| Literature DB >> 21122235 |
Dalit Talmi-Frank1, Noa Kedem-Vaanunu, Roni King, Gila Kahila Bar-Gal, Nir Edery, Charles L Jaffe, Gad Baneth.
Abstract
During a survey of wild canids, internal transcribed spacer 1 real-time PCR and high-resolution melt analysis identified Leishmania tropica in samples from jackals and foxes. Infection was most prevalent in ear and spleen samples. Jackals and foxes may play a role in the spread of zoonotic L. tropica.Entities:
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Year: 2010 PMID: 21122235 PMCID: PMC3294571 DOI: 10.3201/eid1612.100953
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Sequence similarity obtained for Leishmania spp. ITS1-positive tissue samples from jackals and foxes, Israel*
| Subject no. | Animal species | Tissue | HRM results | ITS1 sequence length (% similarity†) | GenBank accession nos. | |
|---|---|---|---|---|---|---|
| Comparison isolate | Identified isolate | |||||
| 918 | Jackal | Right ear, left ear |
| 236–239 bp (98) | FJ948456 | GU591390 |
| 922 | Jackal | Right ear, left ear |
| 235–239 bp (98) | FJ948456 | GU591391 |
| 1067 | Jackal | Right ear, spleen |
| 233–237 bp (98) | FJ948456 | GU591392 |
| 1086 | Jackal | Right ear, spleen |
| 234–238 bp (98) | FJ948456 | GU591393 |
| 1380 | Jackal | Spleen |
| 235–239 bp (98) | FJ948456 | GU591394 |
| 115 | Jackal | Blood |
| 221–222 bp (99) | GU045592 | GU591395 |
| 1084 | Fox | Right ear, snout, spleen |
| 234–239 bp (98) | FJ948456 | GU591396 |
| 579916 | Fox | Left ear |
| 235–239 bp (98) | FJ9484556 | GU591397 |
*ITS1, internal transcribed spacer 1; HRM, high-resolution melt analysis. †Similarity to comparison isolate by BLAST (www.ncbi.nlm.nih.gov/BLAST).
FigureNeighbor-joining tree phylogram comparing internal transcribed spacer 1 (ITS1) Leishmania tropica DNA sequences from wild canids, Israel. The neighbor-joining tree constructed in MEGA version 3.0 (www.megasoftware.net) by the ITS1 HRM PCR sequences (222–239 nt) agrees with the maximum-likelihood algorithm. The tree shown is based on the Kimura 2-parameter model of nucleotide substitution. Bootstrap values are based on 1,000 replicates. The analysis provided tree topology only; the lengths of the vertical and horizontal lines are not significant. L. major was used as an outgroup. GenBank accession numbers of L. tropica from hyraxes deposited from this study are shown in brackets. Numbers on nodes represent bootstrap values. MHOM, human; IARA, Phlebotomus arabicus sand fly; ISER, Phlebotomus sergenti sandfly.