Literature DB >> 21109780

The hypoxia-inducible transcription factor pathway regulates oxygen sensing in the simplest animal, Trichoplax adhaerens.

Christoph Loenarz1, Mathew L Coleman, Anna Boleininger, Bernd Schierwater, Peter W H Holland, Peter J Ratcliffe, Christopher J Schofield.   

Abstract

The hypoxic response in humans is mediated by the hypoxia-inducible transcription factor (HIF), for which prolyl hydroxylases (PHDs) act as oxygen-sensing components. The evolutionary origins of the HIF system have been previously unclear. We demonstrate a functional HIF system in the simplest animal, Trichoplax adhaerens: HIF targets in T. adhaerens include glycolytic and metabolic enzymes, suggesting a role for HIF in the adaptation of basal multicellular animals to fluctuating oxygen levels. Characterization of the T. adhaerens PHDs and cross-species complementation assays reveal a conserved oxygen-sensing mechanism. Cross-genomic analyses rationalize the relative importance of HIF system components, and imply that the HIF system is likely to be present in all animals, but is unique to this kingdom.

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Year:  2010        PMID: 21109780      PMCID: PMC3024122          DOI: 10.1038/embor.2010.170

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  24 in total

1.  Differential regulation of HIF-1 alpha prolyl-4-hydroxylase genes by hypoxia in human cardiovascular cells.

Authors:  Catherine L Cioffi; Xiao Qin Liu; Penelope A Kosinski; Michelle Garay; Benjamin R Bowen
Journal:  Biochem Biophys Res Commun       Date:  2003-04-11       Impact factor: 3.575

Review 2.  Physiological and biochemical aspects of hydroxylations and demethylations catalyzed by human 2-oxoglutarate oxygenases.

Authors:  Christoph Loenarz; Christopher J Schofield
Journal:  Trends Biochem Sci       Date:  2010-08-20       Impact factor: 13.807

3.  Evidence for the slow reaction of hypoxia-inducible factor prolyl hydroxylase 2 with oxygen.

Authors:  Emily Flashman; Lee M Hoffart; Refaat B Hamed; J Martin Bollinger; Carsten Krebs; Christopher J Schofield
Journal:  FEBS J       Date:  2010-08-31       Impact factor: 5.542

4.  Structural basis for binding of hypoxia-inducible factor to the oxygen-sensing prolyl hydroxylases.

Authors:  Rasheduzzaman Chowdhury; Michael A McDonough; Jasmin Mecinović; Christoph Loenarz; Emily Flashman; Kirsty S Hewitson; Carmen Domene; Christopher J Schofield
Journal:  Structure       Date:  2009-07-15       Impact factor: 5.006

5.  Characterization of the human prolyl 4-hydroxylases that modify the hypoxia-inducible factor.

Authors:  Maija Hirsilä; Peppi Koivunen; Volkmar Günzler; Kari I Kivirikko; Johanna Myllyharju
Journal:  J Biol Chem       Date:  2003-06-03       Impact factor: 5.157

6.  Inhibitory PAS domain protein (IPAS) is a hypoxia-inducible splicing variant of the hypoxia-inducible factor-3alpha locus.

Authors:  Yuichi Makino; Arvydas Kanopka; William J Wilson; Hirotoshi Tanaka; Lorenz Poellinger
Journal:  J Biol Chem       Date:  2002-07-15       Impact factor: 5.157

Review 7.  FeII/alpha-ketoglutarate-dependent hydroxylases and related enzymes.

Authors:  Robert P Hausinger
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Jan-Feb       Impact factor: 8.250

8.  Regulation of HIF prolyl hydroxylases by hypoxia-inducible factors.

Authors:  Olga Aprelikova; Gadisetti V R Chandramouli; Matthew Wood; James R Vasselli; Joseph Riss; Jodi K Maranchie; W Marston Linehan; J Carl Barrett
Journal:  J Cell Biochem       Date:  2004-06-01       Impact factor: 4.429

9.  A feedback loop involving the Phd3 prolyl hydroxylase tunes the mammalian hypoxic response in vivo.

Authors:  Yoji Andrew Minamishima; Javid Moslehi; Robert F Padera; Roderick T Bronson; Ronglih Liao; William G Kaelin
Journal:  Mol Cell Biol       Date:  2009-08-31       Impact factor: 4.272

10.  Genome-wide association of hypoxia-inducible factor (HIF)-1alpha and HIF-2alpha DNA binding with expression profiling of hypoxia-inducible transcripts.

Authors:  David R Mole; Christine Blancher; Richard R Copley; Patrick J Pollard; Jonathan M Gleadle; Jiannis Ragoussis; Peter J Ratcliffe
Journal:  J Biol Chem       Date:  2009-04-21       Impact factor: 5.157

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  95 in total

Review 1.  Hypoxia-inducible factors in physiology and medicine.

Authors:  Gregg L Semenza
Journal:  Cell       Date:  2012-02-03       Impact factor: 41.582

Review 2.  Oxygen levels and the regulation of cell adhesion in the nervous system: a control point for morphogenesis in development, disease and evolution?

Authors:  Kathryn L Crossin
Journal:  Cell Adh Migr       Date:  2012 Jan-Feb       Impact factor: 3.405

Review 3.  HIF-1 mediates metabolic responses to intratumoral hypoxia and oncogenic mutations.

Authors:  Gregg L Semenza
Journal:  J Clin Invest       Date:  2013-09-03       Impact factor: 14.808

4.  Structural and functional analysis of amphioxus HIFα reveals ancient features of the HIFα family.

Authors:  Shan Gao; Ling Lu; Yan Bai; Peng Zhang; Weibo Song; Cunming Duan
Journal:  FASEB J       Date:  2013-10-30       Impact factor: 5.191

Review 5.  The regulation of pulmonary inflammation by the hypoxia-inducible factor-hydroxylase oxygen-sensing pathway.

Authors:  Moira K B Whyte; Sarah R Walmsley
Journal:  Ann Am Thorac Soc       Date:  2014-12

Review 6.  Waterproofing crops: effective flooding survival strategies.

Authors:  Julia Bailey-Serres; Seung Cho Lee; Erin Brinton
Journal:  Plant Physiol       Date:  2012-10-23       Impact factor: 8.340

7.  The neurobiology of sensing respiratory gases for the control of animal behavior.

Authors:  Dengke K Ma; Niels Ringstad
Journal:  Front Biol (Beijing)       Date:  2012-06

Review 8.  Adaptive cellular stress pathways as therapeutic targets of dietary phytochemicals: focus on the nervous system.

Authors:  Jaewon Lee; Dong-Gyu Jo; Daeui Park; Hae Young Chung; Mark P Mattson
Journal:  Pharmacol Rev       Date:  2014-07       Impact factor: 25.468

9.  Hydroxylation of the eukaryotic ribosomal decoding center affects translational accuracy.

Authors:  Christoph Loenarz; Rok Sekirnik; Armin Thalhammer; Wei Ge; Ekaterina Spivakovsky; Mukram M Mackeen; Michael A McDonough; Matthew E Cockman; Benedikt M Kessler; Peter J Ratcliffe; Alexander Wolf; Christopher J Schofield
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

Review 10.  Oxygen sensing strategies in mammals and bacteria.

Authors:  Cornelius Y Taabazuing; John A Hangasky; Michael J Knapp
Journal:  J Inorg Biochem       Date:  2014-01-03       Impact factor: 4.155

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