Literature DB >> 21131522

Characterization of a novel beta-xylosidase, XylC, from Thermoanaerobacterium saccharolyticum JW/SL-YS485.

Weilan Shao1, Yemin Xue, Ailian Wu, Irina Kataeva, Jianjun Pei, Huawei Wu, Juergen Wiegel.   

Abstract

The 1,914-bp open reading frame of xylC from Thermoanaerobacterium saccharolyticum JW/SL-YS485 encodes a calculated 73-kDa β-xylosidase, XylC, different from any glycosyl hydrolase in the database and representing a novel glycohydrolase family. Hydrolysis occurred under retention of the anomeric configuration, and transglycosylation occurred in the presence of alcohols as acceptors. With the use of vector pHsh, expression of XylC, the third β-xylosidase in this bacterium, increased approximately 4-fold when a loop within the translational initiation region in the mRNA was removed by site-directed mutagenesis. The increased expression of xylC(m) is due to removal of a stem-loop structure without a change of the amino acid sequence of the heterologously expressed enzyme (XylC(rec)). When gel filtration was applied, purified XylC had molecular masses of 210 kDa and 265 kDa using native gradient gel electrophoresis. The protein consisted of 78-kDa subunits based on SDS gel electrophoresis and contained 6% carbohydrates. XylC and XylC(rec) exhibited maximum activity at 65°C and pH(65°C) 6.0, a 1-h half-life at 67°C, a K(m) for p-nitrophenyl-β-D-xyloside of 28 mM, and a V(max) of 276 U/mg and retained 70% activity in the presence of 200 mM xylose, suggesting potential for industrial applications.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21131522      PMCID: PMC3028745          DOI: 10.1128/AEM.01511-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  27 in total

1.  The structure of an inverting GH43 beta-xylosidase from Geobacillus stearothermophilus with its substrate reveals the role of the three catalytic residues.

Authors:  Christian Brüx; Alon Ben-David; Dalia Shallom-Shezifi; Maya Leon; Karsten Niefind; Gil Shoham; Yuval Shoham; Dietmar Schomburg
Journal:  J Mol Biol       Date:  2006-03-20       Impact factor: 5.469

2.  Evolutionary and mechanistic relationships between glycosidases acting on alpha- and beta-bonds.

Authors:  Mark R Stam; Eric Blanc; Pedro M Coutinho; Bernard Henrissat
Journal:  Carbohydr Res       Date:  2005-10-13       Impact factor: 2.104

3.  Isolation and characterization of a thermostable beta-xylosidase in the thermophilic bacterium Geobacillus pallidus.

Authors:  Denny Quintero; Zoraida Velasco; Estefanía Hurtado-Gómez; José L Neira; Lellys M Contreras
Journal:  Biochim Biophys Acta       Date:  2007-02-13

Review 4.  Anaerobic alkalithermophiles, a novel group of extremophiles.

Authors:  J Wiegel
Journal:  Extremophiles       Date:  1998-08       Impact factor: 2.395

5.  Isolation, analysis, and expression of two genes from Thermoanaerobacterium sp. strain JW/SL YS485: a beta-xylosidase and a novel acetyl xylan esterase with cephalosporin C deacetylase activity.

Authors:  W W Lorenz; J Wiegel
Journal:  J Bacteriol       Date:  1997-09       Impact factor: 3.490

6.  Cloning, sequencing, and characterization of the bifunctional xylosidase-arabinosidase from the anaerobic thermophile thermoanaerobacter ethanolicus.

Authors:  V Mai; J Wiegel; W W Lorenz
Journal:  Gene       Date:  2000-04-18       Impact factor: 3.688

7.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

8.  Purification and properties of an aryl beta-xylosidase from a cellulolytic extreme thermophile expressed in Escherichia coli.

Authors:  R C Hudson; L R Schofield; T Coolbear; R M Daniel; H W Morgan
Journal:  Biochem J       Date:  1991-02-01       Impact factor: 3.857

9.  A High-Molecular-Weight, Cell-Associated Xylanase Isolated from Exponentially Growing Thermoanaerobacterium sp. Strain JW/SL-YS485.

Authors:  W Shao; S Deblois; J Wiegel
Journal:  Appl Environ Microbiol       Date:  1995-03       Impact factor: 4.792

10.  A xylose-tolerant beta-xylosidase from Paecilomyces thermophila: characterization and its co-action with the endogenous xylanase.

