Literature DB >> 21113135

c-IAP1 and UbcH5 promote K11-linked polyubiquitination of RIP1 in TNF signalling.

Jasmin N Dynek1, Tatiana Goncharov, Erin C Dueber, Anna V Fedorova, Anita Izrael-Tomasevic, Lilian Phu, Elizabeth Helgason, Wayne J Fairbrother, Kurt Deshayes, Donald S Kirkpatrick, Domagoj Vucic.   

Abstract

Ubiquitin ligases are critical components of the ubiquitination process that determine substrate specificity and, in collaboration with E2 ubiquitin-conjugating enzymes, regulate the nature of polyubiquitin chains assembled on their substrates. Cellular inhibitor of apoptosis (c-IAP1 and c-IAP2) proteins are recruited to TNFR1-associated signalling complexes where they regulate receptor-stimulated NF-κB activation through their RING domain ubiquitin ligase activity. Using a directed yeast two-hybrid screen, we found several novel and previously identified E2 partners of IAP RING domains. Among these, the UbcH5 family of E2 enzymes are critical regulators of the stability of c-IAP1 protein following destabilizing stimuli such as TWEAK or CD40 signalling or IAP antagonists. We demonstrate that c-IAP1 and UbcH5 family promote K11-linked polyubiquitination of receptor-interacting protein 1 (RIP1) in vitro and in vivo. We further show that TNFα-stimulated NF-κB activation involves endogenous K11-linked ubiquitination of RIP1 within the TNFR1 signalling complex that is c-IAP1 and UbcH5 dependent. Lastly, NF-κB essential modifier efficiently binds K11-linked ubiquitin chains, suggesting that this ubiquitin linkage may have a signalling role in the activation of proliferative cellular pathways.

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Year:  2010        PMID: 21113135      PMCID: PMC3018797          DOI: 10.1038/emboj.2010.300

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  45 in total

Review 1.  RING domain E3 ubiquitin ligases.

Authors:  Raymond J Deshaies; Claudio A P Joazeiro
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

2.  Structures of the cIAP2 RING domain reveal conformational changes associated with ubiquitin-conjugating enzyme (E2) recruitment.

Authors:  Peter D Mace; Katrin Linke; Rebecca Feltham; Frances-Rose Schumacher; Clyde A Smith; David L Vaux; John Silke; Catherine L Day
Journal:  J Biol Chem       Date:  2008-09-10       Impact factor: 5.157

Review 3.  The emerging complexity of protein ubiquitination.

Authors:  David Komander
Journal:  Biochem Soc Trans       Date:  2009-10       Impact factor: 5.407

Review 4.  If the prophet does not come to the mountain: dynamics of signaling complexes in NF-kappaB activation.

Authors:  Andrew Kovalenko; David Wallach
Journal:  Mol Cell       Date:  2006-05-19       Impact factor: 17.970

5.  Structural basis for recognition of diubiquitins by NEMO.

Authors:  Yu-Chih Lo; Su-Chang Lin; Carla C Rospigliosi; Dietrich B Conze; Chuan-Jin Wu; Jonathan D Ashwell; David Eliezer; Hao Wu
Journal:  Mol Cell       Date:  2009-01-29       Impact factor: 17.970

6.  A ubiquitin replacement strategy in human cells reveals distinct mechanisms of IKK activation by TNFalpha and IL-1beta.

Authors:  Ming Xu; Brian Skaug; Wenwen Zeng; Zhijian J Chen
Journal:  Mol Cell       Date:  2009-10-23       Impact factor: 17.970

7.  E2 interaction and dimerization in the crystal structure of TRAF6.

Authors:  Qian Yin; Su-Chang Lin; Betty Lamothe; Miao Lu; Yu-Chih Lo; Gregory Hura; Lixin Zheng; Rebecca L Rich; Alejandro D Campos; David G Myszka; Michael J Lenardo; Bryant G Darnay; Hao Wu
Journal:  Nat Struct Mol Biol       Date:  2009-05-24       Impact factor: 15.369

8.  Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation.

