Literature DB >> 21200678

N-Butyl-pyridine-4-thio-carboxamide.

T Kavitha, C Revathi, M Hemalatha, A Dayalan, M N Ponnuswamy.   

Abstract

In the title mol-ecule, C(10)H(14)N(2)S, the n-butyl chain assumes a trans zigzag conformation. The dihedral angle between the pyridine ring and the thio-amide plane is 23.38 (8)°. The mol-ecules in the crystal structure are linked by an inter-molecular N-H⋯N hydrogen bond.

Entities:  

Year:  2007        PMID: 21200678      PMCID: PMC2915185          DOI: 10.1107/S1600536807062125

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Allen et al. (1987 ▶); Klimsova et al. (1999 ▶); Ramachandran (2005 ▶); Vannelli et al. (2002 ▶); Desiraju (1989 ▶); Dodge et al. (2006 ▶).

Experimental

Crystal data

C10H14N2S M = 194.29 Monoclinic, a = 8.0895 (3) Å b = 13.5947 (4) Å c = 10.4936 (3) Å β = 111.895 (2)° V = 1070.78 (6) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 293 (2) K 0.26 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (; Bruker, 2004 ▶) T min = 0.935, T max = 0.949 11437 measured reflections 2182 independent reflections 1744 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.120 S = 1.06 2182 reflections 122 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97 and PARST (Nardelli, 1995 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807062125/is2253sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807062125/is2253Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H14N2SF000 = 416
Mr = 194.29Dx = 1.205 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2182 reflections
a = 8.0895 (3) Åθ = 2.6–26.3º
b = 13.5947 (4) ŵ = 0.26 mm1
c = 10.4936 (3) ÅT = 293 (2) K
β = 111.895 (2)ºBlock, brown
V = 1070.78 (6) Å30.26 × 0.20 × 0.20 mm
Z = 4
Bruker APEXII kappa diffractometer2182 independent reflections
Radiation source: fine-focus sealed tube1744 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.027
T = 293(2) Kθmax = 26.3º
φ and ω scanθmin = 2.6º
Absorption correction: multi-scan(SADABS; Bruker, 2004)h = −9→10
Tmin = 0.935, Tmax = 0.949k = −15→16
11437 measured reflectionsl = −13→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.120  w = 1/[σ2(Fo2) + (0.0579P)2 + 0.2939P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2182 reflectionsΔρmax = 0.37 e Å3
122 parametersΔρmin = −0.38 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
H80.753 (2)−0.0813 (14)0.501 (2)0.055 (5)*
C20.6652 (3)−0.27758 (12)0.74847 (18)0.0533 (4)
H20.5953−0.33020.70160.064*
C30.6682 (2)−0.19391 (12)0.67438 (17)0.0461 (4)
H30.6041−0.19170.58020.055*
C40.7670 (2)−0.11385 (11)0.74138 (15)0.0406 (4)
C50.8613 (3)−0.12389 (14)0.88113 (18)0.0561 (5)
H50.9304−0.07210.93120.067*
C60.8525 (3)−0.21036 (14)0.94534 (19)0.0606 (5)
H60.9185−0.21541.03900.073*
C70.7739 (2)−0.01937 (11)0.67065 (17)0.0446 (4)
C90.7746 (3)0.06103 (12)0.46367 (18)0.0519 (4)
H9A0.89540.08640.50050.062*
H9B0.69650.11160.47480.062*
C100.7241 (3)0.04039 (12)0.31368 (18)0.0514 (4)
H10A0.60220.01680.27540.062*
H10B0.8008−0.01070.30170.062*
C110.7414 (3)0.13253 (14)0.23755 (19)0.0590 (5)
