Literature DB >> 21133350

Identification of novel proteins from the venom of a cryptic snake Drysdalia coronoides by a combined transcriptomics and proteomics approach.

Shifali Tiwari Chatrath1, Alex Chapeaurouge, Qingsong Lin, Teck Kwang Lim, Nathan Dunstan, Peter Mirtschin, Prakash P Kumar, R Manjunatha Kini.   

Abstract

We have investigated the transcriptome and proteome of the venom of a cryptic Australian elapid snake Drysdalia coronoides. To probe into the transcriptome, we constructed a partial cDNA library from the venom gland of D. coronoides. The proteome of the venom of D. coronoides was explored by tryptic digestion of the crude venom followed by HPLC separation of the resulting peptides and MALDI-TOF/TOF mass spectrometric analysis. Importantly, the tandem MS data of the tryptic peptides of the venom not only confirmed the predicted protein sequences deduced from the transcriptome, but also added to our knowledge about the venom composition through identification of two more toxin families. Using both the approaches, we were able to identify proteins belonging to eight different snake venom protein superfamilies, namely, three-finger toxins, serine protease inhibitors, cysteine rich secretory proteins, phospholipases A(2), venom nerve growth factors, snake venom metalloproteases, vespryns, and a new family phospholipase B. We also identified three novel proteins belonging to the three-finger toxin superfamily.

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Year:  2011        PMID: 21133350     DOI: 10.1021/pr1008916

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  16 in total

1.  Are there unequivocal criteria to label a given protein as a toxin? Permissive versus conservative annotation processes.

Authors:  Yves Terrat; Frédéric Ducancel
Journal:  Genome Biol       Date:  2013       Impact factor: 13.583

2.  Identification of hyaluronidase and phospholipase B in Lachesis muta rhombeata venom.

Authors:  Gisele A Wiezel; Patty K dos Santos; Francielle A Cordeiro; Karla C F Bordon; Heloisa S Selistre-de-Araújo; Beatrix Ueberheide; Eliane C Arantes
Journal:  Toxicon       Date:  2015-08-31       Impact factor: 3.033

3.  Venom-gland transcriptome and venom proteome of the Malaysian king cobra (Ophiophagus hannah).

Authors:  Choo Hock Tan; Kae Yi Tan; Shin Yee Fung; Nget Hong Tan
Journal:  BMC Genomics       Date:  2015-09-10       Impact factor: 3.969

Review 4.  Protease inhibitors from marine venomous animals and their counterparts in terrestrial venomous animals.

Authors:  Caroline B F Mourão; Elisabeth F Schwartz
Journal:  Mar Drugs       Date:  2013-06-14       Impact factor: 5.118

Review 5.  Computational Studies of Snake Venom Toxins.

Authors:  Paola G Ojeda; David Ramírez; Jans Alzate-Morales; Julio Caballero; Quentin Kaas; Wendy González
Journal:  Toxins (Basel)       Date:  2017-12-22       Impact factor: 4.546

6.  Modern trends in animal venom research - omics and nanomaterials.

Authors:  Yuri N Utkin
Journal:  World J Biol Chem       Date:  2017-02-26

Review 7.  Venom-Derived Neurotoxins Targeting Nicotinic Acetylcholine Receptors.

Authors:  Ayaulym Bekbossynova; Albina Zharylgap; Olena Filchakova
Journal:  Molecules       Date:  2021-06-03       Impact factor: 4.411

8.  Interrogating the Venom of the Viperid Snake Sistrurus catenatus edwardsii by a Combined Approach of Electrospray and MALDI Mass Spectrometry.

Authors:  Alex Chapeaurouge; Md Abu Reza; Stephen P Mackessy; Paulo C Carvalho; Richard H Valente; André Teixeira-Ferreira; Jonas Perales; Qingsong Lin; R Manjunatha Kini
Journal:  PLoS One       Date:  2015-05-08       Impact factor: 3.240

9.  Quantitative high-throughput profiling of snake venom gland transcriptomes and proteomes (Ovophis okinavensis and Protobothrops flavoviridis).

Authors:  Steven D Aird; Yutaka Watanabe; Alejandro Villar-Briones; Michael C Roy; Kouki Terada; Alexander S Mikheyev
Journal:  BMC Genomics       Date:  2013-11-14       Impact factor: 3.969

10.  Full-Length Venom Protein cDNA Sequences from Venom-Derived mRNA: Exploring Compositional Variation and Adaptive Multigene Evolution.

Authors:  Cassandra M Modahl; Stephen P Mackessy
Journal:  PLoS Negl Trop Dis       Date:  2016-06-09
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