Literature DB >> 21154239

Quantitative mRNA expression analysis in kidney glomeruli using microdissection techniques.

Ward De Spiegelaere1, Pieter Cornillie, Mario Van Poucke, Luc Peelman, Christian Burvenich, Wim Van den Broeck.   

Abstract

The introduction of new tools for molecular analysis, such as RT-qPCR and microarrays, has provided researchers with powerful applications to study renal disease and development. However, the high cellular heterogeneity of the renal tissue complicates the molecular analysis of specific cells and cell groups such as glomerular or tubular cells. In the past, glomerular sieving and manual dissection were used for the isolation of glomeruli. However, these techniques cannot be used for the isolation of specific glomeruli or for the co-isolation of additional tissue fractions. In recent decades, new microdissection techniques such as laser-assisted microdissection have been developed. These applications allow the isolation of small cell groups from heterogeneous tissue for molecular analysis, including microarray and RT-qPCR. Although very promising, some drawbacks are associated with these techniques. The isolated sample material is generally small and requires sensitive assays. In addition, the long sample processing time may result in a considerable loss of RNA integrity. Careful optimization and rigorous quality analysis should overcome these drawbacks. In the present paper, the recent literature on the application of microdissection techniques in kidney research is reviewed, together with a discussion of the critical issues that are essential for the application of quantitative mRNA expression analysis with RT-qPCR on microdissected samples.

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Year:  2011        PMID: 21154239     DOI: 10.14670/HH-26.267

Source DB:  PubMed          Journal:  Histol Histopathol        ISSN: 0213-3911            Impact factor:   2.303


  10 in total

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Review 3.  The primary glomerulonephritides: a systems biology approach.

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5.  Studying the Pulmonary NEB ME: A Multidisciplinary Approach.

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7.  Biomarkers for Refractory Lupus Nephritis: A Microarray Study of Kidney Tissue.

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8.  Reference gene validation for RT-qPCR, a note on different available software packages.

Authors:  Ward De Spiegelaere; Jutta Dern-Wieloch; Roswitha Weigel; Valérie Schumacher; Hubert Schorle; Daniel Nettersheim; Martin Bergmann; Ralph Brehm; Sabine Kliesch; Linos Vandekerckhove; Cornelia Fink
Journal:  PLoS One       Date:  2015-03-31       Impact factor: 3.240

9.  Recommendations for mRNA analysis of micro-dissected glomerular tufts from paraffin-embedded human kidney biopsy samples.

Authors:  Clemens L Bockmeyer; Juliane Wittig; Karen Säuberlich; Philipp Selhausen; Marc Eßer; Philip Zeuschner; Friedrich Modde; Kerstin Amann; Christoph Daniel
Journal:  BMC Mol Biol       Date:  2018-03-13       Impact factor: 2.946

10.  Laser capture microdissection of intestinal tissue from sea bass larvae using an optimized RNA integrity assay and validated reference genes.

Authors:  M Schaeck; W De Spiegelaere; J De Craene; W Van den Broeck; B De Spiegeleer; C Burvenich; F Haesebrouck; A Decostere
Journal:  Sci Rep       Date:  2016-02-17       Impact factor: 4.379

  10 in total

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