Literature DB >> 2114317

An efficient NMR approach for obtaining sequence-specific resonance assignments of larger proteins based on multiple isotopic labeling.

M Ikura1, M Krinks, D A Torchia, A Bax.   

Abstract

By simultaneously incorporating in a protein 13C-carbonyl- and 15N-labeled amino acids with different levels of enrichment, characteristics asymmetric doublet-like patterns are observed for 15N nuclei that are directly adjacent to the 13C1-labeled residues, providing unambiguous identification of a large number of unique dipeptide fragments of the protein. Additional assignments and qualitative structural information can be obtained from such a selectively labeled protein by recording multiple bond correlation spectra. The procedure is demonstrated for the protein calmodulin, complexed with calcium.

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Year:  1990        PMID: 2114317     DOI: 10.1016/0014-5793(90)81528-v

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  14 in total

Review 1.  Nuclear magnetic resonance of membrane-associated peptides and proteins.

Authors:  S J Opella; C Ma; F M Marassi
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

Review 2.  Utilizing NMR to study the structure of growth-inhibitory proteins.

Authors:  Francesca Marassi
Journal:  Methods Mol Biol       Date:  2003

3.  Solution conformation and dynamics of the HIV-1 integrase core domain.

Authors:  Nicholas C Fitzkee; James E Masse; Yang Shen; David R Davies; Ad Bax
Journal:  J Biol Chem       Date:  2010-04-01       Impact factor: 5.157

4.  PEP-19, an intrinsically disordered regulator of calmodulin signaling.

Authors:  Quinn K Kleerekoper; John A Putkey
Journal:  J Biol Chem       Date:  2008-12-23       Impact factor: 5.157

5.  Human eIF5 and eIF1A Compete for Binding to eIF5B.

Authors:  Kai Ying Lin; Nabanita Nag; Tatyana V Pestova; Assen Marintchev
Journal:  Biochemistry       Date:  2018-09-26       Impact factor: 3.162

6.  Triple resonance three-dimensional protein NMR: before it became a black box.

Authors:  Ad Bax
Journal:  J Magn Reson       Date:  2011-08-31       Impact factor: 2.229

7.  A novel strategy for NMR resonance assignment and protein structure determination.

Authors:  Alexander Lemak; Aleksandras Gutmanas; Seth Chitayat; Murthy Karra; Christophe Farès; Maria Sunnerhagen; Cheryl H Arrowsmith
Journal:  J Biomol NMR       Date:  2010-12-14       Impact factor: 2.835

8.  Production in two-liter beverage bottles of proteins for NMR structure determination labeled with either 15N- or 13C-15N.

Authors:  Qin Zhao; Ronnie Frederick; Kory Seder; Sandy Thao; Hassan Sreenath; Francis Peterson; Brian F Volkman; John L Markley; Brian G Fox
Journal:  J Struct Funct Genomics       Date:  2004

9.  Sequence-specific 1H and 15N resonance assignments and secondary structure of GDP-bound human c-Ha-Ras protein in solution.

Authors:  Y Muto; K Yamasaki; Y Ito; S Yajima; H Masaki; T Uozumi; M Wälchli; S Nishimura; T Miyazawa; S Yokoyama
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

10.  Protein signal assignments using specific labeling and cell-free synthesis.

Authors:  Jianxia Shi; Jeffrey G Pelton; Ho S Cho; David E Wemmer
Journal:  J Biomol NMR       Date:  2004-03       Impact factor: 2.835

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