Literature DB >> 21116486

DNA Encapsulation of Ten Silver Atoms Produces a Bright, Modulatable, Near Infrared-Emitting Cluster.

Jeffrey T Petty1, Chaoyang Fan, Sandra P Story, Bidisha Sengupta, Ashlee St John Iyer, Zachary Prudowsky, Robert M Dickson.   

Abstract

Photostability, inherent fluorescence brightness, and optical modulation of fluorescence are key attributes distinguishing silver nanoclusters as fluorophores. DNA plays a central role both by protecting the clusters in aqueous environments and by directing their formation. Herein, we characterize a new near infrared-emitting cluster with excitation and emission maxima at 750 and 810 nm, respectively that is stabilized within C(3)AC(3)AC(3)TC(3)A. Following chromatographic resolution of the near infrared species, a stoichiometry of 10 Ag/oligonucleotide was determined. Combined with excellent photostability, the cluster's 30% fluorescence quantum yield and 180,000 M(-1)cm(-1) extinction coefficient give it a fluorescence brightness that significantly improves on that of the organic dye Cy7. Fluorescence correlation analysis shows an optically accessible dark state that can be directly depopulated with longer wavelength co-illumination. The coupled increase in total fluorescence demonstrates that enhanced sensitivity can be realized through Synchronously Amplified Fluorescence Image Recovery (SAFIRe), which further differentiates this new fluorophore.

Entities:  

Year:  2010        PMID: 21116486      PMCID: PMC2992357          DOI: 10.1021/jz100817z

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  30 in total

1.  Near-infrared fluorescent type II quantum dots for sentinel lymph node mapping.

Authors:  Sungjee Kim; Yong Taik Lim; Edward G Soltesz; Alec M De Grand; Jaihyoung Lee; Akira Nakayama; J Anthony Parker; Tomislav Mihaljevic; Rita G Laurence; Delphine M Dor; Lawrence H Cohn; Moungi G Bawendi; John V Frangioni
Journal:  Nat Biotechnol       Date:  2003-12-07       Impact factor: 54.908

2.  A complementary palette of fluorescent silver nanoclusters.

Authors:  Jaswinder Sharma; Hsin-Chih Yeh; Hyojong Yoo; James H Werner; Jennifer S Martinez
Journal:  Chem Commun (Camb)       Date:  2010-03-26       Impact factor: 6.222

Review 3.  Quantum dots for live cells, in vivo imaging, and diagnostics.

Authors:  X Michalet; F F Pinaud; L A Bentolila; J M Tsay; S Doose; J J Li; G Sundaresan; A M Wu; S S Gambhir; S Weiss
Journal:  Science       Date:  2005-01-28       Impact factor: 47.728

Review 4.  Bright ideas for chemical biology.

Authors:  Luke D Lavis; Ronald T Raines
Journal:  ACS Chem Biol       Date:  2008-03-20       Impact factor: 5.100

Review 5.  Quantum dots versus organic dyes as fluorescent labels.

Authors:  Ute Resch-Genger; Markus Grabolle; Sara Cavaliere-Jaricot; Roland Nitschke; Thomas Nann
Journal:  Nat Methods       Date:  2008-09       Impact factor: 28.547

6.  InAs(ZnCdS) quantum dots optimized for biological imaging in the near-infrared.

Authors:  Peter M Allen; Wenhao Liu; Vikash P Chauhan; Jungmin Lee; Alice Y Ting; Dai Fukumura; Rakesh K Jain; Moungi G Bawendi
Journal:  J Am Chem Soc       Date:  2010-01-20       Impact factor: 15.419

7.  Synchronously amplified fluorescence image recovery (SAFIRe).

Authors:  Chris I Richards; Jung-Cheng Hsiang; Robert M Dickson
Journal:  J Phys Chem B       Date:  2010-01-14       Impact factor: 2.991

8.  Bright, color-tunable fluorescent dyes in the Vis/NIR region: establishment of new "tailor-made" multicolor fluorophores based on borondipyrromethene.