H11A0.67970.18620.26180.071*
H11B0.86630.15030.26730.071*
C120.6671 (4)0.1204 (2)0.0840 (2)0.0914 (8)
H12A0.68220.18060.04170.137*
H12B0.54270.10460.05330.137*
H12C0.72920.06830.05900.137*
N10.7559 (2)−0.28736 (10)0.88235 (15)0.0544 (4)
N80.7638 (2)−0.02581 (10)0.54257 (14)0.0450 (3)
S10.79203 (10)0.08676 (3)0.75316 (5)0.0775 (3)
U11U22U33U12U13U23
C20.0742 (12)0.0386 (9)0.0445 (10)−0.0106 (8)0.0193 (9)−0.0039 (7)
C30.0591 (10)0.0420 (8)0.0351 (8)−0.0019 (7)0.0152 (7)−0.0010 (6)
C40.0507 (9)0.0356 (8)0.0393 (9)−0.0011 (7)0.0212 (7)−0.0016 (6)
C50.0744 (13)0.0482 (10)0.0396 (9)−0.0177 (9)0.0143 (9)−0.0047 (7)
C60.0829 (14)0.0548 (11)0.0359 (9)−0.0104 (9)0.0126 (9)0.0045 (8)
C70.0563 (10)0.0371 (8)0.0420 (9)−0.0009 (7)0.0201 (8)−0.0013 (6)
C90.0716 (12)0.0354 (8)0.0507 (10)0.0021 (8)0.0253 (9)0.0062 (7)
C100.0649 (11)0.0424 (9)0.0485 (10)0.0035 (8)0.0228 (8)0.0079 (7)
C110.0721 (13)0.0510 (11)0.0593 (12)0.0064 (9)0.0307 (10)0.0166 (8)
C120.1018 (19)0.107 (2)0.0593 (14)−0.0033 (15)0.0234 (13)0.0293 (13)
N10.0776 (11)0.0426 (8)0.0432 (8)−0.0073 (7)0.0227 (8)0.0025 (6)
N80.0662 (9)0.0316 (7)0.0405 (7)0.0033 (6)0.0235 (7)0.0021 (6)
S10.1429 (6)0.0376 (3)0.0602 (4)−0.0080 (3)0.0474 (4)−0.0114 (2)
C2—N11.327 (2)C9—C101.498 (2)
C2—C31.383 (2)C9—H9A0.9700
C2—H20.9300C9—H9B0.9700
C3—C41.378 (2)C10—C111.520 (2)
C3—H30.9300C10—H10A0.9700
C4—C51.384 (2)C10—H10B0.9700
C4—C71.495 (2)C11—C121.504 (3)
C5—C61.370 (3)C11—H11A0.9700
C5—H50.9300C11—H11B0.9700
C6—N11.326 (2)C12—H12A0.9600
C6—H60.9300C12—H12B0.9600
C7—N81.318 (2)C12—H12C0.9600
C7—S11.6608 (16)N8—H80.86 (2)
C9—N81.463 (2)
N1—C2—C3123.97 (16)H9A—C9—H9B107.8
N1—C2—H2118.0C9—C10—C11110.82 (15)
C3—C2—H2118.0C9—C10—H10A109.5
C4—C3—C2119.42 (15)C11—C10—H10A109.5
C4—C3—H3120.3C9—C10—H10B109.5
C2—C3—H3120.3C11—C10—H10B109.5
C3—C4—C5116.63 (15)H10A—C10—H10B108.1
C3—C4—C7123.18 (14)C12—C11—C10113.24 (19)
C5—C4—C7120.18 (15)C12—C11—H11A108.9
C6—C5—C4119.76 (16)C10—C11—H11A108.9
C6—C5—H5120.1C12—C11—H11B108.9
C4—C5—H5120.1C10—C11—H11B108.9
N1—C6—C5124.15 (17)H11A—C11—H11B107.7
N1—C6—H6117.9C11—C12—H12A109.5
C5—C6—H6117.9C11—C12—H12B109.5
N8—C7—C4116.70 (13)H12A—C12—H12B109.5
N8—C7—S1123.30 (12)C11—C12—H12C109.5
C4—C7—S1120.00 (12)H12A—C12—H12C109.5
N8—C9—C10113.15 (14)H12B—C12—H12C109.5
N8—C9—H9A108.9C6—N1—C2116.05 (15)
C10—C9—H9A108.9C7—N8—C9121.94 (14)
N8—C9—H9B108.9C7—N8—H8122.2 (13)
C10—C9—H9B108.9C9—N8—H8115.8 (13)
N1—C2—C3—C4−1.5 (3)C5—C4—C7—S1−33.5 (2)
C2—C3—C4—C51.2 (2)N8—C9—C10—C11−178.86 (16)
C2—C3—C4—C7−178.13 (16)C9—C10—C11—C12−171.50 (18)
C3—C4—C5—C6−0.1 (3)C5—C6—N1—C20.6 (3)
C7—C4—C5—C6179.24 (18)C3—C2—N1—C60.6 (3)
C4—C5—C6—N1−0.9 (3)C4—C7—N8—C9−178.06 (15)
C3—C4—C7—N8−33.7 (2)S1—C7—N8—C92.4 (3)
C5—C4—C7—N8146.99 (17)C10—C9—N8—C7−168.50 (16)
C3—C4—C7—S1145.88 (15)
D—H···AD—HH···AD···AD—H···A
N8—H8···N1i0.859 (19)2.182 (19)3.033 (2)171 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N8—H8⋯N1i0.859 (19)2.182 (19)3.033 (2)171 (2)

Symmetry code: (i) .

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