Literature DB >> 21193669

Phosphate transporter genes as reliable gene markers for the identification and discrimination of arbuscular mycorrhizal fungi in the genus glomus.

Serge Sokolski1, Yolande Dalpé, Yves Piché.   

Abstract

An inorganic phosphate transporter gene sequence (852-bp section) allowed discrimination between 10 Glomus fungal species represented by 25 strains. It was particularly valuable in differentiating between morphologically similar species with nucleotide and amino acid sequence differences higher than 3%. This gene is proposed as a reliable barcode for the Glomeromycetes.

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Year:  2010        PMID： 21193669      PMCID： PMC3067266          DOI： 10.1128/AEM.00919-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  24 in total

1.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

2.  DNA barcoding of arbuscular mycorrhizal fungi.

Authors:  Herbert Stockinger; Manuela Krüger; Arthur Schüßler
Journal:  New Phytol       Date:  2010-04-23       Impact factor: 10.151

Review 3.  Protein database searches using compositionally adjusted substitution matrices.

Authors:  Stephen F Altschul; John C Wootton; E Michael Gertz; Richa Agarwala; Aleksandr Morgulis; Alejandro A Schäffer; Yi-Kuo Yu
Journal:  FEBS J       Date:  2005-10       Impact factor: 5.542

4.  Phylogenetic analysis of the Glomeromycota by partial beta-tubulin gene sequences.

Authors:  Zola Msiska; Joseph B Morton
Journal:  Mycorrhiza       Date:  2008-12-23       Impact factor: 3.387

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Mitochondrial large ribosomal subunit sequences are homogeneous within isolates of Glomus (arbuscular mycorrhizal fungi, Glomeromycota).

Authors:  Philipp A Raab; Annemarie Brennwald; Dirk Redecker
Journal:  Mycol Res       Date:  2005-12

7.  A phosphate transporter gene from the extra-radical mycelium of an arbuscular mycorrhizal fungus Glomus intraradices is regulated in response to phosphate in the environment.

Authors:  I E Maldonado-Mendoza; G R Dewbre; M J Harrison
Journal:  Mol Plant Microbe Interact       Date:  2001-10       Impact factor: 4.171

8.  Phylogeny of the Glomerales and Diversisporales (fungi: Glomeromycota) from actin and elongation factor 1-alpha sequences.

Authors:  Thorunn Helgason; Irene J Watson; J Peter W Young
Journal:  FEMS Microbiol Lett       Date:  2003-12-05       Impact factor: 2.742

9.  Monophyly of beta-tubulin and H+-ATPase gene variants in Glomus intraradices: consequences for molecular evolutionary studies of AM fungal genes.

Authors:  Nicolas Corradi; Gerrit Kuhn; Ian R Sanders
Journal:  Fungal Genet Biol       Date:  2004-02       Impact factor: 3.495

10.  Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification.

Authors:  R Henrik Nilsson; Erik Kristiansson; Martin Ryberg; Nils Hallenberg; Karl-Henrik Larsson
Journal:  Evol Bioinform Online       Date:  2008-05-26       Impact factor: 1.625
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  4 in total

1.  Evidence for the sexual origin of heterokaryosis in arbuscular mycorrhizal fungi.

Authors:  Jeanne Ropars; Kinga Sędzielewska Toro; Jessica Noel; Adrian Pelin; Philippe Charron; Laurent Farinelli; Timea Marton; Manuela Krüger; Jörg Fuchs; Andreas Brachmann; Nicolas Corradi
Journal:  Nat Microbiol       Date:  2016-03-21       Impact factor: 17.745

2.  Molecular cloning and functional analysis of two phosphate transporter genes from Rhizopogon luteolus and Leucocortinarius bulbiger, two ectomycorrhizal fungi of Pinus tabulaeformis.

Authors:  Rong Zheng; Jugang Wang; Min Liu; Guozhen Duan; Xiaomin Gao; Shulan Bai; Yachao Han
Journal:  Mycorrhiza       Date:  2016-04-21       Impact factor: 3.387

3.  Relationship between genetic variability in Rhizophagus irregularis and tolerance to saline conditions.

Authors:  E Campagnac; D P Khasa
Journal:  Mycorrhiza       Date:  2013-08-14       Impact factor: 3.387

4.  A population genomics approach shows widespread geographical distribution of cryptic genomic forms of the symbiotic fungus Rhizophagus irregularis.

Authors:  Romain Savary; Frédéric G Masclaux; Tania Wyss; Germain Droh; Joaquim Cruz Corella; Ana Paula Machado; Joseph B Morton; Ian R Sanders
Journal:  ISME J       Date:  2017-10-13       Impact factor: 10.302
  4 in total

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