Literature DB >> 21185304

Nucleotide pocket thermodynamics measured by EPR reveal how energy partitioning relates myosin speed to efficiency.

Thomas J Purcell1, Nariman Naber, Kathy Franks-Skiba, Alexander R Dunn, Catherine C Eldred, Christopher L Berger, András Málnási-Csizmadia, James A Spudich, Douglas M Swank, Edward Pate, Roger Cooke.   

Abstract

We have used spin-labeled ADP to investigate the dynamics of the nucleotide-binding pocket in a series of myosins, which have a range of velocities. Electron paramagnetic resonance spectroscopy reveals that the pocket is in equilibrium between open and closed conformations. In the absence of actin, the closed conformation is favored. When myosin binds actin, the open conformation becomes more favored, facilitating nucleotide release. We found that faster myosins favor a more closed pocket in the actomyosin•ADP state, with smaller values of ΔH(0) and ΔS(0), even though these myosins release ADP at a faster rate. A model involving a partitioning of free energy between work-generating steps prior to rate-limiting ADP release explains both the unexpected correlation between velocity and opening of the pocket and the observation that fast myosins are less efficient than slow myosins.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21185304      PMCID: PMC3347976          DOI: 10.1016/j.jmb.2010.11.053

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  59 in total

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Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

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Journal:  J Muscle Res Cell Motil       Date:  1996-12       Impact factor: 2.698

6.  Interaction of actin and ADP with the head domain of smooth muscle myosin: implications for strain-dependent ADP release in smooth muscle.

Authors:  C R Cremo; M A Geeves
Journal:  Biochemistry       Date:  1998-02-17       Impact factor: 3.162

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Authors:  E M De La Cruz; A L Wells; S S Rosenfeld; E M Ostap; H L Sweeney
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

8.  Cardiac myosin isoforms from different species have unique enzymatic and mechanical properties.

Authors:  Ulf P Malmqvist; Alexander Aronshtam; Susan Lowey
Journal:  Biochemistry       Date:  2004-11-30       Impact factor: 3.162

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Journal:  J Biol Chem       Date:  1985-10-25       Impact factor: 5.157

10.  Smooth muscle myosin cross-bridge interactions modulate actin filament sliding velocity in vitro.

Authors:  D M Warshaw; J M Desrosiers; S S Work; K M Trybus
Journal:  J Cell Biol       Date:  1990-08       Impact factor: 10.539

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  10 in total

1.  A novel actin binding site of myosin required for effective muscle contraction.

Authors:  Boglárka H Várkuti; Zhenhui Yang; Bálint Kintses; Péter Erdélyi; Irén Bárdos-Nagy; Attila L Kovács; Péter Hári; Miklós Kellermayer; Tibor Vellai; András Málnási-Csizmadia
Journal:  Nat Struct Mol Biol       Date:  2012-02-12       Impact factor: 15.369

2.  Skeletal muscle signature of a champion sprint runner.

Authors:  Scott Trappe; Nicholas Luden; Kiril Minchev; Ulrika Raue; Bozena Jemiolo; Todd A Trappe
Journal:  J Appl Physiol (1985)       Date:  2015-03-06

3.  The histone H4 tail regulates the conformation of the ATP-binding pocket in the SNF2h chromatin remodeling enzyme.

Authors:  Lisa R Racki; Nariman Naber; Ed Pate; John D Leonard; Roger Cooke; Geeta J Narlikar
Journal:  J Mol Biol       Date:  2014-03-04       Impact factor: 5.469

4.  EPR spectra and molecular dynamics agree that the nucleotide pocket of myosin V is closed and that it opens on binding actin.

Authors:  Thomas J Purcell; Nariman Naber; Shirley Sutton; Roger Cooke; Edward Pate
Journal:  J Mol Biol       Date:  2011-05-27       Impact factor: 5.469

5.  Myosin-driven rescue of contractile reserve and energetics in mouse hearts bearing familial hypertrophic cardiomyopathy-associated mutant troponin T is mutation-specific.

Authors:  Huamei He; Kirsten Hoyer; Hai Tao; Ronald Rice; Jesus Jimenez; Jil C Tardiff; Joanne S Ingwall
Journal:  J Physiol       Date:  2012-08-20       Impact factor: 5.182

6.  A conformational switch in HP1 releases auto-inhibition to drive heterochromatin assembly.

Authors:  Daniele Canzio; Maofu Liao; Nariman Naber; Edward Pate; Adam Larson; Shenping Wu; Diana B Marina; Jennifer F Garcia; Hiten D Madhani; Roger Cooke; Peter Schuck; Yifan Cheng; Geeta J Narlikar
Journal:  Nature       Date:  2013-03-13       Impact factor: 49.962

7.  Conformational changes at the nucleotide site in the presence of bound ADP do not set the velocity of fast Drosophila myosins.

Authors:  Catherine C Eldred; Nariman Naber; Edward Pate; Roger Cooke; Douglas M Swank
Journal:  J Muscle Res Cell Motil       Date:  2012-12-01       Impact factor: 2.698

8.  Metal switch-controlled myosin II from Dictyostelium discoideum supports closure of nucleotide pocket during ATP binding coupled to detachment from actin filaments.

Authors:  Jared C Cochran; Morgan E Thompson; F Jon Kull
Journal:  J Biol Chem       Date:  2013-08-19       Impact factor: 5.157

9.  Evolution of mechanical cooperativity among myosin II motors.

Authors:  Jason A Wagoner; Ken A Dill
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-18       Impact factor: 11.205

10.  Opposing Pressures of Speed and Efficiency Guide the Evolution of Molecular Machines.

Authors:  Jason A Wagoner; Ken A Dill
Journal:  Mol Biol Evol       Date:  2019-12-01       Impact factor: 16.240

  10 in total

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