Authors:  Keitaro Umezawa; Akihiro Matsui; Yuki Nakamura; Daniel Citterio; Koji Suzuki
Journal:  Chemistry       Date:  2009       Impact factor: 5.236

9.  Quantitative comparison of long-wavelength Alexa Fluor dyes to Cy dyes: fluorescence of the dyes and their bioconjugates.

Authors:  Judith E Berlier; Anca Rothe; Gayle Buller; Jolene Bradford; Diane R Gray; Brian J Filanoski; William G Telford; Stephen Yue; Jixiang Liu; Ching-Ying Cheung; Wesley Chang; James D Hirsch; Joseph M Beechem; Rosaria P Haugland; Richard P Haugland
Journal:  J Histochem Cytochem       Date:  2003-12       Impact factor: 2.479

10.  Mammalian expression of infrared fluorescent proteins engineered from a bacterial phytochrome.

Authors:  Xiaokun Shu; Antoine Royant; Michael Z Lin; Todd A Aguilera; Varda Lev-Ram; Paul A Steinbach; Roger Y Tsien
Journal:  Science       Date:  2009-05-08       Impact factor: 47.728

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  27 in total

1.  Optically enhanced, near-IR, silver cluster emission altered by single base changes in the DNA template.

Authors:  Jeffrey T Petty; Chaoyang Fan; Sandra P Story; Bidisha Sengupta; Matthew Sartin; Jung-Cheng Hsiang; Joseph W Perry; Robert M Dickson
Journal:  J Phys Chem B       Date:  2011-05-25       Impact factor: 2.991

2.  DNA sensing by amplifying the number of near-infrared emitting, oligonucleotide-encapsulated silver clusters.

Authors:  Jeffrey T Petty; Bidisha Sengupta; Sandra P Story; Natalya N Degtyareva
Journal:  Anal Chem       Date:  2011-07-13       Impact factor: 6.986

3.  Optically Activated Delayed Fluorescence.

Authors:  Blake C Fleischer; Jeffrey T Petty; Jung-Cheng Hsiang; Robert M Dickson
Journal:  J Phys Chem Lett       Date:  2017-07-17       Impact factor: 6.475

4.  Different sized luminescent gold nanoparticles.

Authors:  Jie Zheng; Chen Zhou; Mengxiao Yu; Jinbin Liu
Journal:  Nanoscale       Date:  2012-06-15       Impact factor: 7.790

5.  DNA-Templated Molecular Silver Fluorophores.

Authors:  Jeffrey T Petty; Sandra P Story; Jung-Cheng Hsiang; Robert M Dickson
Journal:  J Phys Chem Lett       Date:  2013-04-04       Impact factor: 6.475

6.  Optical modulation and selective recovery of Cy5 fluorescence.

Authors:  Chaoyang Fan; Jung-Cheng Hsiang; Robert M Dickson
Journal:  Chemphyschem       Date:  2011-11-15       Impact factor: 3.102

7.  Tailoring silver nanodots for intracellular staining.

Authors:  Sungmoon Choi; Junhua Yu; Sandeep A Patel; Yih-Ling Tzeng; Robert M Dickson
Journal:  Photochem Photobiol Sci       Date:  2010-11-09       Impact factor: 3.982

8.  Optical sensing by transforming chromophoric silver clusters in DNA nanoreactors.

Authors:  Jeffrey T Petty; Sandra P Story; Selina Juarez; Samuel S Votto; Austin G Herbst; Natalya N Degtyareva; Bidisha Sengupta
Journal:  Anal Chem       Date:  2011-12-08       Impact factor: 6.986

9.  Silver clusters as both chromophoric reporters and DNA ligands.

Authors:  Jeffrey T Petty; Banabihari Giri; Ian C Miller; David A Nicholson; Orlin O Sergev; Taylor M Banks; Sandra P Story
Journal:  Anal Chem       Date:  2013-02-01       Impact factor: 6.986

10.  A silver cluster-DNA equilibrium.

Authors:  Jeffrey T Petty; Orlin O Sergev; David A Nicholson; Peter M Goodwin; Banabihari Giri; D Ryan McMullan
Journal:  Anal Chem       Date:  2013-09-26       Impact factor: 6.986

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