Authors:  Simin Rahighi; Fumiyo Ikeda; Masato Kawasaki; Masato Akutsu; Nobuhiro Suzuki; Ryuichi Kato; Tobias Kensche; Tamami Uejima; Stuart Bloor; David Komander; Felix Randow; Soichi Wakatsuki; Ivan Dikic
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

9.  What was the set of ubiquitin and ubiquitin-like conjugating enzymes in the eukaryote common ancestor?

Authors:  Caroline Michelle; Patrick Vourc'h; Laurence Mignon; Christian R Andres
Journal:  J Mol Evol       Date:  2009-05-19       Impact factor: 2.395

Review 10.  Ubiquitin-like protein activation by E1 enzymes: the apex for downstream signalling pathways.

Authors:  Brenda A Schulman; J Wade Harper
Journal:  Nat Rev Mol Cell Biol       Date:  2009-04-08       Impact factor: 94.444

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  166 in total

1.  Human proteome-scale structural modeling of E2-E3 interactions exploiting interface motifs.

Authors:  Gozde Kar; Ozlem Keskin; Ruth Nussinov; Attila Gursoy
Journal:  J Proteome Res       Date:  2012-01-10       Impact factor: 4.466

2.  Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex.

Authors:  Yusuke Sato; Hiroaki Fujita; Azusa Yoshikawa; Masami Yamashita; Atsushi Yamagata; Stephen E Kaiser; Kazuhiro Iwai; Shuya Fukai
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-02       Impact factor: 11.205

3.  IAPs, TNF, inflammation and Jürg Tschopp; a personal perspective.

Authors:  J Silke; J E Vince
Journal:  Cell Death Differ       Date:  2012-01       Impact factor: 15.828

4.  Improved quantitative mass spectrometry methods for characterizing complex ubiquitin signals.

Authors:  Lilian Phu; Anita Izrael-Tomasevic; Marissa L Matsumoto; Daisy Bustos; Jasmin N Dynek; Anna V Fedorova; Corey E Bakalarski; David Arnott; Kurt Deshayes; Vishva M Dixit; Robert F Kelley; Domagoj Vucic; Donald S Kirkpatrick
Journal:  Mol Cell Proteomics       Date:  2010-11-03       Impact factor: 5.911

5.  Ehrlichia chaffeensis TRP120 Moonlights as a HECT E3 Ligase Involved in Self- and Host Ubiquitination To Influence Protein Interactions and Stability for Intracellular Survival.

Authors:  Bing Zhu; Seema Das; Shubhajit Mitra; Tierra R Farris; Jere W McBride
Journal:  Infect Immun       Date:  2017-08-18       Impact factor: 3.441

Review 6.  Structural basis of signal transduction in the TNF receptor superfamily.

Authors:  Jixi Li; Qian Yin; Hao Wu
Journal:  Adv Immunol       Date:  2013       Impact factor: 3.543

7.  Insights into the Porcine Reproductive and Respiratory Syndrome Virus Viral Ovarian Tumor Domain Protease Specificity for Ubiquitin and Interferon Stimulated Gene Product 15.

Authors:  Stephanie M Bester; Courtney M Daczkowski; Kay S Faaberg; Scott D Pegan
Journal:  ACS Infect Dis       Date:  2018-06-12       Impact factor: 5.084

8.  Molluscum Contagiosum Virus MC159 Abrogates cIAP1-NEMO Interactions and Inhibits NEMO Polyubiquitination.

Authors:  Sunetra Biswas; Joanna L Shisler
Journal:  J Virol       Date:  2017-07-12       Impact factor: 5.103

9.  Two coordinated mechanisms underlie tumor necrosis factor alpha-induced immediate and delayed IκB kinase activation.

Authors:  Ken Blackwell; Laiqun Zhang; Lauren M Workman; Adrian T Ting; Kazuhiro Iwai; Hasem Habelhah
Journal:  Mol Cell Biol       Date:  2013-03-04       Impact factor: 4.272

10.  miR-486 sustains NF-κB activity by disrupting multiple NF-κB-negative feedback loops.

Authors:  Libing Song; Chuyong Lin; Hui Gong; Chanjuan Wang; Liping Liu; Jueheng Wu; Sha Tao; Bo Hu; Shi-Yuan Cheng; Mengfeng Li; Jun Li
Journal:  Cell Res       Date:  2012-12-18       Impact factor: 25.617

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