Literature DB >> 21148678

Actinomycetospora rishiriensis sp. nov., isolated from a lichen.

Hideki Yamamura1, Haruna Ashizawa1, Youji Nakagawa1, Moriyuki Hamada2, Yuumi Ishida2, Misa Otoguro2, Tomohiko Tamura2, Masayuki Hayakawa1.   

Abstract

An actinomycete, strain RI109-Li102(T), was isolated from a lichen sample obtained from Rishiri Island in Japan. Cells of strain RI109-Li102(T) were Gram-positive, aerobic and non-motile and formed bud-like spore chains. The isolate grew with 0-3 % (w/v) NaCl, at pH 5-9 and at 10-30 °C (optimum 30 °C). The whole-cell hydrolysate contained meso-diaminopimelic acid, arabinose and galactose. The predominant menaquinone was MK-8(H(4)) and the diagnostic phospholipids were phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol and diphosphatidylglycerol. The major cellular fatty acids were iso-C(16 : 0) and iso-C(16 : 1) H. Comparative 16S rRNA gene sequence analysis revealed that strain RI109-Li102(T) was most closely related to Actinomycetospora corticicola 014-5(T) (99.0 % rRNA gene sequence similarity) and Actinomycetospora chiangmaiensis YIM 0006(T) (98.4 %). However, DNA-DNA hybridization assays, as well as physiological and biochemical analyses, showed that strain RI109-Li102(T) could be differentiated from its closest phylogenetic relatives. It is proposed that strain RI109-Li102(T) ( = NBRC 106356(T) = KCTC 19782(T)) be classified as the type strain of a novel species, with the name Actinomycetospora rishiriensis sp. nov.

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Year:  2010        PMID: 21148678     DOI: 10.1099/ijs.0.028753-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Diversity, Antimicrobial Activity, and Biosynthetic Potential of Cultivable Actinomycetes Associated with Lichen Symbiosis.

Authors:  Chengbin Liu; Yi Jiang; Xinyu Wang; Dongbo Chen; Xiu Chen; Lisong Wang; Li Han; Xueshi Huang; Chenglin Jiang
Journal:  Microb Ecol       Date:  2017-03-30       Impact factor: 4.552

2.  Analysis of airborne microbial communities using 16S ribosomal RNA: Potential bias due to air sampling stress.

Authors:  Huajun Zhen; Valdis Krumins; Donna E Fennell; Gediminas Mainelis
Journal:  Sci Total Environ       Date:  2017-11-01       Impact factor: 7.963

3.  Microbial community overlap between the phyllosphere and rhizosphere of three plants from Yongxing Island, South China Sea.

Authors:  Lijun Bao; Wenyang Cai; Jianxi Cao; Xiaofen Zhang; Jinhong Liu; Hao Chen; Yuansong Wei; Xuliang Zhuang; Guoqiang Zhuang; Zhihui Bai
Journal:  Microbiologyopen       Date:  2020-04-21       Impact factor: 3.139

4.  Temporal patterns in Ixodes ricinus microbial communities: an insight into tick-borne microbe interactions.

Authors:  E Lejal; J Chiquet; J Aubert; S Robin; A Estrada-Peña; O Rue; C Midoux; M Mariadassou; X Bailly; A Cougoul; P Gasqui; J F Cosson; K Chalvet-Monfray; M Vayssier-Taussat; T Pollet
Journal:  Microbiome       Date:  2021-07-03       Impact factor: 14.650

  4 in total

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