Literature DB >> 21116705

Globin gene structure in a reptile supports the transpositional model for amniote α- and β-globin gene evolution.

Vidushi S Patel1, Tariq Ezaz, Janine E Deakin, Jennifer A Marshall Graves.   

Abstract

The haemoglobin protein, required for oxygen transportation in the body, is encoded by α- and β-globin genes that are arranged in clusters. The transpositional model for the evolution of distinct α-globin and β-globin clusters in amniotes is much simpler than the previously proposed whole genome duplication model. According to this model, all jawed vertebrates share one ancient region containing α- and β-globin genes and several flanking genes in the order MPG-C16orf35-(α-β)-GBY-LUC7L that has been conserved for more than 410 million years, whereas amniotes evolved a distinct β-globin cluster by insertion of a transposed β-globin gene from this ancient region into a cluster of olfactory receptors flanked by CCKBR and RRM1. It could not be determined whether this organisation is conserved in all amniotes because of the paucity of information from non-avian reptiles. To fill in this gap, we examined globin gene organisation in a squamate reptile, the Australian bearded dragon lizard, Pogona vitticeps (Agamidae). We report here that the α-globin cluster (HBK, HBA) is flanked by C16orf35 and GBY and is located on a pair of microchromosomes, whereas the β-globin cluster is flanked by RRM1 on the 3' end and is located on the long arm of chromosome 3. However, the CCKBR gene that flanks the β-globin cluster on the 5' end in other amniotes is located on the short arm of chromosome 5 in P. vitticeps, indicating that a chromosomal break between the β-globin cluster and CCKBR occurred at least in the agamid lineage. Our data from a reptile species provide further evidence to support the transpositional model for the evolution of β-globin gene cluster in amniotes.

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Year:  2010        PMID: 21116705     DOI: 10.1007/s10577-010-9164-5

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  35 in total

1.  Conservation of sequence and structure flanking the mouse and human beta-globin loci: the beta-globin genes are embedded within an array of odorant receptor genes.

Authors:  M Bulger; J H van Doorninck; N Saitoh; A Telling; C Farrell; M A Bender; G Felsenfeld; R Axel; M Groudine; J H von Doorninck
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  Evolutionary rate variation among vertebrate beta globin genes: implications for dating gene family duplication events.

Authors:  Gabriela Aguileta; Joseph P Bielawski; Ziheng Yang
Journal:  Gene       Date:  2006-05-04       Impact factor: 3.688

3.  Genomic evidence for independent origins of beta-like globin genes in monotremes and therian mammals.

Authors:  Juan C Opazo; Federico G Hoffmann; Jay F Storz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

4.  Phylogenetic analysis of reptilian hemoglobins: trees, rates, and divergences.

Authors:  T A Gorr; B K Mable; T Kleinschmidt
Journal:  J Mol Evol       Date:  1998-10       Impact factor: 2.395

5.  Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues.

Authors:  Thorsten Burmester; Bettina Ebner; Bettina Weich; Thomas Hankeln
Journal:  Mol Biol Evol       Date:  2002-04       Impact factor: 16.240

6.  Characterization of adult alpha- and beta-globin genes in the zebrafish.

Authors:  F Y Chan; J Robinson; A Brownlie; R A Shivdasani; A Donovan; C Brugnara; J Kim; B C Lau; H E Witkowska; L I Zon
Journal:  Blood       Date:  1997-01-15       Impact factor: 22.113

7.  The amphibian globin gene repertoire as revealed by the Xenopus genome.

Authors:  C Fuchs; T Burmester; T Hankeln
Journal:  Cytogenet Genome Res       Date:  2006       Impact factor: 1.636

8.  Functional and comparative analysis of globin loci in pufferfish and humans.

Authors:  Nynke Gillemans; Tara McMorrow; Rita Tewari; Albert W K Wai; Carola Burgtorf; Dubravka Drabek; Nicki Ventress; An Langeveld; Douglas Higgs; Kian Tan-Un; Frank Grosveld; Sjaak Philipsen
Journal:  Blood       Date:  2002-11-27       Impact factor: 22.113

9.  Embryonic globins of the marsupial the Tammar Wallaby (Macropus eugenii): bird like and mammal like.

Authors:  R A Holland; A A Gooley; R M Hope
Journal:  Clin Exp Pharmacol Physiol       Date:  1998-09       Impact factor: 2.557

10.  Platypus globin genes and flanking loci suggest a new insertional model for beta-globin evolution in birds and mammals.

Authors:  Vidushi S Patel; Steven J B Cooper; Janine E Deakin; Bob Fulton; Tina Graves; Wesley C Warren; Richard K Wilson; Jennifer A M Graves
Journal:  BMC Biol       Date:  2008-07-25       Impact factor: 7.431

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  5 in total

Review 1.  Evolution of hemoglobin loci and their regulatory elements.

Authors:  Sjaak Philipsen; Ross C Hardison
Journal:  Blood Cells Mol Dis       Date:  2017-08-09       Impact factor: 3.039

Review 2.  Phylogenetic diversification of the globin gene superfamily in chordates.

Authors:  Jay F Storz; Juan C Opazo; Federico G Hoffmann
Journal:  IUBMB Life       Date:  2011-05-09       Impact factor: 3.885

Review 3.  Gene duplication, genome duplication, and the functional diversification of vertebrate globins.

Authors:  Jay F Storz; Juan C Opazo; Federico G Hoffmann
Journal:  Mol Phylogenet Evol       Date:  2012-07-27       Impact factor: 4.286

4.  Molecular cytogenetic map of the central bearded dragon, Pogona vitticeps (Squamata: Agamidae).

Authors:  M J Young; D O'Meally; S D Sarre; A Georges; T Ezaz
Journal:  Chromosome Res       Date:  2013-05-24       Impact factor: 5.239

5.  Whole-genome duplication and the functional diversification of teleost fish hemoglobins.

Authors:  Juan C Opazo; G Tyler Butts; Mariana F Nery; Jay F Storz; Federico G Hoffmann
Journal:  Mol Biol Evol       Date:  2012-09-04       Impact factor: 16.240

  5 in total

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