Literature DB >> 21171573

Does the TauD enzyme always hydroxylate alkanes, while an analogous synthetic non-heme reagent always desaturates them?

Dandamudi Usharani1, Deepa Janardanan, Sason Shaik.   

Abstract

This theoretical work addresses the mechanistic switch between hydroxylase (alcohol formation) and desaturase (olefin formation) activities during alkane oxidation by two non-heme high-valent oxoiron reagents, the enzyme taurine:α-ketoglutarase dioxygenase (TauD) and the synthetic shape-selective catalyst (TpOBzFe), toward cyclohexadiene, cyclohexane, cyclopentane, and ethane. As we show, the desaturase/hydroxylase steps obey unique orbital selection rules, and the mechanistic switch is determined by intrinsic reactivity factors that depend on the ligand-sphere flexibility of the oxoiron species, the substrate, and the spin states of the reaction pathways. Testable predictions are outlined.

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Year:  2010        PMID: 21171573     DOI: 10.1021/ja107339h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Evidence that oxidative dephosphorylation by the nonheme Fe(II), α-ketoglutarate:UMP oxygenase occurs by stereospecific hydroxylation.

Authors:  Anwesha Goswami; Xiaodong Liu; Wenlong Cai; Thomas P Wyche; Tim S Bugni; Maïa Meurillon; Suzanne Peyrottes; Christian Perigaud; Koichi Nonaka; Jürgen Rohr; Steven G Van Lanen
Journal:  FEBS Lett       Date:  2017-01-25       Impact factor: 4.124

Review 2.  Dioxygen activation by nonheme iron enzymes with the 2-His-1-carboxylate facial triad that generate high-valent oxoiron oxidants.

Authors:  Subhasree Kal; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2017-01-10       Impact factor: 3.358

3.  Structural analysis of a phosphonate hydroxylase with an access tunnel at the back of the active site.

Authors:  Changqing Li; Muhammad Junaid; Eman Abdullah Almuqri; Shiguang Hao; Houjin Zhang
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-04-22       Impact factor: 1.056

Review 4.  Mono- and binuclear non-heme iron chemistry from a theoretical perspective.

Authors:  Tibor András Rokob; Jakub Chalupský; Daniel Bím; Prokopis C Andrikopoulos; Martin Srnec; Lubomír Rulíšek
Journal:  J Biol Inorg Chem       Date:  2016-05-26       Impact factor: 3.358

Review 5.  VTST/MT studies of the catalytic mechanism of C-H activation by transition metal complexes with [Cu2(μ-O2)], [Fe2(μ-O2)] and Fe(IV)-O cores based on DFT potential energy surfaces.

Authors:  Yongho Kim; Binh Khanh Mai; Sumin Park
Journal:  J Biol Inorg Chem       Date:  2017-01-16       Impact factor: 3.358

6.  Deciphering the Reaction Pathway of Mononuclear Iron Enzyme-Catalyzed N≡C Triple Bond Formation in Isocyanide Lipopeptide and Polyketide Biosynthesis.

Authors:  Tzu-Yu Chen; Ziyang Zheng; Xuan Zhang; Jinfeng Chen; Lide Cha; Yijie Tang; Yisong Guo; Jiahai Zhou; Binju Wang; Hung-Wen Liu; Wei-Chen Chang
Journal:  ACS Catal       Date:  2022-01-31       Impact factor: 13.700

7.  Intramolecular gas-phase reactions of synthetic nonheme oxoiron(IV) ions: proximity and spin-state reactivity rules.

Authors:  Rubén Mas-Ballesté; Aidan R McDonald; Dana Reed; Dandamudi Usharani; Patric Schyman; Petr Milko; Sason Shaik; Lawrence Que
Journal:  Chemistry       Date:  2012-07-26       Impact factor: 5.236

8.  On how the binding cavity of AsqJ dioxygenase controls the desaturation reaction regioselectivity: a QM/MM study.

Authors:  Zuzanna Wojdyla; Tomasz Borowski
Journal:  J Biol Inorg Chem       Date:  2018-06-06       Impact factor: 3.358

9.  Elucidation of the Fe(IV)=O intermediate in the catalytic cycle of the halogenase SyrB2.

Authors:  Shaun D Wong; Martin Srnec; Megan L Matthews; Lei V Liu; Yeonju Kwak; Kiyoung Park; Caleb B Bell; E Ercan Alp; Jiyong Zhao; Yoshitaka Yoda; Shinji Kitao; Makoto Seto; Carsten Krebs; J Martin Bollinger; Edward I Solomon
Journal:  Nature       Date:  2013-07-18       Impact factor: 49.962

10.  Computational investigation of O2 diffusion through an intra-molecular tunnel in AlkB; influence of polarization on O2 transport.

Authors:  Hedieh Torabifard; G Andrés Cisneros
Journal:  Chem Sci       Date:  2017-07-05       Impact factor: 9.825

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