Literature DB >> 21183663

Genome sequence of Bacillus subtilis subsp. spizizenii gtP20b, isolated from the Indian ocean.

Longjiang Fan1, Shiping Bo, Huan Chen, Wanzhi Ye, Katrin Kleinschmidt, Heike I Baumann, Johannes F Imhoff, Michael Kleine, Daguang Cai.   

Abstract

Bacillus subtilis is an aerobic spore-forming Gram-positive bacterium that is a model organism and of great industrial significance as the source of diverse novel functional molecules. Here we present, to our knowledge, the first genome sequence of Bacillus subtilis strain gtP20b isolated from the marine environment. A subset of candidate genes and gene clusters were identified, which are potentially involved in production of diverse functional molecules, like novel ribosomal and nonribosomal antimicrobial peptides. The genome sequence described in this paper is due to its high strain specificity of great importance for basic as well as applied researches on marine organisms.

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Year:  2010        PMID: 21183663      PMCID: PMC3067579          DOI: 10.1128/JB.01351-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  14 in total

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5.  Understanding the evolutionary relationships and major traits of Bacillus through comparative genomics.

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6.  Versatile and open software for comparing large genomes.

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7.  High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies.

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8.  APD2: the updated antimicrobial peptide database and its application in peptide design.

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  8 in total

1.  Whole-genome sequences of Bacillus subtilis and close relatives.

Authors:  Ashlee M Earl; Mark Eppinger; W Florian Fricke; M J Rosovitz; David A Rasko; Sean Daugherty; Richard Losick; Roberto Kolter; Jacques Ravel
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

2.  Collection of antimicrobial peptides database and its derivatives: Applications and beyond.

Authors:  Faiza Hanif Waghu; Susan Idicula-Thomas
Journal:  Protein Sci       Date:  2019-09-30       Impact factor: 6.725

3.  An Aminoglycoside Antibacterial Substance, S-137-R, Produced by Newly Isolated Bacillus velezensis Strain RP137 from the Persian Gulf.

Authors:  Roya Pournejati; Ronald Gust; Hamid Reza Karbalaei-Heidari
Journal:  Curr Microbiol       Date:  2019-06-11       Impact factor: 2.188

4.  Survey of the Applications of NGS to Whole-Genome Sequencing and Expression Profiling.

Authors:  Jong-Sung Lim; Beom-Soon Choi; Jeong-Soo Lee; Chanseok Shin; Tae-Jin Yang; Jae-Sung Rhee; Jae-Seong Lee; Ik-Young Choi
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5.  Genetic Competence Drives Genome Diversity in Bacillus subtilis.

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6.  Genome of a Gut Strain of Bacillus subtilis.

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Review 7.  Diversity of secondary metabolites from marine Bacillus species: chemistry and biological activity.

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8.  Gageostatins A-C, antimicrobial linear lipopeptides from a marine Bacillus subtilis.

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Journal:  Mar Drugs       Date:  2014-01-31       Impact factor: 5.118

  8 in total

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