Literature DB >> 21200488

Diaqua-bis(picolinato N-oxide-κO,O')zinc(II).

Xiu-Bing Li1, Run-Ling Shang, Bai-Wang Sun.   

Abstract

In the title compound, [Zn(C(6)H(4)NO(3))(2)(H(2)O)(2)], the Zn atom is located on a centre of inversion and shows a distorted octa-hedral coordination geometry. Two aqua ligands occupy the axial positions and four O atoms of the two chelating picolinic acid N-oxide ligands are located in the equatorial plane. Inter-molecular hydrogen bonds between aqua ligands and organic ligands link mol-ecules into a two-dimensional arrangement.

Entities:  

Year:  2007        PMID: 21200488      PMCID: PMC2915079          DOI: 10.1107/S1600536807043681

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bayot et al. (2006 ▶); Ciurtin et al. (2003 ▶); Lawrence et al. (1999 ▶); Meinrath et al. (2006 ▶); Shan et al. (2002 ▶); Steiner (2002 ▶); Yang et al. (2004 ▶); Zafar et al. (2000 ▶).

Experimental

Crystal data

[Zn(C6H4NO3)2(H2O)2] M = 377.63 Monoclinic, a = 6.6837 (5) Å b = 15.7376 (13) Å c = 6.9935 (6) Å β = 115.3700 (10)° V = 664.67 (9) Å3 Z = 2 Mo Kα radiation μ = 1.90 mm−1 T = 298 (2) K 0.21 × 0.18 × 0.16 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan CrystalClear (Rigaku, 2005 ▶) T min = 0.674, T max = 0.733 3515 measured reflections 1170 independent reflections 1033 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.149 S = 1.15 1170 reflections 106 parameters H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.90 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: SHELXTL (Sheldrick, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807043681/er2040sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807043681/er2040Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C6H4NO3)2(H2O)2]F000 = 384
Mr = 377.63Dx = 1.887 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 6.6837 (5) Åθ = 7.5–15º
b = 15.7376 (13) ŵ = 1.90 mm1
c = 6.9935 (6) ÅT = 298 (2) K
β = 115.3700 (10)ºBlock, colourless
V = 664.67 (9) Å30.21 × 0.18 × 0.16 mm
Z = 2
Bruker SMART CCD diffractometer1170 independent reflections
Radiation source: fine-focus sealed tube1033 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.019
Detector resolution: 10 pixels mm-1θmax = 25.0º
T = 298(2) Kθmin = 2.6º
φ and ω scansh = −7→7
Absorption correction: multi-scanCrystalClear (Rigaku, 2005)k = −18→17
Tmin = 0.674, Tmax = 0.733l = −6→8
3515 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.149  w = 1/[σ2(Fo2) + (0.0918P)2 + 1.2258P] where P = (Fo2 + 2Fc2)/3
S = 1.15(Δ/σ)max < 0.001
1170 reflectionsΔρmax = 0.56 e Å3
106 parametersΔρmin = −0.90 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.50000.50000.50000.0252 (3)
O1W0.4917 (5)0.43468 (18)0.7653 (4)0.0222 (7)
H1WA0.62910.41700.85150.033*
H1WB0.44230.47020.83650.033*
O1−0.1745 (5)0.49427 (16)0.1316 (6)0.0229 (7)
O20.1644 (5)0.52224 (19)0.3760 (5)0.0218 (7)
O30.4215 (4)0.38945 (17)0.3288 (5)0.0217 (7)
N10.2521 (5)0.3424 (2)0.3225 (5)0.0168 (7)
C10.0530 (6)0.3771 (2)0.2833 (6)0.0175 (8)
C2−0.1198 (7)0.3240 (3)0.2650 (7)0.0232 (9)
H2A−0.26100.34830.23840.028*
C3−0.0923 (8)0.2365 (3)0.2826 (7)0.0287 (10)
H3A−0.21350.19990.26670.034*
C40.1137 (8)0.2034 (3)0.3249 (7)0.0273 (10)
