Literature DB >> 21104366

A genome-wide association analysis implicates SOX6 as a candidate gene for wrist bone mass.

LiJun Tan1, Rong Liu, ShuFeng Lei, Rong Pan, TieLin Yang, Han Yan, YuFang Pei, Fang Yang, Feng Zhang, Feng Pan, YinPin Zhang, HongGang Hu, Shawn Levy, HongWen Deng.   

Abstract

Osteoporosis is a highly heritable common bone disease leading to fractures that severely impair the life quality of patients. Wrist fractures caused by osteoporosis are largely due to the scarcity of wrist bone mass. Here we report the results of a genome-wide association study (GWAS) of wrist bone mineral density (BMD). We examined ∼500000 SNP markers in 1000 unrelated homogeneous Caucasian subjects and found a novel allelic association with wrist BMD at rs11023787 in the SOX6 (SRY (sex determining region Y)-box 6) gene (P=9.00×10(-5)). Subjects carrying the C allele of rs11023787 in SOX6 had significantly higher mean wrist BMD values than those with the T allele (0.485:0.462 g cm(-2) for C allele vs. T allele carriers). For validation, we performed SOX6 association for BMD in an independent Chinese sample and found that SNP rs11023787 was significantly associated with wrist BMD in the Chinese sample (P=6.41×10(-3)). Meta-analyses of the GWAS scan and the replication studies yielded P-values of 5.20×10(-6) for rs11023787. Results of this study, together with the functional relevance of SOX6 in cartilage formation, support the SOX6 gene as an important gene for BMD variation.

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Year:  2010        PMID: 21104366     DOI: 10.1007/s11427-010-4056-7

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  6 in total

1.  Genetic variants in the SOX6 gene are associated with bone mineral density in both Caucasian and Chinese populations.

Authors:  T-L Yang; Y Guo; Y-J Liu; H Shen; Y-Z Liu; S-F Lei; J Li; Q Tian; H-W Deng
Journal:  Osteoporos Int       Date:  2011-04-06       Impact factor: 4.507

Review 2.  Clinical review: Genome-wide association studies of skeletal phenotypes: what we have learned and where we are headed.

Authors:  Yi-Hsiang Hsu; Douglas P Kiel
Journal:  J Clin Endocrinol Metab       Date:  2012-09-10       Impact factor: 5.958

Review 3.  Twelve years of GWAS discoveries for osteoporosis and related traits: advances, challenges and applications.

Authors:  Xiaowei Zhu; Weiyang Bai; Houfeng Zheng
Journal:  Bone Res       Date:  2021-04-29       Impact factor: 13.567

4.  Gene-based GWAS analysis for consecutive studies of GEFOS.

Authors:  W Zhu; C Xu; J-G Zhang; H He; K-H Wu; L Zhang; Y Zeng; Y Zhou; K-J Su; H-W Deng
Journal:  Osteoporos Int       Date:  2018-10-10       Impact factor: 4.507

Review 5.  Genome-wide approaches for identifying genetic risk factors for osteoporosis.

Authors:  Shuyan Wu; Yongjun Liu; Lei Zhang; Yingying Han; Yong Lin; Hong-Wen Deng
Journal:  Genome Med       Date:  2013-05-29       Impact factor: 11.117

6.  Association between osteoporosis and menopause in relation to SOX6 rs297325 variant in Taiwanese women.

Authors:  Tzu-Liang Hsu; Disline Manli Tantoh; Ying-Hsiang Chou; Shu-Yi Hsu; Chien-Chang Ho; Chia-Chi Lung; Cheng-Feng Jan; Lee Wang; Yung-Po Liaw
Journal:  Menopause       Date:  2020-08       Impact factor: 3.310

  6 in total

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