Literature DB >> 21104309

The impacts of geometry and binding on CaMKII diffusion and retention in dendritic spines.

Michael J Byrne1, M Neal Waxham, Yoshihisa Kubota.   

Abstract

We used a particle-based Monte Carlo simulation to dissect the regulatory mechanism of molecular translocation of CaMKII, a key regulator of neuronal synaptic function. Geometry was based upon measurements from EM reconstructions of dendrites in CA1 hippocampal pyramidal neurons. Three types of simulations were performed to investigate the effects of geometry and other mechanisms that control CaMKII translocation in and out of dendritic spines. First, the diffusional escape rate of CaMKII from model spines of varied morphologies was examined. Second, a postsynaptic density (PSD) was added to study the impact of binding sites on this escape rate. Third, translocation of CaMKII from dendrites and trapping in spines was investigated using a simulated dendrite. Based on diffusion alone, a spine of average dimensions had the ability to retain CaMKII for duration of ~4 s. However, binding sites mimicking those in the PSD controlled the residence time of CaMKII in a highly nonlinear manner. In addition, we observed that F-actin at the spine head/neck junction had a significant impact on CaMKII trapping in dendritic spines. We discuss these results in the context of possible mechanisms that may explain the experimental results that have shown extended accumulation of CaMKII in dendritic spines during synaptic plasticity and LTP induction.

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Year:  2010        PMID: 21104309      PMCID: PMC3617044          DOI: 10.1007/s10827-010-0293-9

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  38 in total

1.  Three-dimensional reconstructions of calcium/calmodulin-dependent (CaM) kinase IIalpha and truncated CaM kinase IIalpha reveal a unique organization for its structural core and functional domains.

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2.  Regulation of spine calcium dynamics by rapid spine motility.

Authors:  A Majewska; A Tashiro; R Yuste
Journal:  J Neurosci       Date:  2000-11-15       Impact factor: 6.167

3.  Molecular memory by reversible translocation of calcium/calmodulin-dependent protein kinase II.

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Journal:  Nat Neurosci       Date:  2000-09       Impact factor: 24.884

4.  Structural basis of long-term potentiation in single dendritic spines.

Authors:  Masanori Matsuzaki; Naoki Honkura; Graham C R Ellis-Davies; Haruo Kasai
Journal:  Nature       Date:  2004-06-09       Impact factor: 49.962

5.  Association of calcium/calmodulin-dependent kinase II with developmentally regulated splice variants of the postsynaptic density protein densin-180.

Authors:  S Strack; A J Robison; M A Bass; R J Colbran
Journal:  J Biol Chem       Date:  2000-08-18       Impact factor: 5.157

6.  Cellular dynamic simulator: an event driven molecular simulation environment for cellular physiology.

Authors:  Michael J Byrne; M Neal Waxham; Yoshihisa Kubota
Journal:  Neuroinformatics       Date:  2010-06

7.  Equilibrium theory for the clustering of bivalent cell surface receptors by trivalent ligands. Application to histamine release from basophils.

Authors:  B Goldstein; A S Perelson
Journal:  Biophys J       Date:  1984-06       Impact factor: 4.033

Review 8.  The molecular basis of CaMKII function in synaptic and behavioural memory.

Authors:  J Lisman; H Schulman; H Cline
Journal:  Nat Rev Neurosci       Date:  2002-03       Impact factor: 34.870

9.  Persistent accumulation of calcium/calmodulin-dependent protein kinase II in dendritic spines after induction of NMDA receptor-dependent chemical long-term potentiation.

Authors:  Nikolai Otmakhov; Jung-Hwa Tao-Cheng; Stephen Carpenter; Brent Asrican; Ayse Dosemeci; Thomas S Reese; John Lisman
Journal:  J Neurosci       Date:  2004-10-20       Impact factor: 6.167

10.  Type II Ca2+/calmodulin-dependent protein kinase binds to actin filaments in a calmodulin-sensitive manner.

Authors:  Y Ohta; E Nishida; H Sakai
Journal:  FEBS Lett       Date:  1986-11-24       Impact factor: 4.124

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  19 in total

1.  Effect of binding on escape from cavity through narrow tunnel.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug
Journal:  J Chem Phys       Date:  2012-03-28       Impact factor: 3.488

2.  Measuring CaMKII concentration in dendritic spines.

Authors:  Nikolai Otmakhov; John Lisman
Journal:  J Neurosci Methods       Date:  2011-10-01       Impact factor: 2.390

3.  Multiple spatial and kinetic subpopulations of CaMKII in spines and dendrites as resolved by single-molecule tracking PALM.

Authors:  Hsiangmin E Lu; Harold D MacGillavry; Nicholas A Frost; Thomas A Blanpied
Journal:  J Neurosci       Date:  2014-05-28       Impact factor: 6.167

4.  Spatiotemporal maps of CaMKII in dendritic spines.

Authors:  Shahid Khan; Thomas S Reese; Nasir Rajpoot; Ayisha Shabbir
Journal:  J Comput Neurosci       Date:  2012-01-05       Impact factor: 1.621

5.  Quantitative estimates of the cytoplasmic, PSD, and NMDAR-bound pools of CaMKII in dendritic spines.

Authors:  Bihua Feng; Sridhar Raghavachari; John Lisman
Journal:  Brain Res       Date:  2011-08-27       Impact factor: 3.252

Review 6.  Tau acts as a mediator for Alzheimer's disease-related synaptic deficits.

Authors:  Dezhi Liao; Eric C Miller; Peter J Teravskis
Journal:  Eur J Neurosci       Date:  2014-04       Impact factor: 3.386

7.  Tau phosphorylation and tau mislocalization mediate soluble Aβ oligomer-induced AMPA glutamate receptor signaling deficits.

Authors:  Eric C Miller; Peter J Teravskis; Benjamin W Dummer; Xiaohui Zhao; Richard L Huganir; Dezhi Liao
Journal:  Eur J Neurosci       Date:  2014-04       Impact factor: 3.386

Review 8.  Approaches and tools for modeling signaling pathways and calcium dynamics in neurons.

Authors:  K T Blackwell
Journal:  J Neurosci Methods       Date:  2013-06-03       Impact factor: 2.390

Review 9.  The mechanisms underlying the spatial spreading of signaling activity.

Authors:  Ryohei Yasuda; Hideji Murakoshi
Journal:  Curr Opin Neurobiol       Date:  2011-03-21       Impact factor: 6.627

10.  Diffusion on Membrane Domes, Tubes, and Pearling Structures.

Authors:  Rossana Rojas Molina; Susanne Liese; Andreas Carlson
Journal:  Biophys J       Date:  2020-12-24       Impact factor: 4.033

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