H4A0.13860.14320.34030.033*
C50.2825 (7)0.2572 (3)0.3436 (7)0.0234 (9)
H5A0.42590.23410.37370.028*
C60.0146 (6)0.4725 (3)0.2616 (6)0.0177 (8)
U11U22U33U12U13U23
Zn10.0186 (5)0.0236 (5)0.0293 (5)−0.0011 (2)0.0064 (4)−0.0029 (3)
O1W0.0178 (14)0.0239 (15)0.0222 (14)0.0006 (11)0.0059 (11)0.0006 (11)
O10.0128 (16)0.0208 (16)0.0256 (17)0.0033 (10)−0.0008 (13)−0.0021 (11)
O20.0118 (14)0.0176 (13)0.0289 (16)−0.0007 (11)0.0020 (12)−0.0062 (13)
O30.0131 (13)0.0210 (14)0.0313 (16)−0.0047 (11)0.0099 (12)−0.0094 (12)
N10.0162 (16)0.0150 (16)0.0172 (16)−0.0009 (12)0.0051 (13)−0.0036 (13)
C10.0165 (19)0.0163 (19)0.0172 (19)0.0014 (15)0.0048 (16)−0.0027 (15)
C20.019 (2)0.021 (2)0.028 (2)−0.0020 (16)0.0087 (18)−0.0012 (17)
C30.032 (3)0.023 (2)0.032 (2)−0.0086 (18)0.015 (2)−0.0015 (18)
C40.039 (3)0.014 (2)0.029 (2)0.0003 (17)0.014 (2)−0.0004 (17)
C50.027 (2)0.0164 (19)0.025 (2)0.0044 (16)0.0089 (19)−0.0026 (16)
C60.0146 (19)0.0186 (19)0.022 (2)0.0019 (16)0.0101 (16)0.0006 (16)
Zn1—O3i2.049 (3)N1—C11.354 (5)
Zn1—O32.049 (3)N1—C51.356 (5)
Zn1—O2i2.059 (3)C1—C21.386 (6)
Zn1—O22.059 (3)C1—C61.520 (5)
Zn1—O1Wi2.143 (3)C2—C31.389 (6)
Zn1—O1W2.143 (3)C2—H2A0.9600
O1W—H1WA0.9000C3—C41.381 (7)
O1W—H1WB0.9001C3—H3A0.9601
O1—C61.247 (5)C4—C51.371 (6)
O2—C61.253 (5)C4—H4A0.9597
O3—N11.338 (4)C5—H5A0.9600
O3i—Zn1—O3180.00 (8)O3—N1—C5117.3 (3)
O3i—Zn1—O2i86.46 (11)C1—N1—C5120.6 (3)
O3—Zn1—O2i93.54 (11)N1—C1—C2118.9 (4)
O3i—Zn1—O293.54 (11)N1—C1—C6121.8 (3)
O3—Zn1—O286.46 (11)C2—C1—C6119.2 (3)
O2i—Zn1—O2180.0C3—C2—C1121.1 (4)
O3i—Zn1—O1Wi90.21 (11)C3—C2—H2A119.6
O3—Zn1—O1Wi89.79 (11)C1—C2—H2A119.3
O2i—Zn1—O1Wi91.07 (12)C2—C3—C4118.3 (4)
O2—Zn1—O1Wi88.93 (12)C2—C3—H3A120.8
O3i—Zn1—O1W89.79 (11)C4—C3—H3A120.9
O3—Zn1—O1W90.21 (11)C5—C4—C3119.5 (4)
O2i—Zn1—O1W88.93 (12)C5—C4—H4A120.2
O2—Zn1—O1W91.07 (12)C3—C4—H4A120.3
O1Wi—Zn1—O1W180.00 (13)N1—C5—C4121.5 (4)
Zn1—O1W—H1WA109.3N1—C5—H5A119.2
Zn1—O1W—H1WB109.5C4—C5—H5A119.4
H1WA—O1W—H1WB109.5O2—C6—O1125.2 (4)
C6—O2—Zn1126.3 (3)O2—C6—C1119.9 (4)
N1—O3—Zn1119.4 (2)O1—C6—C1114.8 (3)
O3—N1—C1121.9 (3)
O3i—Zn1—O2—C6−175.0 (3)C2—C1—C2—C30(100)
O3—Zn1—O2—C65.0 (3)C6—C1—C2—C3179.7 (4)
O1Wi—Zn1—O2—C694.8 (3)C1—C2—C3—C20(2)
O1W—Zn1—O2—C6−85.2 (3)C2—C2—C3—C40.0 (7)
O2i—Zn1—O3—N1137.7 (3)C1—C2—C3—C41.8 (7)
O2—Zn1—O3—N1−42.3 (3)C2—C3—C4—C5−1.4 (7)
O1Wi—Zn1—O3—N1−131.2 (3)C2—C3—C4—C5−1.4 (7)
O1W—Zn1—O3—N148.8 (3)O3—N1—C5—C4−175.5 (4)
Zn1—O3—N1—C147.5 (4)C1—N1—C5—C40.4 (6)
Zn1—O3—N1—C5−136.6 (3)C3—C4—C5—N10.3 (6)
O3—N1—C1—C2175.7 (3)Zn1—O2—C6—O1−154.2 (3)
C5—N1—C1—C20.0 (6)Zn1—O2—C6—C128.9 (5)
O3—N1—C1—C2175.7 (3)N1—C1—C6—O2−36.9 (6)
C5—N1—C1—C20.0 (6)C2—C1—C6—O2142.3 (4)
O3—N1—C1—C6−5.1 (5)C2—C1—C6—O2142.3 (4)
C5—N1—C1—C6179.2 (4)N1—C1—C6—O1145.9 (4)
N1—C1—C2—C20.0 (2)C2—C1—C6—O1−34.9 (5)
C6—C1—C2—C20.00 (6)C2—C1—C6—O1−34.9 (5)
N1—C1—C2—C3−1.1 (6)
D—H···AD—HH···AD···AD—H···A
O1W—H1WB···O1ii0.901.982.753 (4)143
O1W—H1WA···O1iii0.902.202.742 (4)118
Zn1—O32.049 (3)
Zn1—O22.059 (3)
Zn1—O1W2.143 (3)
O3—Zn1—O286.46 (11)
O3—Zn1—O1Wi89.79 (11)
O2—Zn1—O1Wi88.93 (12)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WB⋯O1ii0.901.982.753 (4)143
O1W—H1WA⋯O1iii0.902.202.742 (4)118

Symmetry codes: (ii) ; (iii) .

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