Authors:  Q J Yan; L Wang; Z Q Jiang; S Q Yang; H F Zhu; L T Li
Journal:  Bioresour Technol       Date:  2008-01-03       Impact factor: 9.642

View more
  22 in total

1.  GH52 xylosidase from Geobacillus stearothermophilus: characterization and introduction of xylanase activity by site‑directed mutagenesis of Tyr509.

Authors:  Zongqing Huang; Xiaoshuang Liu; Shaowei Zhang; Ziduo Liu
Journal:  J Ind Microbiol Biotechnol       Date:  2014-01       Impact factor: 3.346

2.  Crystallization and preliminary X-ray diffraction analysis of a novel GH120 β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485.

Authors:  Wenting Liu; Yu Sun; Tzu-Ping Ko; Juergen Wiegel; Weilan Shao; Fuping Lu; Rey-Ting Guo; Chun-Hsiang Huang
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-07-31

3.  The cloning, expression, purification, characterization and modeled structure of Caulobacter crescentus β-Xylosidase I.

Authors:  Luciana Graciano; Juliana Moço Corrêa; Rinaldo Ferreira Gandra; Flavio Augusto Vicente Seixas; Marina Kimiko Kadowaki; Silvio César Sampaio; José Luis da Conceição Silva; Clarice Aoki Osaku; Rita de Cássia Garcia Simão
Journal:  World J Microbiol Biotechnol       Date:  2012-06-22       Impact factor: 3.312

4.  Characterization of xylan utilization and discovery of a new endoxylanase in Thermoanaerobacterium saccharolyticum through targeted gene deletions.

Authors:  Kara K Podkaminer; Adam M Guss; Heather L Trajano; David A Hogsett; Lee R Lynd
Journal:  Appl Environ Microbiol       Date:  2012-09-28       Impact factor: 4.792

5.  Functional Characterization of Corynebacterium alkanolyticum β-Xylosidase and Xyloside ABC Transporter in Corynebacterium glutamicum.

Authors:  Akira Watanabe; Kazumi Hiraga; Masako Suda; Hideaki Yukawa; Masayuki Inui
Journal:  Appl Environ Microbiol       Date:  2015-04-10       Impact factor: 4.792

6.  Distinct actions by Paenibacillus sp. strain E18 α-L-arabinofuranosidases and xylanase in xylan degradation.

Authors:  Pengjun Shi; Xiaoyan Chen; Kun Meng; Huoqing Huang; Yingguo Bai; Huiying Luo; Peilong Yang; Bin Yao
Journal:  Appl Environ Microbiol       Date:  2013-01-18       Impact factor: 4.792

7.  Cloning and characterization of the glycoside hydrolases that remove xylosyl groups from 7-β-xylosyl-10-deacetyltaxol and its analogues.

Authors:  Hai-Li Cheng; Rui-Yu Zhao; Tian-Jiao Chen; Wen-Bo Yu; Fen Wang; Ke-Di Cheng; Ping Zhu
Journal:  Mol Cell Proteomics       Date:  2013-05-10       Impact factor: 5.911

8.  Cloning, expression and characterization of C. crescentus xynA2 gene and application of Xylanase II in the deconstruction of plant biomass.

Authors:  Débora Jacomini; Larissa Bussler; Juliana Moço Corrêa; Marina Kimiko Kadowaki; Alexandre Maller; José Luis da-Conceição Silva; Rita de Cássia Garcia Simão
Journal:  Mol Biol Rep       Date:  2020-05-18       Impact factor: 2.316

9.  The substrate/product-binding modes of a novel GH120 β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485.

Authors:  Chun-Hsiang Huang; Yu Sun; Tzu-Ping Ko; Chun-Chi Chen; Yingying Zheng; Hsiu-Chien Chan; Xuefei Pang; Juergen Wiegel; Weilan Shao; Rey-Ting Guo
Journal:  Biochem J       Date:  2012-12-15       Impact factor: 3.857

10.  Biochemical properties of a novel thermostable and highly xylose-tolerant β-xylosidase/α-arabinosidase from Thermotoga thermarum.

Authors:  Hao Shi; Xun Li; Huaxiang Gu; Yu Zhang; Yingjuan Huang; Liangliang Wang; Fei Wang
Journal:  Biotechnol Biofuels       Date:  2013-02-20       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.