| Literature DB >> 21151564 |
Kpandja Djawe1, Laurence Huang, Kieran R Daly, Linda Levin, Judy Koch, Alexandra Schwartzman, Serena Fong, Brenna Roth, Anuradha Subramanian, Katherine Grieco, Leah Jarlsberg, Peter D Walzer.
Abstract
BACKGROUND: Pneumocystis jirovecii remains an important cause of fatal pneumonia (Pneumocystis pneumonia or PcP) in HIV+ patients and other immunocompromised hosts. Despite many previous attempts, a clinically useful serologic test for P. jirovecii infection has never been developed. METHODS/PRINCIPALEntities:
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Year: 2010 PMID: 21151564 PMCID: PMC3000336 DOI: 10.1371/journal.pone.0014259
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Geometric mean [95% CI] IgG and IgM antibody levels to MsgC1 in cases and controls over time.
*p<0.05 tests the differences in mean values between cases and controls at each time point. † tests in controls only the differences in mean values at week 1–2 compared to baseline and at week 3–4 compared to baseline. These comparisons in cases were not significant. A mixed effect Tobit regression model was written which provided an estimate of the average effect of PcP+ compared to PcP− in each interval. A random effect subject effect was modeled to account for correlation between measurements on the same subject in the same interval. The value of the t-statistics, testing Ho: PcP parameter estimate = 0, was used to judge the statistical significance of the effect of PcP+, compared to PcP−.
Figure 2Geometric mean [95% CI] IgG antibody levels to MsgC1 in cases by history of PcP and CD4+ cell counts over time.
Sensitivity, Specificity, and Positive Predictive Value (PPV) Associated with IgG to MsgC1 Cutpoints at Each Time Interval Comparing PcP Cases and Controls.
| Time | Samples in Cases | Samples in Controls | MsgC1 Cutpoint | Sensitivity | Specificity | PPV |
| Baseline | 180 | 107 | 23 | 57.2 | 61.7 | 71.5 |
| 1–2 weeks | 59 | 27 | 25 | 61.0 | 70.4 | 81.8 |
| 3–4 weeks | 41 | 11 | 40.5 | 63.4 | 100 | 100 |
| 5–6 weeks | 32 | 16 | 20.5 | 53.1 | 56.3 | 70.8 |
Note: We included 110 individual PcP cases and 63 individual controls in this study. Since some patients had their first specimen drawn at the time of hospital admission, but others had it drawn a day after admission, we defined baseline specimen to be specimen drawn on the day of hospital admission (day 0) or the following day after admission (day 1). Some subjects had specimens on both days and this resulted into 180 specimens for cases and 107 sample for controls.
Sensitivity, Specificity, and Positive Predictive Value (PPV) Associated with IgM to MsgC1 Cutpoints at Each Time Interval Comparing PcP Cases and Controls.
| Time | Samples in Cases | Samples in Control | MsgC1 Cutpoint | Sensitivity | Specificity | PPV |
| Baseline | 77 | 31 | 23.49 | 59.7 | 61.3 | 79.3 |
| 1–2 weeks | 77 | 36 | 20.39 | 64.9 | 69.4 | 82.0 |
| 3–4 weeks | 32 | 19 | 20.36 | 74.6 | 73.7 | 89.8 |
Note: We had 110 individual PcP cases and 63 individual controls in this study. Since some patients had their first specimen drawn at the time of hospital admission, but others had it drawn a day after admission, we defined baseline specimen to be specimen drawn on the day of hospital admission (day 0) or the following day after admission (day 1). Some subjects had specimens on both days and this resulted into 77 specimens for cases and 31 sample for controls. There are different numbers of specimens for IgG and IgM in each group because some subjects was not enough for both IgG and IgM antibodies to be tested.