Literature DB >> 21131493

Genome sequence of an Erwinia amylovora strain with pathogenicity restricted to Rubus plants.

Rachel Powney1, Theo H M Smits, Tim Sawbridge, Beatrice Frey, Jochen Blom, Jürg E Frey, Kim M Plummer, Steven V Beer, Joanne Luck, Brion Duffy, Brendan Rodoni.   

Abstract

Here, we present the genome of a strain of Erwinia amylovora, the fire blight pathogen, with pathogenicity restricted to Rubus spp. Comparative genomics of ATCC BAA-2158 with E. amylovora strains from non-Rubus hosts identified significant genetic differences but support the inclusion of this strain within the species E. amylovora.

Entities:  

Mesh：

Substances：

Year:  2010        PMID： 21131493      PMCID： PMC3021219          DOI： 10.1128/JB.01352-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Complete genome sequence of the plant pathogen Erwinia amylovora strain ATCC 49946.

Authors:  M Sebaihia; A M Bocsanczy; B S Biehl; M A Quail; N T Perna; J D Glasner; G A DeClerck; S Cartinhour; D J Schneider; S D Bentley; J Parkhill; S V Beer
Journal:  J Bacteriol       Date:  2010-01-29       Impact factor: 3.490

3.  Complete nucleotide sequence of ubiquitous plasmid pEA29 from Erwinia amylovora strain Ea88: gene organization and intraspecies variation.

Authors:  G C McGhee; A L Jones
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

4.  Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp.

Authors:  Theo H M Smits; Fabio Rezzonico; Tim Kamber; Jochen Blom; Alexander Goesmann; Jürg E Frey; Brion Duffy
Journal:  Mol Plant Microbe Interact       Date:  2010-04       Impact factor: 4.171

5.  Erwinia tasmaniensis sp. nov., a non-phytopathogenic bacterium from apple and pear trees.

Authors:  Klaus Geider; Georg Auling; Zhiqiang Du; Vladimir Jakovljevic; Susanne Jock; Beate Völksch
Journal:  Int J Syst Evol Microbiol       Date:  2006-12       Impact factor: 2.747

6.  Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae.

Authors:  Michael Kube; Alexander M Migdoll; Isabel Gehring; Katja Heitmann; Yvonne Mayer; Heiner Kuhl; Florian Knaust; Klaus Geider; Richard Reinhardt
Journal:  BMC Genomics       Date:  2010-06-22       Impact factor: 3.969

7.  The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic bacterium in the genus Erwinia.

Authors:  Michael Kube; Alexander Michael Migdoll; Ines Müller; Heiner Kuhl; Alfred Beck; Richard Reinhardt; Klaus Geider
Journal:  Environ Microbiol       Date:  2008-05-06       Impact factor: 5.491

8.  Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.

Authors:  Theo H M Smits; Sebastian Jaenicke; Fabio Rezzonico; Tim Kamber; Alexander Goesmann; Jürg E Frey; Brion Duffy
Journal:  BMC Genomics       Date:  2010-01-04       Impact factor: 3.969

9.  Relatedness of chromosomal and plasmid DNAs of Erwinia pyrifoliae and Erwinia amylovora.

Authors:  Gayle C McGhee; Elise L Schnabel; Kimberly Maxson-Stein; Beatrix Jones; Verlyn K Stromberg; George H Lacy; Alan L Jones
Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

10.  EDGAR: a software framework for the comparative analysis of prokaryotic genomes.

Authors:  Jochen Blom; Stefan P Albaum; Daniel Doppmeier; Alfred Pühler; Frank-Jörg Vorhölter; Martha Zakrzewski; Alexander Goesmann
Journal:  BMC Bioinformatics       Date:  2009-05-20       Impact factor: 3.169
  10 in total
  14 in total

1.  A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation.

Authors:  Jingwei Jiang; Jun Li; Hoi Shan Kwan; Chun Hang Au; Patrick Tik Wan Law; Lei Li; Kai Man Kam; Julia Mei Lun Ling; Frederick C Leung
Journal:  BMC Res Notes       Date:  2012-01-31

2.  Diversity, evolution, and functionality of clustered regularly interspaced short palindromic repeat (CRISPR) regions in the fire blight pathogen Erwinia amylovora.

Authors:  Fabio Rezzonico; Theo H M Smits; Brion Duffy
Journal:  Appl Environ Microbiol       Date:  2011-04-01       Impact factor: 4.792

3.  Genome sequence of Pectobacterium carotovorum subsp. carotovorum strain PCC21, a pathogen causing soft rot in Chinese cabbage.

Authors:  Tae-Ho Park; Beom-Soon Choi; Ah-Young Choi; Ik-Young Choi; Sunggi Heu; Beom-Seok Park
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

4.  Phylogenetic classification of diverse LysR-type transcriptional regulators of a model prokaryote Geobacter sulfurreducens.

Authors:  Julia Krushkal; Yanhua Qu; Derek R Lovley; Ronald M Adkins
Journal:  J Mol Evol       Date:  2012-04-20       Impact factor: 2.395

5.  The xylem as battleground for plant hosts and vascular wilt pathogens.

Authors:  Koste A Yadeta; Bart P H J Thomma
Journal:  Front Plant Sci       Date:  2013-04-23       Impact factor: 5.753

6.  Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.

Authors:  Fabio Rezzonico; Andrea Braun-Kiewnick; Rachel A Mann; Brendan Rodoni; Alexander Goesmann; Brion Duffy; Theo H M Smits
Journal:  Mol Plant Pathol       Date:  2012-05-15       Impact factor: 5.663

7.  Erwinia amylovora novel plasmid pEI70: complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen.

Authors:  Pablo Llop; Jordi Cabrefiga; Theo H M Smits; Tanja Dreo; Silvia Barbé; Joanna Pulawska; Alain Bultreys; Jochen Blom; Brion Duffy; Emilio Montesinos; María M López
Journal:  PLoS One       Date:  2011-12-09       Impact factor: 3.240

Review 8.  Functions and origin of plasmids in Erwinia species that are pathogenic to or epiphytically associated with pome fruit trees.

Authors:  Pablo Llop; Silvia Barbé; María M López
Journal:  Trees (Berl West)       Date:  2011-10-11       Impact factor: 2.529

9.  Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved core.

Authors:  Rachel A Mann; Theo H M Smits; Andreas Bühlmann; Jochen Blom; Alexander Goesmann; Jürg E Frey; Kim M Plummer; Steven V Beer; Joanne Luck; Brion Duffy; Brendan Rodoni
Journal:  PLoS One       Date:  2013-02-07       Impact factor: 3.240

10.  Erwinia amylovora CRISPR elements provide new tools for evaluating strain diversity and for microbial source tracking.

Authors:  Gayle C McGhee; George W Sundin
Journal:  PLoS One       Date:  2012-07-31       Impact factor: 3.240
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.