—C17—C15 | −0.6 (3) |
| N3—C6—C8—O2 | −179.9 (2) | O2—C10—C17—C15 | 172.20 (17) |
| C4—N2—C9—C12 | 1.0 (4) | C16—C15—C17—C10 | 0.8 (3) |
| C8—O2—C10—C17 | 76.1 (3) | O3—C15—C17—C10 | −172.01 (17) |
| C8—O2—C10—C11 | −110.8 (2) | C12—N6—C18—O1 | 179.91 (17) |
| C17—C10—C11—C13 | −0.2 (3) | C12—N6—C18—C4 | 1.8 (3) |
| O2—C10—C11—C13 | −173.20 (17) | C13—O1—C18—N6 | 4.8 (3) |
| C18—N6—C12—C9 | −1.4 (3) | C13—O1—C18—C4 | −177.0 (2) |
| C18—N6—C12—Cl1 | 178.83 (14) | N2—C4—C18—N6 | −0.9 (4) |
| N2—C9—C12—N6 | 0.0 (3) | N2—C4—C18—O1 | −179.0 (2) |