Literature DB >> 21184470

Integrating DNA barcode data and taxonomic practice: determination, discovery, and description.

Paul Z Goldstein1, Rob DeSalle.   

Abstract

DNA barcodes, like traditional sources of taxonomic information, are potentially powerful heuristics in the identification of described species but require mindful analytical interpretation. The role of DNA barcoding in generating hypotheses of new taxa in need of formal taxonomic treatment is discussed, and it is emphasized that the recursive process of character evaluation is both necessary and best served by understanding the empirical mechanics of the discovery process. These undertakings carry enormous ramifications not only for the translation of DNA sequence data into taxonomic information but also for our comprehension of the magnitude of species diversity and its disappearance. This paper examines the potential strengths and pitfalls of integrating DNA sequence data, specifically in the form of DNA barcodes as they are currently generated and analyzed, with taxonomic practice.

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Year:  2011        PMID: 21184470     DOI: 10.1002/bies.201000036

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  64 in total

1.  High levels of cryptic species diversity uncovered in Amazonian frogs.

Authors:  W Chris Funk; Marcel Caminer; Santiago R Ron
Journal:  Proc Biol Sci       Date:  2011-11-30       Impact factor: 5.349

Review 2.  Advances in taxonomy of genus phoma: polyphyletic nature and role of phenotypic traits and molecular systematics.

Authors:  Mahendra Kumar Rai; Vaibhav V Tiwari; László Irinyi; György János Kövics
Journal:  Indian J Microbiol       Date:  2013-12-04       Impact factor: 2.461

3.  When COI barcodes deceive: complete genomes reveal introgression in hairstreaks.

Authors:  Qian Cong; Jinhui Shen; Dominika Borek; Robert K Robbins; Paul A Opler; Zbyszek Otwinowski; Nick V Grishin
Journal:  Proc Biol Sci       Date:  2017-02-08       Impact factor: 5.349

4.  Genetic diversity and phylogeny analysis of Antheraea assamensis Helfer (Lepidoptera: Saturniidae) based on mitochondrial DNA sequences.

Authors:  Mousumi Saikia; Ramesh Nath; Dipali Devi
Journal:  J Genet       Date:  2019-03       Impact factor: 1.166

Review 5.  A world review of reported myiases caused by flower flies (Diptera: Syrphidae), including the first case of human myiasis from Palpada scutellaris (Fabricius, 1805).

Authors:  Celeste Pérez-Bañón; Cecilia Rojas; Mario Vargas; Ximo Mengual; Santos Rojo
Journal:  Parasitol Res       Date:  2020-01-31       Impact factor: 2.289

6.  Systematics and diversification of Anindobothrium Marques, Brooks & Lasso, 2001 (Eucestoda: Rhinebothriidea).

Authors:  Bruna Trevisan; Juliana F Primon; Fernando P L Marques
Journal:  PLoS One       Date:  2017-09-27       Impact factor: 3.240

7.  DeSignate: detecting signature characters in gene sequence alignments for taxon diagnoses.

Authors:  Thomas Hütter; Maximilian H Ganser; Manuel Kocher; Merima Halkic; Sabine Agatha; Nikolaus Augsten
Journal:  BMC Bioinformatics       Date:  2020-04-20       Impact factor: 3.169

8.  Phylogenetic systematics of Schacontia Dyar with descriptions of eight new species (Lepidoptera, Crambidae).

Authors:  Paul Z Goldstein; Mark A Metz; M Alma Solis
Journal:  Zookeys       Date:  2013-04-17       Impact factor: 1.546

9.  Pay Attention to the Overlooked Cryptic Diversity in Existing Barcoding Data: the Case of Mollusca with Character-Based DNA Barcoding.

Authors:  Shanmei Zou; Qi Li
Journal:  Mar Biotechnol (NY)       Date:  2016-02-22       Impact factor: 3.619

10.  DNA extraction from museum specimens of parasitic Hymenoptera.

Authors:  Jeremy C Andersen; Nicholas J Mills
Journal:  PLoS One       Date:  2012-10-15       Impact factor: 3.240

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