Literature DB >> 21143120

Recent advances in DAPYs and related analogues as HIV-1 NNRTIs.

Xuwang Chen1, Peng Zhan, Dongyue Li, Erik De Clercq, Xinyong Liu.   

Abstract

HIV-1 non-nucleoside reverse transcriptase inhibitors (NNRTIs) nowadays represent most promising anti-AIDS drugs that specifically inhibit HIV-1 reverse transcriptase (RT). They have a unique antiviral potency, high specificity and low cytotoxicity. However, to a great extent, the efficacy of HIV-1 NNRTIs is compounded by rapid emergence of drug resistant virus strains, which calls for continuous efforts to develop novel HIV-1 NNRTIs. Diarylpyrimidine (DAPY) derivatives, one family of NNRTIs with superior activity profiles against wild-type HIV-1 and mutant strains, have attracted considerable attention over the past few years. Among the potent lead DAPY compounds, etravirine was approved by FDA in January 2008, and its analogue rilpivirine (TMC278) has advanced to phase III clinical trials. The successful development of DAPYs results from a multidisciplinary approach involving traditional medicinal chemistry, structural biology, crystallography and computational chemistry. Recently, a number of novel characteristics of DAPYs including conformational flexibility, positional adaptability, key hydrogen bonds and specifically targeting conserved residues of RT, have been identified, providing valuable avenues for further optimization and development of new DAPY analogues as promising anti-HIV drug candidates. In this review, we first present a brief historical account of the medicinal chemistry of the DAPY NNRTIs, then focus on the extensive structural modifications, SAR studies, and binding mode analysis based on crystallographic and molecular modeling. Other structural related NNRTI scaffolds will also be reviewed.

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Year:  2011        PMID: 21143120     DOI: 10.2174/092986711794839142

Source DB:  PubMed          Journal:  Curr Med Chem        ISSN: 0929-8673            Impact factor:   4.530


  12 in total

1.  Double Variational Binding--(SMILES) Conformational Analysis by Docking Mechanisms for Anti-HIV Pyrimidine Ligands.

Authors:  Mihai V Putz; Nicoleta A Dudaș; Adriana Isvoran
Journal:  Int J Mol Sci       Date:  2015-08-18       Impact factor: 5.923

2.  Discovery of Phenylaminopyridine Derivatives as Novel HIV-1 Non-nucleoside Reverse Transcriptase Inhibitors.

Authors:  Junwon Kim; Doohyun Lee; Changmin Park; Wonyoung So; Mina Jo; Taedong Ok; Jeongjin Kwon; Sunju Kong; Suyeon Jo; Youngmi Kim; Jihyun Choi; Hyoung Cheul Kim; Yoonae Ko; Inhee Choi; Youngsam Park; Jaewan Yoon; Moon Kyeong Ju; Junghwan Kim; Sung-Jun Han; Tae-Hee Kim; Jonathan Cechetto; Jiyoun Nam; Peter Sommer; Michel Liuzzi; Jinhwa Lee; Zaesung No
Journal:  ACS Med Chem Lett       Date:  2012-07-11       Impact factor: 4.345

3.  Further Exploring Solvent-Exposed Tolerant Regions of Allosteric Binding Pocket for Novel HIV-1 NNRTIs Discovery.

Authors:  Dongwei Kang; Zhao Wang; Heng Zhang; Gaochan Wu; Tong Zhao; Zhongxia Zhou; Zhipeng Huo; Boshi Huang; Da Feng; Xiao Ding; Jian Zhang; Xiaofang Zuo; Lanlan Jing; Wei Luo; Samuel Guma; Dirk Daelemans; Erik De Clercq; Christophe Pannecouque; Peng Zhan; Xinyong Liu
Journal:  ACS Med Chem Lett       Date:  2018-03-01       Impact factor: 4.345

4.  Targeting the entrance channel of NNIBP: Discovery of diarylnicotinamide 1,4-disubstituted 1,2,3-triazoles as novel HIV-1 NNRTIs with high potency against wild-type and E138K mutant virus.

Authors:  Ye Tian; Zhaoqiang Liu; Jinghan Liu; Boshi Huang; Dongwei Kang; Heng Zhang; Erik De Clercq; Dirk Daelemans; Christophe Pannecouque; Kuo-Hsiung Lee; Chin-Ho Chen; Peng Zhan; Xinyong Liu
Journal:  Eur J Med Chem       Date:  2018-03-23       Impact factor: 6.514

5.  Introducing catastrophe-QSAR. Application on modeling molecular mechanisms of pyridinone derivative-type HIV non-nucleoside reverse transcriptase inhibitors.

Authors:  Mihai V Putz; Marius Lazea; Ana-Maria Putz; Corina Duda-Seiman
Journal:  Int J Mol Sci       Date:  2011-12-20       Impact factor: 5.923

6.  What do docking and QSAR tell us about the design of HIV-1 reverse transcriptase nonnucleoside inhibitors?

Authors:  Agata Paneth; Wojciech Płonka; Piotr Paneth
Journal:  J Mol Model       Date:  2017-10-19       Impact factor: 1.810

7.  A comparison of the ability of rilpivirine (TMC278) and selected analogues to inhibit clinically relevant HIV-1 reverse transcriptase mutants.

Authors:  Barry C Johnson; Gary T Pauly; Ganesha Rai; Disha Patel; Joseph D Bauman; Heather L Baker; Kalyan Das; Joel P Schneider; David J Maloney; Eddy Arnold; Craig J Thomas; Stephen H Hughes
Journal:  Retrovirology       Date:  2012-12-05       Impact factor: 4.602

8.  Application of 3D-QSAR, Pharmacophore, and Molecular Docking in the Molecular Design of Diarylpyrimidine Derivatives as HIV-1 Nonnucleoside Reverse Transcriptase Inhibitors.

Authors:  Genyan Liu; Wenjie Wang; Youlan Wan; Xiulian Ju; Shuangxi Gu
Journal:  Int J Mol Sci       Date:  2018-05-11       Impact factor: 5.923

9.  Pyrimidine 2,4-Diones in the Design of New HIV RT Inhibitors.

Authors:  Roberto Romeo; Daniela Iannazzo; Lucia Veltri; Bartolo Gabriele; Beatrice Macchi; Caterina Frezza; Francesca Marino-Merlo; Salvatore V Giofrè
Journal:  Molecules       Date:  2019-05-02       Impact factor: 4.411

10.  In silico Design of Novel HIV-1 NNRTIs Based on Combined Modeling Studies of Dihydrofuro[3,4-d]pyrimidines.

Authors:  Yanming Chen; Yafeng Tian; Ya Gao; Fengshou Wu; Xiaogang Luo; Xiulian Ju; Genyan Liu
Journal:  Front Chem       Date:  2020-03-24       Impact factor: 5.221

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