Literature DB >> 21088028

GSearcher: agile attribute querying for biological networks.

Gang Su1, Brian D Athey, Fan Meng.   

Abstract

SUMMARY: GSearcher provides a highly interactive user experience in navigating attribute data associated with large and complex biological networks. The user may either perform a quick search using keywords, phrases or regular expressions, or build a complex query with a group of filters for efficient and flexible exploration of large datasets. AVAILABILITY: http://brainarray.mbni.med.umich.edu/gsearcher/.

Entities:  

Mesh：

Year:  2010        PMID： 21088028      PMCID： PMC2995125          DOI： 10.1093/bioinformatics/btq597

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  3 in total

1.  Cytoscape: a software environment for integrated models of biomolecular interaction networks.

Authors:  Paul Shannon; Andrew Markiel; Owen Ozier; Nitin S Baliga; Jonathan T Wang; Daniel Ramage; Nada Amin; Benno Schwikowski; Trey Ideker
Journal:  Genome Res       Date:  2003-11       Impact factor: 9.043

2.  Cytoscape ESP: simple search of complex biological networks.

Authors:  Maital Ashkenazi; Gary D Bader; Allan Kuchinsky; Menachem Moshelion; David J States
Journal:  Bioinformatics       Date:  2008-04-28       Impact factor: 6.937

3.  Michigan molecular interactions r2: from interacting proteins to pathways.

Authors:  V Glenn Tarcea; Terry Weymouth; Alex Ade; Aaron Bookvich; Jing Gao; Vasudeva Mahavisno; Zach Wright; Adriane Chapman; Magesh Jayapandian; Arzucan Ozgür; Yuanyuan Tian; Jim Cavalcoli; Barbara Mirel; Jignesh Patel; Dragomir Radev; Brian Athey; David States; H V Jagadish
Journal:  Nucleic Acids Res       Date:  2008-10-31       Impact factor: 16.971
  3 in total
  1 in total

1.  Open Agile text mining for bioinformatics: the PubAnnotation ecosystem.

Authors:  Jin-Dong Kim; Yue Wang; Toyofumi Fujiwara; Shujiro Okuda; Tiffany J Callahan; K Bretonnel Cohen
Journal:  Bioinformatics       Date:  2019-11-01       Impact factor: 6.937
  1 in total

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