Literature DB >> 2109322

The second zinc-finger domain of poly(ADP-ribose) polymerase determines specificity for single-stranded breaks in DNA.

G Gradwohl1, J M Ménissier de Murcia, M Molinete, F Simonin, M Koken, J H Hoeijmakers, G de Murcia.   

Abstract

Poly(ADP-ribose) polymerase (EC 2.4.2.30) is a zinc-binding protein that specifically binds to a DNA strand break in a zinc-dependent manner. We describe here the cloning and expression in Escherichia coli of a cDNA fragment encoding the two putative zinc fingers (FI and FII) domain of the human poly(ADP-ribose) polymerase. Using site-directed mutagenesis, we identified the amino acids involved in metal coordination and analyzed the consequence of altering the proposed zinc-finger structures on DNA binding. Disruption of the metal binding ability of the second zinc finger, FII, dramatically reduced target DNA binding. In contrast, when the postulated Zn(II) ligands of FI were mutated, the DNA binding activity was only slightly affected. DNase I protection studies showed that the FII is involved in the specific recognition of a DNA strand break. These results demonstrate that poly(ADP-ribose) polymerase contains a type of zinc finger that differs from previously recognized classes in terms of both structure and function.

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Year:  1990        PMID: 2109322      PMCID: PMC53819          DOI: 10.1073/pnas.87.8.2990

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase.

Authors:  F Sanger; A R Coulson
Journal:  J Mol Biol       Date:  1975-05-25       Impact factor: 5.469

2.  Reconstitution and poly(ADP-ribosyl)ation of proteolytically fragmented poly(ADP-ribose) synthetase.

Authors:  I Kameshita; M Matsuda; M Nishikimi; H Ushiro; Y Shizuta
Journal:  J Biol Chem       Date:  1986-03-15       Impact factor: 5.157

3.  Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.

Authors:  H Towbin; T Staehelin; J Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  High-level production of biologically active human alpha 1-antitrypsin in Escherichia coli.

Authors:  M Courtney; A Buchwalder; L H Tessier; M Jaye; A Benavente; A Balland; V Kohli; R Lathe; P Tolstoshev; J P Lecocq
Journal:  Proc Natl Acad Sci U S A       Date:  1984-02       Impact factor: 11.205

6.  The primary structure of transcription factor TFIIIA has 12 consecutive repeats.

Authors:  R S Brown; C Sander; P Argos
Journal:  FEBS Lett       Date:  1985-07-08       Impact factor: 4.124

7.  Zinc-binding domain of poly(ADP-ribose)polymerase participates in the recognition of single strand breaks on DNA.

Authors:  J Ménissier-de Murcia; M Molinete; G Gradwohl; F Simonin; G de Murcia
Journal:  J Mol Biol       Date:  1989-11-05       Impact factor: 5.469

8.  Poly(ADP-ribose) polymerase is a zinc metalloenzyme.

Authors:  P Zahradka; K Ebisuzaki
Journal:  Eur J Biochem       Date:  1984-08-01

9.  Poly(ADP-ribose) synthesis in vitro programmed by damaged DNA. A comparison of DNA molecules containing different types of strand breaks.

Authors:  R C Benjamin; D M Gill
Journal:  J Biol Chem       Date:  1980-11-10       Impact factor: 5.157

10.  Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes.

Authors:  J Miller; A D McLachlan; A Klug
Journal:  EMBO J       Date:  1985-06       Impact factor: 11.598

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  90 in total

1.  Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications.

Authors:  J Y Lee; C Chang; H K Song; J Moon; J K Yang; H K Kim; S T Kwon; S W Suh
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

Review 2.  Structural and mechanistic conservation in DNA ligases.

Authors:  A J Doherty; S W Suh
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

3.  Sensing DNA damage by PARP-like fingers.

Authors:  Stefania Petrucco
Journal:  Nucleic Acids Res       Date:  2003-12-01       Impact factor: 16.971

4.  Double-stranded DNA binding domain of poly(ADP-ribose) polymerase-1 and molecular insight into the regulation of its activity.

Authors:  Orlando Huambachano; Fatima Herrera; Ann Rancourt; Masahiko S Satoh
Journal:  J Biol Chem       Date:  2010-12-23       Impact factor: 5.157

5.  XRCC1 is specifically associated with poly(ADP-ribose) polymerase and negatively regulates its activity following DNA damage.

Authors:  M Masson; C Niedergang; V Schreiber; S Muller; J Menissier-de Murcia; G de Murcia
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

6.  Modulation of poly(ADP-ribose) polymerase during neutrophilic and monocytic differentiation of promyelocytic (NB4) and myelocytic (HL-60) leukaemia cells.

Authors:  M Bhatia; J B Kirkland; K A Meckling-Gill
Journal:  Biochem J       Date:  1995-05-15       Impact factor: 3.857

7.  Temporal changes in chromatin, intracellular calcium, and poly(ADP-ribose) polymerase during Sindbis virus-induced apoptosis of neuroblastoma cells.

Authors:  S Ubol; S Park; I Budihardjo; S Desnoyers; M H Montrose; G G Poirier; S H Kaufmann; D E Griffin
Journal:  J Virol       Date:  1996-04       Impact factor: 5.103

8.  Non-invasive PET Imaging of PARP1 Expression in Glioblastoma Models.

Authors:  Brandon Carney; Giuseppe Carlucci; Beatriz Salinas; Valentina Di Gialleonardo; Susanne Kossatz; Axel Vansteene; Valerie A Longo; Alexander Bolaender; Gabriela Chiosis; Kayvan R Keshari; Wolfgang A Weber; Thomas Reiner
Journal:  Mol Imaging Biol       Date:  2016-06       Impact factor: 3.488

9.  Efficient retroviral infection of mammalian cells is blocked by inhibition of poly(ADP-ribose) polymerase activity.

Authors:  J A Gäken; M Tavassoli; S U Gan; S Vallian; I Giddings; D C Darling; J Galea-Lauri; M G Thomas; H Abedi; V Schreiber; J Ménissier-de Murcia; M K Collins; S Shall; F Farzaneh
Journal:  J Virol       Date:  1996-06       Impact factor: 5.103

10.  Purification and characterization of NAD+:ADP-ribosyltransferase (polymerizing) from Dictyostelium discoideum.

Authors:  B Kofler; E Wallraff; H Herzog; R Schneider; B Auer; M Schweiger
Journal:  Biochem J       Date:  1993-07-01       Impact factor: 3.857

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