| Literature DB >> 21196650 |
Mohammad K Arababadi1, Ali A Pourfathollah, Abdollah Jafarzadeh, Gholamhossein Hassanshahi, Saeed Daneshmandi, Ali Shamsizadeh, Derek Kennedy.
Abstract
BACKGROUND/AIM: Occult hepatitis B infection (OBI) is identified as a form of hepatitis in which despite the absence of detectable HBsAg, HBV-DNA is observed in peripheral blood of patients. The main aim of this study has been to investigate the association between polymorphisms in +874 of IFN-γ and +1188 of IL-12 with their serum level in patients suffering from OBI.Entities:
Mesh:
Substances:
Year: 2011 PMID: 21196650 PMCID: PMC3099077 DOI: 10.4103/1319-3767.74461
Source DB: PubMed Journal: Saudi J Gastroenterol ISSN: 1319-3767 Impact factor: 2.485
Sequences of primers and size fragment of PCR production
| Genes | Primers | Product size (bp) | References |
|---|---|---|---|
| S gene (HBV) | F: TCGTGGTGGACTTCTCTC | 500 | [ |
| R: ACAGTGGGGGAAAGCCC | |||
| IL-12 | IL-12 +1188 Common (F): GACACAACGGAATAGACC | 116 | [ |
| IL-12 +1188 A: AATGAGCATTTAGCATCT | |||
| IL-12 +1188 C: AATGAGCATTTAGCATCG | |||
| Control of IL-12 amplification (beta globulin) | F: TGCCAAGTGGAGCACCCAA | 796 | [ |
| R: GCATCTTGCTCTGTGCAGAT | |||
| IFN-γ | IFN-γ +874 Common (F): GACACAACGGAATAGACC | 262 | [ |
| IFN-γ +874 A: AATGAGCATTTAGCATCT | |||
| IFN-γ +874 C: AATGAGCATTTAGCATCG | |||
| Control of IFN-γ amplification (beta globulin) | F: ACACAACTGTGTTCACTAGC | 100 | [ |
| R: CAACTTCATCCACGTTCACC |
Demographic and socioeconomic conditions of occult hepatitis B virus-infected patients and controls
| Variant | Healthy control | Patient |
|---|---|---|
| Age | 28 ± 8 | 28 ± 6 |
| Sex | ||
| Female | 3 (3) | 2 (3.5) |
| Male | 97 (97.8) | 55 (96.5) |
| Socio-economic status | ||
| Weak | 22 (22) | 12 (21) |
| Medium | 47 (47) | 28 (49) |
| High | 31 (31) | 17 (30) |
Figures in parentheses are in percentage
Indicates polymorphisms in +1188 region of IL-12 gene in OBI patients and controls
| Polymorphisms / condition | AA | AC | CC | Total |
|---|---|---|---|---|
| Patients | 20 | 37 | 0 | 57 |
| 35.1 | 64.9 | 0 | 100 | |
| Healthy control | 36 | 54 | 10 | 100 |
| 36 | 54% | 10 | 100 | |
| >0.90 | >0.24 | <0.033 |
OBI: Occult hepatitis B infection
Polymorphisms in +874 region of IFN-γ gene in OBI patients and controls
| Polymorphisms / condition | AA | AT | TT | Total |
|---|---|---|---|---|
| Patients | 18 | 25 | 14 | 57 |
| 31.5 | 43.8 | 24.7 | 100 | |
| Healthy control | 28 | 47 | 25 | 100 |
| 28 | 47 | 25 | 100 | |
| >0.1 | >0.1 | >0.1 |
OBI: Occult hepatitis B infection
Figure 1Serum levels of IL-12 and IFN-γ genes in OBI and their correlation with the polymorphisms within IL-12 and IFN- patients and healthy controls. As it is obvious in figure, no signifi cant differences were seen regarding serum levels of IL-12 in OBI patients in comparison with controls (a) (P>0.1) while the serum was increased (c) (levels of IFN-γ, P<0.001). No significant differences were seen between the polymorphisms within IL-12 (b) (P>0.1) and IFN-γ (d) (P>0.1) genes and their serum levels. Data are shown as mean ± SE